Personal information

Parallel computing, Machine learning, Bio-inspired optimization

Activities

Employment (1)

Karlsruhe Institute of Technology: Karlsruhe, DE

2021-10-01 to present | Postdoctoral researcher and consultant in applied AI and high performance computing (Scientific Computing Center)
Employment
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Marie Weiel

Education and qualifications (1)

Karlsruhe Institute of Technology: Karlsruhe, DE

2018-04-01 to 2021-07-09 | Dr. rer. nat. in Computational Biophysics (Steinbuch Centre for Computing)
Education
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Marie Weiel

Works (13)

AB-Training: A Communication-Efficient Approach for Distributed Low-Rank Learning

2024 | Preprint
Contributors: Daniel Coquelin; Katherina Flügel; Marie Weiel; Nicholas Kiefer; Muhammed Öz; Charlotte Debus; Achim Streit; Markus Götz
Source: Self-asserted source
Marie Weiel

Harnessing Orthogonality to Train Low-Rank Neural Networks

2024 | Preprint
Contributors: Daniel Coquelin; Katharina Flügel; Marie Weiel; Nicholas Kiefer; Charlotte Debus; Achim Streit; Markus Götz
Source: Self-asserted source
Marie Weiel

Feed-Forward Optimization With Delayed Feedback for Neural Networks

2023 | Preprint
Contributors: Katharina Flügel; Daniel Coquelin; Marie Weiel; Charlotte Debus; Achim Streit; Markus Götz
Source: Self-asserted source
Marie Weiel

Massively Parallel Genetic Optimization Through Asynchronous Propagation of Populations

2023 | Book chapter
Contributors: Oskar Taubert; Marie Weiel; Daniel Coquelin; Anis Farshian; Charlotte Debus; Alexander Schug; Achim Streit; Markus Götz
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RNA contact prediction by data efficient deep learning

Communications Biology
2023-09-06 | Journal article | Author
Contributors: Oskar Taubert; Fabrice von der Lehr; Alina Bazarova; Christian Faber; Philipp Knechtges; Marie Weiel; Charlotte Debus; Daniel Coquelin; Achim Basermann; Achim Streit et al.
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Repository KITopen (Karlsruhe Institute of Technology)

Massively Parallel Genetic Optimization Through Asynchronous Propagation of Populations

2023-01-20 | Preprint | Author
Contributors: Oskar Taubert; Marie Weiel; Daniel Coquelin; Anis Farshian; Charlotte Debus; Alexander Schug; Achim Streit; Markus Götz
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Repository KITopen (Karlsruhe Institute of Technology)

RNA Contact Prediction by Data Efficient Deep Learning

2023-01-11 | Preprint
Contributors: Oskar Taubert; Fabrice von der Lehr; Alina Bazarova; Christian Faber; Marie Weiel; Philipp Knechtges; Charlotte Debus; Daniel Coquelin; Achim Basermann; Achim Streit et al.
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Dynamic particle swarm optimization of biomolecular simulation parameters with flexible objective functions

Nature Machine Intelligence
2021-07-22 | Journal article
Contributors: Marie Weiel; Markus Götz; André Klein; Daniel Coquelin; Ralf Floca; Alexander Schug
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The Trimeric Major Capsid Protein of Mavirus is stabilized by its Interlocked N-termini Enabling Core Flexibility for Capsid Assembly

Journal of Molecular Biology
2021-04 | Journal article
Part of ISSN: 0022-2836
Contributors: Alexander Christiansen; Marie Weiel; Andreas Winkler; Alexander Schug; Jochen Reinstein
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Marie Weiel
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Including residual contact information into replica-exchange MD simulations significantly enriches native-like conformations

PLOS ONE
2020-11-16 | Journal article
Part of ISSN: 1932-6203
Contributors: Arthur Voronin; Marie Weiel; Alexander Schug
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Marie Weiel
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FRET Dyes Significantly Affect SAXS Intensities of Proteins

Israel Journal of Chemistry
2020-07 | Journal article
Part of ISSN: 0021-2148
Part of ISSN: 1869-5868
Contributors: Ines Reinartz; Marie Weiel; Alexander Schug
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Marie Weiel
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Rapid interpretation of small-angle X-ray scattering data

PLOS Computational Biology
2019-03-22 | Journal article
Part of ISSN: 1553-7358
Contributors: Marie Weiel; Ines Reinartz; Alexander Schug
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Marie Weiel
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Integration of SAXS data into biomolecular simulations

2018 | Other | Author
Contributors: Marie Weiel; Ines Reinartz; Alexander Schug
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Repository KITopen (Karlsruhe Institute of Technology)