Personal information

No personal information available

Activities

Collapse all

Employment (2)

Brandeis University: Waltham, MA, US

William R. Kenan Jr. Professor of Physics
Employment
Source: check_circle
Brandeis University - ScholarWorks

Brandeis University: Waltham, Massachusetts, US

1999-07-01 to present | Professor (Physics)
Employment
Source: Self-asserted source
Jane Kondev

Works (50 of 63)

Items per page:
Page 1 of 2

Mechanisms of synergistic Mediator recruitment in RNA polymerase II transcription activation revealed by single-molecule fluorescence

bioRxiv
2024-12-11 | Preprint
DOI: 10.1101/2024.12.10.627625
Part of ISSN: 2692-8205
Contributors: Friedman Larry J; Kondev Jane; Buratowski Stephen; Gelles Jeff; Zhou Daniel H; Jeon Jongcheol; Farheen Nida
Source: check_circle
Brandeis University - ScholarWorks

Length control emerges from cytoskeletal network geometry

Proceedings of the National Academy of Sciences - PNAS
2024-08-13 | Journal article
DOI: 10.1073/pnas.2401816121
Part of ISSN: 0027-8424
Contributors: Goode Bruce L.; McInally Shane G.; Reading Alexander J. B.; Rosario Aldric; Jelenkovic Predrag R.; Kondev Jane
Source: check_circle
Brandeis University - ScholarWorks

Transcription templated assembly of the nucleolus in the C. elegans embryo

bioRxiv : the preprint server for biology
2024-06-06 | Preprint
DOI: 10.1101/2024.06.06.597440
Contributors: Kodan Nishant; Hussaini Rabeya; Weber Stephanie C; Kondev Jane; Mohapatra Lishibanya
Source: check_circle
Brandeis University - ScholarWorks

Length control emerges from cytoskeletal network geometry

2024-05-14 | Dataset
DOI: 10.5281/zenodo.11192888
Contributors: McInally Shane; Reading Alexander J.B.; Rosario Aldric; Jelenkovic Predrag R.; Goode Bruce; Kondev Jane
Source: check_circle
Brandeis University - ScholarWorks

Ultrasensitivity of microtubule severing due to damage repair

iScience
2024-02-16 | Journal article | Author
DOI: 10.1016/j.isci.2024.108874
Part of ISSN: 2589-0042
Contributors: Shiff Chloe E.; Jane Kondev; Mohapatra Lishibanya
Source: check_circle
Brandeis University - ScholarWorks

Models of rRNA-templated assembly of the nucleolus in the C. elegans embryo

Biophysical journal
2024-02-08 | Journal article
DOI: 10.1016/j.bpj.2023.11.3289
Part of ISSN: 0006-3495
Contributors: Hussaini Rabeya; Kodan Nishant; Weber Stephanie C.; Kondev Jane; Mohapatra Lishibanya
Source: check_circle
Brandeis University - ScholarWorks

Length control emerges from cytoskeletal network geometry

bioRxiv : the preprint server for biology
2023-11-29 | Preprint
PMID: 38076874
Contributors: McInally Shane G; Reading Alexander J B; Rosario Aldric; Jelenkovic Predrag R; Goode Bruce L; Kondev Jane
Source: check_circle
Brandeis University - ScholarWorks

RNA polymerase sliding on DNA can couple the transcription of nearby bacterial operons

Proceedings of the National Academy of Sciences - PNAS
2023-07-25 | Journal article
DOI: 10.1073/pnas.2301402120
Part of ISSN: 0027-8424
Contributors: Friedman Larry J.; Cai Anthony; Gelles Jeff; Kondev Jane; Tenenbaum Debora; Inlow Koe
Source: check_circle
Brandeis University - ScholarWorks

Recycling of bacterial RNA polymerase by the Swi2/Snf2 ATPase RapA

Proceedings of the National Academy of Sciences - PNAS
2023-07-11 | Journal article
DOI: 10.1073/pnas.2303849120
Part of ISSN: 0027-8424
Contributors: Inlow Koe; Tenenbaum Debora; Friedman Larry J.; Kondev Jane; Gelles Jeff
Source: check_circle
Brandeis University - ScholarWorks

Source data for "Recycling of Bacterial RNA Polymerase by the Swi2/Snf2 ATPase RapA"

2023-06-19 | Journal article
DOI: 10.5281/zenodo.7706033
Contributors: Inlow Koe; Tenenbaum Debora; Friedman Larry J.; Kondev Jane; Gelles Jeff
Source: check_circle
Brandeis University - ScholarWorks

Recycling of Bacterial RNA Polymerase by the Swi2/Snf2 ATPase RapA

bioRxiv.org
2023-03-24 | Preprint
DOI: 10.1101/2023.03.22.533849
Contributors: Tenenbaum Debora; Koe Inlow; Friedman Larry; Kondev Jane; Jeff Gelles
Source: check_circle
Brandeis University - ScholarWorks

RNA polymerase sliding on DNA can couple the transcription of nearby bacterial operons

bioRxiv
2023-02-10 | Preprint
DOI: 10.1101/2023.02.10.528045
Contributors: Tenenbaum Debora; Koe Inlow; Friedman Larry; Cai Anthony; Jeff Gelles; Kondev Jane
Source: check_circle
Brandeis University - ScholarWorks

Physics of Life

2022 | Book
DOI: 10.17226/26403
Contributors: Kondev Jane
Source: check_circle
Brandeis University - ScholarWorks

How to assemble a scale-invariant gradient

eLife
2022-03-21 | Journal article
DOI: 10.7554/eLife.71365
Part of ISSN: 2050-084X
Contributors: Arnab Datta; Sagnik Ghosh; Kondev Jane
Source: check_circle
Brandeis University - ScholarWorks

A Probabilistic Approach to Growth Networks

Operations research
2021-12-22 | Journal article
DOI: 10.1287/opre.2021.2195
Part of ISSN: 0030-364X
Contributors: Jelenković Predrag; Kondev Jané; Mohapatra Lishibanya; Petar Momcilovic
Source: check_circle
Brandeis University - ScholarWorks

Non-genetic variability in microbial populations: survival strategy or nuisance?

Reports on progress in physics
2021-11-10 | Journal article
DOI: 10.1088/1361-6633/ac2c92
Part of ISSN: 0034-4885
Contributors: Ethan Levien; Min Jiseon; Kondev Jane; Amir Ariel
Source: check_circle
Brandeis University - ScholarWorks

Fundamental limits on the rate of bacterial growth and their influence on proteomic composition

Cell systems
2021-09-22 | Journal article
DOI: 10.1016/j.cels.2021.06.002
Part of ISSN: 2405-4712
Contributors: Belliveau Nathan M.; Chure Griffin; Hueschen Christina L.; Garcia Hernan G.; Kondev Jane; Fisher Daniel S.; Theriot Julie A.; Phillips Rob
Source: check_circle
Brandeis University - ScholarWorks

Scaling of subcellular actin structures with cell length through decelerated growth

eLife
2021-06-11 | Journal article
DOI: 10.7554/eLife.68424
Part of ISSN: 2050-084X
Contributors: McInally Shane G; Kondev Jane; Bruce Goode
Source: check_circle
Brandeis University - ScholarWorks

Control of filament length by a depolymerizing gradient

PLoS computational biology
2020-12 | Journal article
DOI: 10.1371/journal.pcbi.1008440
Part of ISSN: 1553-734X
Contributors: Datta Arnab; Harbage David; Kondev Jane
Source: check_circle
Brandeis University - ScholarWorks

Yeast ATM and ATR kinases use different mechanisms to spread histone H2A phosphorylation around a DNA double-strand break

Proceedings of the National Academy of Sciences - PNAS
2020-09-01 | Journal article
DOI: 10.1073/pnas.2002126117
Part of ISSN: 0027-8424
Contributors: Li Kevin; Bronk Gabriel; Kondev Jane; Haber James E
Source: check_circle
Brandeis University - ScholarWorks

The interplay of phenotypic variability and fitness in finite microbial populations

Journal of the Royal Society interface
2020-05 | Journal article
DOI: 10.1098/rsif.2019.0827
Part of ISSN: 1742-5689
Contributors: Levien Ethan; Kondev Jane; Amir Ariel
Source: check_circle
Brandeis University - ScholarWorks

Physical Biology of the Cell

2020-01-29 | Book
ISBN:

9.78082E+12
Contributors: Orme Nigel; Garcia Hernan; Theriot Julie; Phillips Rob; Kondev Jane
Source: check_circle
Brandeis University - ScholarWorks

Physical Biology of the Cell

2020-01-29 | Book
ISBN: 9780815344506
Contributors: Theriot Julie; Phillips Rob; Kondev Jane; Garcia Hernan; Orme Nigel
Source: check_circle
Brandeis University - ScholarWorks

Alternative transcription cycle for bacterial RNA polymerase

Nature Communications
2020-01-23 | Journal article
DOI: 10.1038/s41467-019-14208-9
Part of ISSN: 2041-1723
Contributors: Harden Timothy T; Landick Robert; Hochschild Ann; Kondev Jane; Gelles Jeff; Herlambang Karina S; Chamberlain Mathew; Lalanne Jean-Benoît; Wells Christopher D; Li Gene-Wei
Source: check_circle
Brandeis University - ScholarWorks

Length-dependent disassembly maintains four different flagellar lengths in Giardia

2019-12-19 | Journal article
OTHER-ID:

9924086685701921
Contributors: McInally Shane G; Kondev Jane; Dawson Scott C
Source: check_circle
Brandeis University - ScholarWorks

Synergy between Cyclase-associated protein and Cofilin accelerates actin filament depolymerization by two orders of magnitude

Nature communications
2019-11-22 | Journal article
DOI: 10.1038/s41467-019-13268-1
Part of ISSN: 2041-1723
Contributors: Shekhar Shashank; Kondev Jane; Gelles Jeff; Goode Bruce L
Source: check_circle
Brandeis University - ScholarWorks

Length regulation of multiple flagella that self-assemble from a shared pool of components

eLife
2019-10-09 | Journal article
DOI: 10.7554/eLife.42599
Part of ISSN: 2050-084X
Contributors: Fai Thomas G; Mohapatra Lishibanya; Kar Prathitha; Kondev Jane; Amir Ariel
Source: check_circle
Brandeis University - ScholarWorks

Complex signal processing in synthetic gene circuits using cooperative regulatory assemblies

Science (American Association for the Advancement of Science)
2019-05-10 | Journal article
DOI: 10.1126/science.aau8287
Part of ISSN: 0036-8075
Contributors: Bashor Caleb J; Patel Nikit; Choubey Sandeep; Beyzavi Ali; Kondev Jané; Collins James J; Khalil Ahmad S
Source: check_circle
Brandeis University - ScholarWorks

The Limiting-Pool Mechanism Fails to Control the Size of Multiple Organelles

Cell systems
2017-05-24 | Journal article
DOI: 10.1016/j.cels.2017.04.011
Part of ISSN: 2405-4712
Contributors: Mohapatra Lishibanya; Lagny Thibaut J; Harbage David; Jelenkovic Predrag R; Kondev Jane
Source: check_circle
Brandeis University - ScholarWorks

Cooperators trade off ecological resilience and evolutionary stability in public goods games

Journal of the Royal Society interface
2017-02 | Journal article
DOI: 10.1098/rsif.2016.0967
Part of ISSN: 1742-5689
Contributors: Rauch Joseph; Kondev Jane; Sanchez Alvaro
Source: check_circle
Brandeis University - ScholarWorks

Chromosome-refolding model of mating-type switching in yeast

Proceedings of the National Academy of Sciences - PNAS
2016-11-08 | Journal article
DOI: 10.1073/pnas.1607103113
Part of ISSN: 0027-8424
Contributors: Avşaroğlu Barış; Bronk Gabriel; Li Kevin; Haber James E; Kondev Jane
Source: check_circle
Brandeis University - ScholarWorks

Design Principles of Length Control of Cytoskeletal Structures

Annual review of biophysics
2016-07-05 | Journal article
DOI: 10.1146/annurev-biophys-070915-094206
Part of ISSN: 1936-122X
Contributors: Mohapatra Lishibanya; Goode Bruce L; Jelenkovic Predrag; Phillips Rob; Kondev Jane
Source: check_circle
Brandeis University - ScholarWorks

Bacterial RNA polymerase can retain σ70 throughout transcription

Proceedings of the National Academy of Sciences - PNAS
2016-01-19 | Journal article
DOI: 10.1073/pnas.1513899113
Part of ISSN: 0027-8424
Contributors: Harden Timothy T; Wells Christopher D; Friedman Larry J; Landick Robert; Hochschild Ann; Kondev Jane; Jeff Gelles
Source: check_circle
Brandeis University - ScholarWorks

Deciphering Transcriptional Dynamics In Vivo by Counting Nascent RNA Molecules

2016-01-01 | Dataset
OTHER-ID:

9924085805401921
Contributors: Choubey Sandeep; Kondev Jane; Sanchez Alvaro
Source: check_circle
Brandeis University - ScholarWorks

Effect of Chromosome Tethering on Nuclear Organization in Yeast

2016-01-01 | Dataset
OTHER-ID:

9924086485801921
Contributors: Avşaroğlu Barış; Bronk Gabriel; Gordon-Messer Susannah; Ham Jungoh; A Bressan Debra; James Haber; Kondev Jane
Source: check_circle
Brandeis University - ScholarWorks

Bacterial Transcript Elongation Complexes can Retain Sigma Factor throughout RNA Synthesis

Biophysical journal
2015-01-27 | Journal article
DOI: 10.1016/j.bpj.2014.11.2933
Part of ISSN: 0006-3495
Contributors: Gelles Jeff; Harden Timothy T; Friedman Larry J; Wells Christopher D; Hochschild Ann; Kondev Jane
Source: check_circle
Brandeis University - ScholarWorks

Competitor Effect on Molecular Complex Dissociation in the Absence of Ternary Complex Formation

Biophysical journal
2015-01-27 | Journal article
DOI: 10.1016/j.bpj.2014.11.905
Part of ISSN: 0006-3495
Contributors: Paramanathan Thayaparan; Reeves Daniel; Friedman Larry J; Kondev Jane; Gelles Jeff
Source: check_circle
Brandeis University - ScholarWorks

Effect of chromosome tethering on nuclear organization in yeast

PloS one
2014 | Journal article
DOI: 10.1371/journal.pone.0102474
Part of ISSN: 1932-6203
Contributors: Avşaroğlu Barış; Bronk Gabriel; Gordon-Messer Susannah; Ham Jungoh; Bressan Debra A; Haber James E; Kondev Jane
Source: check_circle
Brandeis University - ScholarWorks

A general mechanism for competitor-induced dissociation of molecular complexes

Nature communications
2014-10-24 | Journal article
DOI: 10.1038/ncomms6207
Part of ISSN: 2041-1723
Contributors: Paramanathan Thayaparan; Reeves Daniel; Friedman Larry J; Kondev Jane; Gelles Jeff
Source: check_circle
Brandeis University - ScholarWorks

Bacterial decision making

Physics today
2014-02 | Journal article
DOI: 10.1063/PT.3.2276
Part of ISSN: 0031-9228
Contributors: Kondev Jané
Source: check_circle
Brandeis University - ScholarWorks

Regulation of Noise in Gene Expression

Annual review of biophysics
2013-05-06 | Journal article
DOI: 10.1146/annurev-biophys-083012-130401
Part of ISSN: 1936-122X
Contributors: Sanchez Alvaro; Choubey Sandeep; Kondev Jane
Source: check_circle
Brandeis University - ScholarWorks

Length Regulation of Actin Filament Arrays

Biophysical journal
2013-01 | Journal article
DOI: 10.1016/j.bpj.2012.11.794
Part of ISSN: 0006-3495
Contributors: Goode Bruce L; Kondev Jane; Mohapatra Lishibanya; Eskin Julian
Source: check_circle
Brandeis University - ScholarWorks

Operator Sequence Alters Gene Expression Independently of Transcription Factor Occupancy in Bacteria

Cell reports (Cambridge)
2012-07-26 | Journal article
DOI: 10.1016/j.celrep.2012.06.004
Part of ISSN: 2211-1247
Contributors: Garcia Hernan G; Sanchez Alvaro; Boedicker James Q; Osborne Melisa; Gelles Jeff; Kondev Jane; Phillips Rob
Source: check_circle
Brandeis University - ScholarWorks

Thermodynamics of Biological Processes

Methods in Enzymology
2011 | Book chapter
DOI: 10.1016/B978-0-12-381268-1.00014-8
Part of ISSN: 0076-6879
Part of ISBN: 9780123860033
Part of ISBN: 0123860032
Contributors: Garcia Hernan G; Kondev Jane; Orme Nigel; Theriot Julie A; Phillips Rob
Source: check_circle
Brandeis University - ScholarWorks

Dynamics of Homology Searching During Gene Conversion in Saccharomyces cerevisiae Revealed by Donor Competition

Genetics (Austin)
2011-12 | Journal article
DOI: 10.1534/genetics.111.132738
Part of ISSN: 0016-6731
Contributors: Haber James E; Coïc Eric; Martin Joshua; Ryu Taehyun; Tay Sue Yen; Kondev Jané
Source: check_circle
Brandeis University - ScholarWorks

Mechanism of transcriptional repression at a bacterial promoter by analysis of single molecules

The EMBO journal
2011-10-05 | Journal article
DOI: 10.1038/emboj.2011.273
Part of ISSN: 0261-4189
Contributors: Kondev Jane; Gelles Jeff; Osborne Melisa L; Friedman Larry J; Sanchez Alvaro
Source: check_circle
Brandeis University - ScholarWorks

Regulation of biochemical reaction rates by flexible tethers

Physical Review. E, Statistical, nonlinear, and soft matter physics
2011-08 | Journal article
DOI: 10.1103/PhysRevE.84.021914
Part of ISSN: 1539-3755
Contributors: Reeves Daniel; Cheveralls Keith; Kondev Jane
Source: check_circle
Brandeis University - ScholarWorks

Transcription by the numbers redux: experiments and calculations that surprise

Trends in cell biology
2010 | Journal article
DOI: 10.1016/j.tcb.2010.07.002
Part of ISSN: 0962-8924
Contributors: Garcia Hernan G; Sanchez Alvaro; Kuhlman Thomas; Kondev Jane; Phillips Rob
Source: check_circle
Brandeis University - ScholarWorks

Strong intranucleoid interactions organize the Escherichia coli chromosome into a nucleoid filament

Proceedings of the National Academy of Sciences - PNAS
2010-03-16 | Journal article
DOI: 10.1073/pnas.0912062107
Part of ISSN: 0027-8424
Contributors: Wiggins Paul A; Cheveralls Keith C; Martin Joshua S; Lintner Robert; Kondev Jané
Source: check_circle
Brandeis University - ScholarWorks

Reduced amino acid alphabets exhibit an improved sensitivity and selectivity in fold assignment

Bioinformatics
2009-06-01 | Journal article
DOI: 10.1093/bioinformatics/btp164
Part of ISSN: 1367-4803
Contributors: Peterson Eric L; Kondev Jané; Theriot Julie A; Phillips Rob
Source: check_circle
Brandeis University - ScholarWorks
Items per page:
Page 1 of 2
How many people are using ORCID?