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Maladies Infectieuses et Vecteurs : Ecologie Génétique Evolution et Contrôle: Montpellier, Occitanie, FR

Directeur de Recherche
Employment
Source: Self-asserted source
Yannis Michalakis

Works (50 of 120)

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Page 1 of 3

Replication mechanisms of circular ssDNA plant viruses and their potential implication in viral gene expression regulation

mBio
2023-09-11 | Journal article
DOI: 10.1128/mbio.01692-23
Part of ISSN: 2150-7511
Contributors: Mélia Bonnamy; Stéphane Blanc; Yannis Michalakis; Vinayaka R. Prasad
Source: Self-asserted source
Yannis Michalakis via Crossref Metadata Search

Nonconcomitant host-to-host transmission of multipartite virus genome segments may lead to complete genome reconstitution

Proceedings of the National Academy of Sciences
2022-08 | Journal article
DOI: 10.1073/pnas.2201453119
Part of ISSN: 0027-8424
Contributors: Jérémy Di Mattia; Babil Torralba; Michel Yvon; Jean-Louis Zeddam; Stéphane Blanc; Yannis Michalakis
Source: Self-asserted source
Yannis Michalakis via Crossref Metadata Search

Gene copy number variations at the within-host population level modulate gene expression in a multipartite virus

Virus Evolution
2022-06 | Journal article
DOI: 10.1093/ve/veac058
Part of ISSN: 2057-1577
Contributors: Romain Gallet; Jérémy Di Mattia; Sébastien Ravel; Jean-Louis Zeddam; Renaud Vitalis; Yannis Michalakis; Stéphane Blanc
Source: Self-asserted source
Yannis Michalakis via Crossref Metadata Search

Early phylodynamics analysis of the COVID-19 epidemic in France

Peer Community Journal
2021-11 | Journal article
DOI: 10.24072/pcjournal.40
Part of ISSN: 2804-3871
Contributors: Gonché Danesh; Baptiste Elie; Yannis Michalakis; Mircea T Sofonea; Antonin Bal; Sylvie Behillil; Grégory Destras; David Boutolleau; Sonia Burrel; Anne-Geneviève Marcelin et al.
Source: Self-asserted source
Yannis Michalakis via Crossref Metadata Search

SARS-CoV-2 viral RNA levels are not 'viral load'

Trends in Microbiology
2021-11 | Journal article
DOI: 10.1016/j.tim.2021.08.008
Part of ISSN: 0966-842X
Contributors: Yannis Michalakis; Mircea T. Sofonea; Samuel Alizon; Ignacio G. Bravo
Source: Self-asserted source
Yannis Michalakis via Crossref Metadata Search

Memory is key in capturing COVID-19 epidemiological dynamics

Epidemics
2021-06 | Journal article
DOI: 10.1016/j.epidem.2021.100459
Part of ISSN: 1755-4365
Contributors: Mircea T. Sofonea; Bastien Reyné; Baptiste Elie; Ramsès Djidjou-Demasse; Christian Selinger; Yannis Michalakis; Samuel Alizon
Source: Self-asserted source
Yannis Michalakis via Crossref Metadata Search

Two waves and a high tide: the COVID-19 epidemic in France

Anaesthesia Critical Care & Pain Medicine
2021-06 | Journal article
DOI: 10.1016/j.accpm.2021.100881
Part of ISSN: 2352-5568
Contributors: Mircea T. Sofonea; Corentin Boennec; Yannis Michalakis; Samuel Alizon
Source: Self-asserted source
Yannis Michalakis via Crossref Metadata Search

Detecting Rapid Spread of SARS-CoV-2 Variants, France, January 26–February 16, 2021

Emerging Infectious Diseases
2021-05 | Journal article
DOI: 10.3201/eid2705.210397
Part of ISSN: 1080-6040
Contributors: Stéphanie Haim-Boukobza; Bénédicte Roquebert; Sabine Trombert-Paolantoni; Emmanuel Lecorche; Laura Verdurme; Vincent Foulongne; Christian Selinger; Yannis Michalakis; Mircea T. Sofonea; Samuel Alizon
Source: Self-asserted source
Yannis Michalakis via Crossref Metadata Search

Route of a Multipartite Nanovirus across the Body of Its Aphid Vector

Journal of Virology
2020-02-26 | Journal article
DOI: 10.1128/jvi.01998-19
Part of ISSN: 0022-538X
Part of ISSN: 1098-5514
Source: Self-asserted source
Yannis Michalakis

A multicellular way of life for a multipartite virus

eLife
2019 | Journal article
DOI: 10.7554/eLife.43599
EID:

2-s2.0-85062857255
Contributors: Sicard, A.; Pirolles, E.; Gallet, R.; Vernerey, M.-S.; Yvon, M.; Urbino, C.; Peterschmitt, M.; Gutierrez, S.; Michalakis, Y.; Blanc, S.
Source: Self-asserted source
Yannis Michalakis via Scopus - Elsevier

Editorial overview: Multicomponent viral systems.

Current opinion in virology
2018-12 | Journal article
DOI: 10.1016/j.coviro.2018.11.009
PMID: 30527269
Contributors: Michalakis Y; Blanc S
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Vector-transmission of plant viruses and constraints imposed by virus-vector interactions.

Current opinion in virology
2018-09 | Journal article
DOI: 10.1016/j.coviro.2018.08.005
PMID: 30223172
Contributors: Gallet R; Michalakis Y; Blanc S
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Decomposing parasite fitness reveals the basis of specialization in a two-host, two-parasite system.

Evolution letters
2018-07 | Journal article
DOI: 10.1002/evl3.65
PMID: 30283690
PMC: PMC6121826
Contributors: Lievens EJP; Perreau J; Agnew P; Michalakis Y; Lenormand T
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Small Bottleneck Size in a Highly Multipartite Virus during a Complete Infection Cycle.

Journal of virology
2018-06 | Journal article
DOI: 10.1128/JVI.00139-18
PMID: 29720515
PMC: PMC6026758
Contributors: Gallet R; Fabre F; Thébaud G; Sofonea MT; Sicard A; Blanc S; Michalakis Y
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Long-term prevalence data reveals spillover dynamics in a multi-host (Artemia), multi-parasite (Microsporidia) community

2018-01 | Other
DOI: 10.1101/248542
OTHER-ID:

PPR19806
Contributors: Lievens EJP; Rode NO; Landes J; Segard A; Jabbour-Zahab R; Michalakis Y; Lenormand T
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Why multiple infections favour virulent parasites

2018-01 | Other
DOI: 10.1101/258004
OTHER-ID:

PPR19228
Contributors: Sofonea MT; Alizon S; Michalakis Y
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

The number of target molecules of the amplification step limits accuracy and sensitivity in ultra deep sequencing viral population studies.

Journal of virology
2017-05 | Journal article
DOI: 10.1128/JVI.00561-17
PMID: 28566384
PMC: PMC5533907
Contributors: Gallet R; Fabre F; Michalakis Y; Blanc S
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Exposing the diversity of multiple infection patterns.

Journal of theoretical biology
2017-02 | Journal article
DOI: 10.1016/j.jtbi.2017.02.011
PMID: 28193485
Contributors: Sofonea MT; Alizon S; Michalakis Y
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

The Strange Lifestyle of Multipartite Viruses.

PLoS pathogens
2016-11 | Journal article
DOI: 10.1371/journal.ppat.1005819
PMID: 27812219
PMC: PMC5094692
Contributors: Sicard A; Michalakis Y; Gutiérrez S; Blanc S
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Maladaptive Sex Ratio Adjustment in the Invasive Brine Shrimp Artemia franciscana.

Current biology : CB
2016-05 | Journal article
DOI: 10.1016/j.cub.2016.03.074
PMID: 27185556
Contributors: Lievens EJ; Henriques GJ; Michalakis Y; Lenormand T
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Manipulation of hosts and vectors by plant viruses and impact of the environment.

Current opinion in insect science
2016-05 | Journal article
DOI: 10.1016/j.cois.2016.05.007
PMID: 27720048
Contributors: Blanc S; Michalakis Y
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Comment on "Large Bottleneck Size in Cauliflower Mosaic Virus Populations during Host Plant Colonization" by Monsion et al. (2008).

PLoS pathogens
2016-04 | Journal article
DOI: 10.1371/journal.ppat.1005512
PMID: 27078639
PMC: PMC4831687
Contributors: Thébaud G; Michalakis Y
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

From within-host interactions to epidemiological competition: a general model for multiple infections.

Philosophical transactions of the Royal Society of London. Series B, Biological sciences
2015-08 | Journal article
DOI: 10.1098/rstb.2014.0303
PMID: 26150669
PMC: PMC4528501
Contributors: Sofonea MT; Alizon S; Michalakis Y
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Circulative Nonpropagative Aphid Transmission of Nanoviruses: an Oversimplified View.

Journal of virology
2015-07 | Journal article
DOI: 10.1128/JVI.00780-15
PMID: 26178991
PMC: PMC4577921
Contributors: Sicard A; Zeddam JL; Yvon M; Michalakis Y; Gutiérrez S; Blanc S
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

The Multiplicity of Cellular Infection Changes Depending on the Route of Cell Infection in a Plant Virus.

Journal of virology
2015-07 | Journal article
DOI: 10.1128/JVI.00537-15
PMID: 26178988
PMC: PMC4542342
Contributors: Gutiérrez S; Pirolles E; Yvon M; Baecker V; Michalakis Y; Blanc S
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Adaptive virulence evolution: the good old fitness-based approach.

Trends in ecology & evolution
2015-03 | Journal article
DOI: 10.1016/j.tree.2015.02.009
PMID: 25837917
Contributors: Alizon S; Michalakis Y
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

The consequences of co-infections for parasite transmission in the mosquito Aedes aegypti.

The Journal of animal ecology
2014-11 | Journal article
DOI: 10.1111/1365-2656.12302
PMID: 25311642
Contributors: Duncan AB; Agnew P; Noel V; Michalakis Y
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Sex in an uncertain world: environmental stochasticity helps restore competitive balance between sexually and asexually reproducing populations.

Journal of evolutionary biology
2014-05 | Journal article
DOI: 10.1111/jeb.12419
PMID: 24836646
Contributors: Park AW; Vandekerkhove J; Michalakis Y
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Stress dependent infection cost of the human malaria agent Plasmodium falciparum on its natural vector Anopheles coluzzii.

Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases
2014-04 | Journal article
DOI: 10.1016/j.meegid.2014.04.006
PMID: 24747607
Contributors: Sangare I; Dabire R; Yameogo B; Da DF; Michalakis Y; Cohuet A
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Reduced survival and reproductive success generates selection pressure for the dengue mosquito Aedes aegypti to evolve resistance against infection by the microsporidian parasite Vavraia culicis.

Evolutionary applications
2014-02 | Journal article
DOI: 10.1111/eva.12144
PMID: 24822081
PMC: PMC4001445
Contributors: Sy VE; Agnew P; Sidobre C; Michalakis Y
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Mate recognition as a reproductive barrier in sexual and parthenogenetic Eucypris virens (Crustacea, Ostracoda)

Animal Behaviour
2013 | Journal article
DOI: 10.1016/j.anbehav.2013.02.021
EID:

2-s2.0-84877620905
Contributors: Schmit, O.; Fukova, I.; Vandekerkhove, J.; Michalakis, Y.; Matzke-Karasz, R.; Rossetti, G.; Martens, K.; Mesquita-Joanes, F.
Source: Self-asserted source
Yannis Michalakis via Scopus - Elsevier

Plant feeding by insect vectors can affect life cycle, population genetics and evolution of plant viruses

Functional Ecology
2013 | Journal article
DOI: 10.1111/1365-2435.12070
EID:

2-s2.0-84878211755
Contributors: Gutiérrez, S.; Michalakis, Y.; Van Munster, M.; Blanc, S.
Source: Self-asserted source
Yannis Michalakis via Scopus - Elsevier

The distribution of sexual reproduction of the geographic parthenogen Eucypris virens (Crustacea: Ostracoda) matches environmental gradients in a temporary lake

Canadian Journal of Zoology
2013 | Journal article
DOI: 10.1139/cjz-2012-0236
EID:

2-s2.0-84884470908
Contributors: Schmit, O.; Adolfsson, S.; Vandekerkhove, J.; Rueda, J.; Bode, S.N.S.; Rossetti, G.; Michalakis, Y.; Jokela, J.; Martens, K.; Mesquita-Joanes, F.
Source: Self-asserted source
Yannis Michalakis via Scopus - Elsevier

Damped long-term host-parasite Red Queen coevolutionary dynamics: a reflection of dilution effects?

Ecology letters
2013-10 | Journal article
DOI: 10.1111/ele.12186
PMID: 24118657
Contributors: Decaestecker E; De Gersem H; Michalakis Y; Raeymaekers JA
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Cytological, molecular and life cycle characterization of Anostracospora rigaudi n. g., n. sp. and Enterocytospora artemiae n. g., n. sp., two new microsporidian parasites infecting gut tissues of the brine shrimp Artemia.

Parasitology
2013-06 | Journal article
DOI: 10.1017/s0031182013000668
PMID: 23731593
Contributors: Rode NO; Landes J; Lievens EJ; Flaven E; Segard A; Jabbour-Zahab R; Michalakis Y; Agnew P; Vivarès CP; Lenormand T
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Reduction of leaf area and symptom severity as proxies of disease-induced plant mortality: the example of the Cauliflower mosaic virus infecting two Brassicaceae hosts.

Virus research
2013-06 | Journal article
DOI: 10.1016/j.virusres.2013.05.008
PMID: 23742852
Contributors: Doumayrou J; Leblaye S; Froissart R; Michalakis Y
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Gene copy number is differentially regulated in a multipartite virus.

Nature communications
2013-01 | Journal article
DOI: 10.1038/ncomms3248
PMID: 23912259
Contributors: Sicard A; Yvon M; Timchenko T; Gronenborn B; Michalakis Y; Gutierrez S; Blanc S
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Multiple infections and the evolution of virulence.

Ecology letters
2013-01 | Journal article
DOI: 10.1111/ele.12076
PMID: 23347009
Contributors: Alizon S; de Roode JC; Michalakis Y
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Studying fitness cost of Plasmodium falciparum infection in malaria vectors: validation of an appropriate negative control.

Malaria journal
2013-01 | Journal article
DOI: 10.1186/1475-2875-12-2
PMID: 23282172
PMC: PMC3543248
Contributors: Sangare I; Michalakis Y; Yameogo B; Dabire R; Morlais I; Cohuet A
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Circulating virus load determines the size of bottlenecks in viral populations progressing within a host.

PLoS pathogens
2012-11 | Journal article
DOI: 10.1371/journal.ppat.1003009
PMID: 23133389
PMC: PMC3486874
Contributors: Gutiérrez S; Yvon M; Pirolles E; Garzo E; Fereres A; Michalakis Y; Blanc S
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

An experimental test of the transmission-virulence trade-off hypothesis in a plant virus.

Evolution; international journal of organic evolution
2012-09 | Journal article
DOI: 10.1111/j.1558-5646.2012.01780.x
PMID: 23356619
Contributors: Doumayrou J; Avellan A; Froissart R; Michalakis Y
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Virus population bottlenecks during within-host progression and host-to-host transmission.

Current opinion in virology
2012-08 | Journal article
DOI: 10.1016/j.coviro.2012.08.001
PMID: 22921636
Contributors: Gutiérrez S; Michalakis Y; Blanc S
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Proteome of Aedes aegypti in response to infection and coinfection with microsporidian parasites.

Ecology and evolution
2012-04 | Journal article
DOI: 10.1002/ece3.199
PMID: 22837817
PMC: PMC3399191
Contributors: Duncan AB; Agnew P; Noel V; Demettre E; Seveno M; Brizard JP; Michalakis Y
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Mitochondrial cluster-specific genome size variability among sexual and asexual lineages of the ostracod Eucypris virens species group

Joannea - Geologie und Palaontologie
2011 | Journal article
EID:

2-s2.0-80053292667
Contributors: Adolfsson, S.; Lamatsch, D.K.; Paczesniak, D.; Michalakis, Y.; Martens, K.; Schön, I.; Butlin, R.K.; Jokela, J.
Source: Self-asserted source
Yannis Michalakis via Scopus - Elsevier

The transmission-virulence trade-off and superinfection: comments to Smith.

Evolution; international journal of organic evolution
2011-09 | Journal article
DOI: 10.1111/j.1558-5646.2011.01432.x
PMID: 22133231
Contributors: Alizon S; Michalakis Y
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Inclusive fitness theory and eusociality.

Nature
2011-03 | Journal article
DOI: 10.1038/nature09831
PMID: 21430721
PMC: PMC3836173
Contributors: Abbot P; Abe J; Alcock J; Alizon S; Alpedrinha JA; Andersson M; Andre JB; van Baalen M; Balloux F; Balshine S et al.
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Corrigendum

Molecular Ecology Resources
2010 | Journal article
DOI: 10.1111/j.1755-0998.2010.02870.x
EID:

2-s2.0-77954698563
Contributors: Chapuis, M.-P.; Loiseau, A.; Michalakis, Y.; Lecoq, M.; Estoup, A.
Source: Self-asserted source
Yannis Michalakis via Scopus - Elsevier

Dynamics of the multiplicity of cellular infection in a plant virus.

PLoS pathogens
2010-09 | Journal article
DOI: 10.1371/journal.ppat.1001113
PMID: 20862320
PMC: PMC2940754
Contributors: Gutiérrez S; Yvon M; Thébaud G; Monsion B; Michalakis Y; Blanc S
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

The virulence-transmission trade-off in vector-borne plant viruses: a review of (non-)existing studies.

Philosophical transactions of the Royal Society of London. Series B, Biological sciences
2010-06 | Journal article
DOI: 10.1098/rstb.2010.0068
PMID: 20478886
PMC: PMC2880117
Contributors: Froissart R; Doumayrou J; Vuillaume F; Alizon S; Michalakis Y
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central

Parasites and deleterious mutations: interactions influencing the evolutionary maintenance of sex.

Journal of evolutionary biology
2010-03 | Journal article
DOI: 10.1111/j.1420-9101.2010.01972.x
PMID: 20345815
Contributors: Park AW; Jokela J; Michalakis Y
Source: Self-asserted source
Yannis Michalakis via Europe PubMed Central
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