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Works (17)

Multivariate Bayesian variable selection for multi-trait genetic fine mapping

Journal of the Royal Statistical Society Series C: Applied Statistics
2025-03-13 | Journal article
DOI: 10.1093/jrsssc/qlae055
Contributors: Travis Canida; Hongjie Ke; Shuo Chen; Zhenyao Ye; Tianzhou Ma
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Crossref

Tobacco Smoking Functional Networks: A Whole-Brain Connectome Analysis in 24 539 Individuals

Nicotine and Tobacco Research
2024-10-28 | Journal article
DOI: 10.1093/ntr/ntae256
Contributors: Yezhi Pan; Chuan Bi; Zhenyao Ye; Hwiyoung Lee; Jiaao Yu; Luba Yammine; Tianzhou Ma; Peter Kochunov; L Elliot Hong; Shuo Chen
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Crossref

Nongenetic and Genetic Factors Associated with White Matter Brain Aging: Exposome-Wide and Genome-Wide Association Study

Genes
2024-09 | Journal article | Author
DOI: 10.3390/genes15101285
Contributors: Li Feng; Halley S. Milleson; Zhenyao Ye; Travis Canida; Hongjie Ke; menglu liang; Si Gao; Shuo Chen; L. Elliot Hong; Peter Kochunov et al.
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Multidisciplinary Digital Publishing Institute

TIPS: a novel pathway-guided joint model for transcriptome-wide association studies

Briefings in Bioinformatics
2024-09-23 | Journal article
DOI: 10.1093/bib/bbae587
Contributors: Neng Wang; Zhenyao Ye; Tianzhou Ma
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Crossref

Influenza A (H3) viral aerosol shedding in nasally inoculated and naturally infected cases

2024-09-10 | Preprint
DOI: 10.1101/2024.09.09.24313370
Contributors: Jianyu Lai; P. Jacob Bueno de Mesquita; Filbert Hong; Tianzhou Ma; Benjamin J. Cowling; Donald K. Milton
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Crossref

dCCA: detecting differential covariation patterns between two types of high-throughput omics data

Briefings in Bioinformatics
2024-05-23 | Journal article
DOI: 10.1093/bib/bbae288
Contributors: Hwiyoung Lee; Tianzhou Ma; Hongjie Ke; Zhenyao Ye; Shuo Chen
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Crossref

Bayesian response adaptive randomization design with a composite endpoint of mortality and morbidity

Statistics in Medicine
2024-03-15 | Journal article
DOI: 10.1002/sim.10014
Contributors: Zhongying Xu; Tianzhou Ma; Lu Tang; Victor B. Talisa; Chung‐Chou H. Chang
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Crossref

A site-wise reliability analysis of the ABCD diffusion fractional anisotropy and cortical thickness: impact of scanner platforms

2024-02-23 | Preprint
DOI: 10.1101/2024.02.21.581460
Contributors: Yezhi Pan; L. Elliot Hong; Ashley Acheson; Paul M. Thompson; Neda Jahanshad; Alyssa H. Zhu; Jiaao Yu; Chixiang Chen; Tianzhou Ma; Ho-Ling Liu et al.
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Crossref

High-dimension to high-dimension screening for detecting genome-wide epigenetic and noncoding RNA regulators of gene expression

Bioinformatics
2022-09-02 | Journal article
DOI: 10.1093/bioinformatics/btac518
Contributors: Hongjie Ke; Zhao Ren; Jianfei Qi; Shuo Chen; George C Tseng; Zhenyao Ye; Tianzhou Ma; Can Alkan
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Crossref

A statistical framework for recovering pseudo-dynamic networks from static data

Bioinformatics
2022-04-28 | Journal article
DOI: 10.1093/bioinformatics/btac038
Contributors: Chixiang Chen; Biyi Shen; Tianzhou Ma; Ming Wang; Rongling Wu; Olga Vitek
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Crossref

High-dimension to high-dimension screening for detecting genome-wide epigenetic regulators of gene expression

2022-02-22 | Preprint
DOI: 10.1101/2022.02.21.481160
Contributors: Hongjie Ke; Zhao Ren; Shuo Chen; George C Tseng; Jianfei Qi; Tianzhou Ma
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Crossref

Meta-Analysis of Transcriptome-Wide Association Studies across 13 Brain Tissues Identified Novel Clusters of Genes Associated with Nicotine Addiction

Genes
2021-12-23 | Journal article
DOI: 10.3390/genes13010037
Contributors: Zhenyao Ye; Chen Mo; Hongjie Ke; Qi Yan; Chixiang Chen; Peter Kochunov; L. Elliot Hong; Braxton D. Mitchell; Shuo Chen; Tianzhou Ma
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Crossref
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Preferred source (of 2)‎

Meta-Analysis of Transcriptome-Wide Association Studies Across 13 Brain Tissues Identified Novel Clusters of Genes Associated with Nicotine Addiction

2021-11-22 | Preprint
DOI: 10.20944/preprints202111.0386.v1
Contributors: Zhenyao Ye; Chen Mo; Hongjie Ke; Qi Yan; Chixiang Chen; Elliot L Hong; Peter Kochunov; Braxton D Mitchell; Shuo Chen; Tianzhou Ma
Source: check_circle
Crossref

A multivariate to multivariate approach for voxel-wise genome-wide association analysis

2021-11-04 | Other
DOI: 10.1101/2021.11.02.467021
Contributors: Qiong Wu; Yuan Zhang; Xiaoqi Huang; Tianzhou Ma; L. Elliot Hong; Peter Kochunov; Shuo Chen
Source: check_circle
Crossref

ICN: extracting interconnected communities in gene co-expression networks

Bioinformatics
2021-08-04 | Journal article
DOI: 10.1093/bioinformatics/btab047
Contributors: Qiong Wu; Tianzhou Ma; Qingzhi Liu; Donald K Milton; Yuan Zhang; Shuo Chen; Anthony Mathelier
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Crossref

Genetic Fine-mapping with Dense Linkage Disequilibrium Blocks: genetics of nicotine dependence

2020-12-11 | Preprint
DOI: 10.1101/2020.12.10.420216
Contributors: Chen Mo; Zhenyao Ye; Kathryn Hatch; Yuan Zhang; Qiong Wu; Song Liu; Peter Kochunov; L. Elliot Hong; Tianzhou Ma; Shuo Chen
Source: check_circle
Crossref

MetaOmics: analysis pipeline and browser-based software suite for transcriptomic meta-analysis

Bioinformatics
2019-05-01 | Journal article
DOI: 10.1093/bioinformatics/bty825
Contributors: Tianzhou Ma; Zhiguang Huo; Anche Kuo; Li Zhu; Zhou Fang; Xiangrui Zeng; Chien-Wei Lin; Silvia Liu; Lin Wang; Peng Liu et al.
Source: check_circle
Crossref

Peer review (5 reviews for 5 publications/grants)

Review activity for Molecular psychiatry. (1)
Review activity for Nature aging. (1)
Review activity for Nature communications (1)
Review activity for PLoS computational biology. (1)
Review activity for PloS one. (1)
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