Personal information

Biography

EDUCATION

2007 PhD: Disputation date: 27.07.2007.

University of Heidelberg, Max Planck Institute for Medical Research, Germany

2003 M.Sc.

University of Heidelberg, Max Planck Institute for Medical Research, Germany

2001 Bsc

Middle East Technical University, Turkey



CURRENT AND PREVIOUS POSITIONS

Since 2017 Current Position

Professor, Kavli Institute for Systems neuroscience, NTNU, Trondheim, Norway

Director of the NTNU Master program in Neuroscience

2015 – 2017 Associate Professor, Kavli Institute for Systems neuroscience, NTNU, Trondheim, Norway

2011- 2016 Assistant Professor, Faculty of Medicine, Dept. of Neurophysiology, KULeuven, Belgium

2010 -2016 Group Leader, Neuroelectronics Research Flanders, VIB, Belgium

2013 -2014 Interim Department Director, Neuroelectronics Research Flanders, VIB, Belgium

2007- 2010 Post-doctoral Researcher, Harvard Medical School, Department of Neurobiology, USA



FELLOWSHIPS, GRANTS AND AWARDS

2016 Mid-Norway regional health authorities research grant (8M NOK)

2015 Norwegian research council FRIPRO BIOMED young talent grant (7M NOK)

2015 Association for Chemoreception Sciences (AChemS) Young investigator award 2015

2014 Selected for FENS/Kavli Network of Excellence

2014 Federation of European Neuroscience Young Investigator Prize 2014

2013 European Research Commission (ERC) starting investigator grant (1.5M Euros)

2008-2010: Human Frontiers Science Program, Long-term Postdoctoral Fellowship, USA

2006 Marine Biological Laboratories, Neural Systems & Behavior Summer Course, USA

2003-2006 Boehringer Ingelheim Fonds Fellowship, Heidelberg, Germany

2002-2003 Scholarship of Max Planck Society, Heidelberg, Germany

2001-2002 Msc Scholarship of DAAD (German Academic Exchange Service), Germany

1996-2001 Scholarship of TUBITAK (Turkish Science & Technology Association), Turkey



SUPERVISION OF GRADUATE STUDENTS AND RESEARCH FELLOWS

Post-docs

Starting November 2017: Dr Laetitia Lalla
Since September 2017: Dr Daniela Weth
Since September 2015: Dr Pradeep Lal (Marie Curie Fellowship)
Since September 2012: Dr Florence Kermen (Fyssens Fellowship, FIRPRO YI grant)
Graduated March 2017: Dr Filip Janiak
Graduated June 2015: Dr Cameron Wyatt (AXA Postdoctoral Fellowship)
Graduated June 2013: Dr Elena Dreosti (Sir Henry Wellcome Fellowships)

PhD Students

Since January 2017: Sverre Myren-Svelstad (samarbeidsorganet – Helse Midt-Norge)
Since February 2015: Robrecht Pelgrims
Since January 2015: Ewelina Bartoszek
Since September 2013: Stephanie Fore
will graduate Nov 2016: Carmen Verdugo Diaz
Graduated October 2016: Luis Mendez Franco (VIB PhD Student Fellowship)
Graduated November 2015: Suresh Kumar Jetti (Boehringer Ingelheim Fond Fellowship)
Graduated March 2015: Nuria Vendrell Llopis



TEACHING ACTIVITIES

Since 2017 General Coordinator for the Masters in Neuroscience Program at NTNU

2016 Coordinator for the Masters in Neuroscience Program, Systems Neuroscience course

2013 Teaching and practical training during FLIACT workshop Jena, Marie Curie initial training network

2012-2013 Career guidance and teaching at VIB/NERF/KULeuven PhD School



ORGANISATION OF SCIENTIFIC MEETINGS

2012-2013-2014 NERF, Neuro-technology Symposium, organizer

2012 VIB/NERF Neuroscience Summer School, co-organizer

2016 NRSN Summer School for Systems Neuroscience, organizer

2016 Kavli Prize Neuroscience Symposium, co-organizer

2017 FENS/Kavli Network Symposium, co-organizer



INSTITUTIONAL RESPONSIBILITIES

2013 Interim Department Director for 1 year

Neuroelectronics Research Flanders/ VIB/ Belgium



COMMISSIONS OF TRUST

Referee service: Nature, Nature Methods, Nature Neuroscience, Current Biology, Journal of Neuroscience, Frontiers in Neural Circuits, Neuron, PLOS One, Behavioural Brain Research, EMBO Reports, Journal of Comparative Neurology, BMC Neuroscience,



MEMBERSHIPS OF SCIENTIFIC SOCIETIES

Since 2015 FENS/Kavli Network of Excellence

Since 2015 Federation of European Neuroscience

Since 2015 Norwegian Neuroscience Society

Since 2016 Society for Neuroscience

Activities

Works (19)

Topographically organized dorsal raphe activity modulates forebrain sensory-motor computations and adaptive behaviors

2025-03-06 | Preprint
Contributors: Aytac Kadir Mutlu; Bram Serneels; Christoph Wiest; Anh-Tuan Trinh; Ricarda Bardenhewer; Fabrizio Palumbo; Oda Bjørnevik Frisvold; Inger Kristine Fjeldskaar Aukrust; Anna Maria Ostenrath; Emre Yaksi
Source: check_circle
Crossref

Cilia-mediated cerebrospinal fluid flow modulates neuronal and astroglial activity in the zebrafish larval brain

2024-02-02 | Preprint
Contributors: Percival P. D’Gama; Inyoung Jeong; Andreas Moe Nygård; Ahmed Jamali; Emre Yaksi; Nathalie Jurisch-Yaksi
Source: check_circle
Crossref

Loss of cilia after neurulation impacts brain development and neuronal activity in larval zebrafish

2023-09-21 | Preprint
Contributors: Percival P. D’Gama; Inyoung Jeong; Andreas Moe Nygård; Anh-Tuan Trinh; Emre Yaksi; Nathalie Jurisch-Yaksi
Source: check_circle
Crossref

Cover Image, Volume 70, Issue 1

Glia
2022-01 | Journal article
Contributors: Adriana L. Hotz; Ahmed Jamali; Nicolas N. Rieser; Stephanie Niklaus; Ecem Aydin; Sverre Myren‐Svelstad; Laetitia Lalla; Nathalie Jurisch‐Yaksi; Emre Yaksi; Stephan C. F. Neuhauss
Source: check_circle
Crossref

Loss of glutamate transporter eaat2a leads to aberrant neuronal excitability, recurrent epileptic seizures, and basal hypoactivity

Glia
2022-01 | Journal article
Contributors: Adriana L. Hotz; Ahmed Jamali; Nicolas N. Rieser; Stephanie Niklaus; Ecem Aydin; Sverre Myren‐Svelstad; Laetitia Lalla; Nathalie Jurisch‐Yaksi; Emre Yaksi; Stephan C. F. Neuhauss
Source: check_circle
Crossref

Elevated photic response is followed by a rapid decay and depressed state in ictogenic networks

2022-01-31 | Preprint
Contributors: Sverre Myren-Svelstad; Ahmed Jamali; Sunniva S. Ophus; Anna M. Ostenrath; Kadir Aytac Mutlu; Helene Homme Hoffshagen; Adriana L. Hotz; Stephan C.F. Neuhauss; Nathalie Jurisch-Yaksi; Emre Yaksi
Source: check_circle
Crossref

Past, present and future of zebrafish in epilepsy research

The FEBS Journal
2021-12 | Journal article
Contributors: Emre Yaksi; Ahmed Jamali; Carmen Diaz Verdugo; Nathalie Jurisch‐Yaksi
Source: check_circle
Crossref

Optimized protocol for conditioned place avoidance learning in juvenile zebrafish

STAR Protocols
2021-06 | Journal article
Contributors: Fabrizio Palumbo; Bram Serneels; Emre Yaksi
Source: check_circle
Crossref

Experience-dependent plasticity modulates ongoing activity in the antennal lobe and enhances odor representations

2021-04-29 | Preprint
Contributors: Luis M. Franco; Emre Yaksi
Source: check_circle
Crossref

Loss of glutamate transportereaat2aleads to aberrant neuronal excitability, recurrent epileptic seizures and hypoactivity

2021-03-17 | Preprint
Contributors: Adriana L. Hotz; Ahmed Jamali; Nicolas N. Rieser; Stephanie Niklaus; Ecem Aydin; Sverre Myren-Svelstad; Laetitia Lalla; Nathalie Jurisch-Yaksi; Emre Yaksi; Stephan C.F. Neuhauss
Source: check_circle
Crossref

Ongoing habenular activity is driven by forebrain networks and modulated by olfactory stimuli

2021-02-14 | Preprint
Contributors: Ewelina Magdalena Bartoszek; Suresh Kumar Jetti; Khac Thanh Phong Chau; Emre Yaksi
Source: check_circle
Crossref

Radial glia in the zebrafish brain: Functional, structural, and physiological comparison with the mammalian glia

Glia
2020-12 | Journal article
Contributors: Nathalie Jurisch‐Yaksi; Emre Yaksi; Caghan Kizil
Source: check_circle
Crossref

What brains do we study and why do we study them?

European Journal of Neuroscience
2020-12 | Journal article
Contributors: Emre Yaksi; Carmen Sandi
Source: check_circle
Crossref

The Zebrafish Dorsolateral Habenula Is Required for Updating Learned Behaviors

Cell Reports
2020-08 | Journal article
Contributors: Fabrizio Palumbo; Bram Serneels; Robbrecht Pelgrims; Emre Yaksi
Source: check_circle
Crossref

Interhemispheric connections between olfactory bulbs improve odor detection

PLOS Biology
2020-04-20 | Journal article
Contributors: Florence Kermen; Richard Benton; Pradeep Lal; Nicholas G. Faturos; Emre Yaksi
Source: check_circle
Crossref

Investigating olfactory behaviors in adult zebrafish

2019-11-29 | Other
Contributors: Florence Kermen; Lea Darnet; Christoph Wiest; Fabrizio Palumbo; Jack Bechert; Ozge Uslu; Emre Yaksi
Source: check_circle
Crossref

The zebrafish dorsolateral habenula is required for updating learned behaviors

2019-10-13 | Other
Contributors: Fabrizio Palumbo; Bram Serneels; Robbrecht Pelgrims; Emre Yaksi
Source: check_circle
Crossref

Interhemispheric connections between olfactory bulbs improve odor detection

2019-09-12 | Other
Contributors: Florence Kermen; Emre Yaksi
Source: check_circle
Crossref

Functional properties of habenular neurons are determined by developmental stage and sequential neurogenesis

2019-08-01 | Other
Contributors: Stephanie Fore; Mehmet Ilyas Cosacak; Carmen Diaz Verdugo; Caghan Kizil; Emre Yaksi
Source: check_circle
Crossref

Peer review (25 reviews for 11 publications/grants)

Review activity for BMC biology. (1)
Review activity for Cell and tissue research. (1)
Review activity for Current biology. (7)
Review activity for eLife (2)
Review activity for ENeuro. (1)
Review activity for Molecular neurobiology. (1)
Review activity for Molecular psychiatry. (2)
Review activity for Nature (3)
Review activity for Nature communications (5)
Review activity for Nature neuroscience. (1)
Review activity for PLOS genetics. (1)