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Detecting spatially co-expressed gene clusters with functional coherence by graph-regularized convolutional neural network

Bioinformatics
2021-12-02 | Journal article
Contributors: Tianci Song; Kathleen K Markham; Zhuliu Li; Kristen E Muller; Kathleen Greenham; Rui Kuang; Pier Luigi Martelli
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Platform-integrated mRNA isoform quantification

Bioinformatics
2020-04-15 | Journal article
Contributors: Jiao Sun; Jae-Woong Chang; Teng Zhang; Jeongsik Yong; Rui Kuang; Wei Zhang; Jan Gorodkin
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Detecting Population-Differentiation Copy Number Variants in Human Population Tree by Sparse Group Selection

IEEE/ACM Transactions on Computational Biology and Bioinformatics
2019-03-01 | Journal article
Contributors: Huanan Zhang; David Roe; Rui Kuang
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A multitask clustering approach for single-cell RNA-seq analysis in Recessive Dystrophic Epidermolysis Bullosa

PLOS Computational Biology
2018-04-09 | Journal article
Contributors: Huanan Zhang; Aly Khan; Catherine A. A. Lee; Zhuliu Li; John R. Garbe; Cindy R. Eide; Raphael Petegrosso; Rui Kuang; Jakub Tolar
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