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Scopus Author ID: 7403081233

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Brandeis University: Waltham, MA, US

Gyula and Katica Tauber Professor of Life Science
Employment
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Brandeis University - ScholarWorks

Brandeis University: Waltham, MA, US

1994-09 to present | Professor (Biology)
Employment
Source: Self-asserted source
Sacha Nelson

Education and qualifications (1)

Brown University: Providence, RI, US

1977-09 to 1983-05 | Sc.B. (Neuroscience)
Education
Source: Self-asserted source
Sacha Nelson

Works (50 of 188)

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Page 1 of 4

Multiplexed CRISPRi Reveals a Transcriptional Switch Between KLF Activators and Repressors in the Maturing Neocortex

2025-02-08 | Preprint
DOI: 10.1101/2025.02.07.636951
Contributors: Ryan W Kirk; Liwei Sun; Ruixuan Xiao; Erin A Clark; Sacha Nelson
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Crossref

Progressive Circuit Hyperexcitability in Mouse Neocortical Slice Cultures with Increasing Duration of Activity Silencing

eneuro
2024-05 | Journal article
DOI: 10.1523/ENEURO.0362-23.2024
Contributors: Derek L. Wise; Samuel B. Greene; Yasmin Escobedo-Lozoya; Stephen D. Van Hooser; Sacha B. Nelson
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Crossref
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Prolonged activity-deprivation causes pre- and postsynaptic compensatory plasticity at neocortical excitatory synapses

eNeuro
2024-05-22 | Journal article | Author
DOI: 10.1523/ENEURO.0366-23.2024
Contributors: Valakh Vera; Gao Emma Y; Bhonsle Aishwarya; Lei Qian L; Cheng Xinyu; Greene Samuel B; Stephen Van Hooser; Sacha Nelson; Wise Derek L; Escobedo-Lozoya Yasmin
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Brandeis University - ScholarWorks
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Progressive circuit hyperexcitability in mouse neocortical slice cultures with increasing duration of activity silencing

2023-07-09 | Preprint
DOI: 10.1101/2023.07.07.548151
Contributors: Derek L. Wise; Samuel B. Greene; Yasmin Escobedo-Lozoya; Stephen D. Van Hooser; Sacha B. Nelson
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A transcriptional constraint mechanism limits the homeostatic response to activity deprivation in mammalian neocortex

eLife
2023-02-07 | Journal article
PMID: 36749029
Contributors: Nelson Sacha B; Kirk Ryan; O'Toole Sean M; Valakh Vera; Wise Derek; Zhu Xiaoyue Aelita; Sha Mingqi; Fok Jaidyn; Van Hooser Stephen D; Schectman Robin et al.
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Brandeis University - ScholarWorks

A transcriptional constraint mechanism limits the homeostatic response to activity deprivation in mammalian neocortex

bioRxiv
2021-10-21 | Preprint
DOI: 10.1101/2021.10.20.465163
Contributors: Cepeda Isabel; Kirk Ryan; O'toole Sean M; Nelson Sacha B; Valakh Vera; Zhu Xiaoyue Aelita; Wise Derek L; Van Hooser Stephen; Schectman Robin
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Brandeis University - ScholarWorks

A transcriptional constraint mechanism limits the homeostatic response to activity deprivation in mammalian neocortex

2021-10-21 | Journal article
DOI: 10.7554/elife.74899
Contributors: Schectman Robin; Cepeda Isabel; Kirk Ryan; O’Toole Sean; Nelson Sacha B.; Valakh Vera; Wise Derek; Zhu Xiaoyue Aelita; Sha Mingqi; Fok Jaidyn et al.
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Brandeis University - ScholarWorks

Loss of Stk11 in basolateral amygdalar projection neurons impairs taste aversion learning by altering the temporal pattern of taste response plasticity in gustatory cortex

2021-05-31 | Other
DOI: 10.1101/2021.05.31.446460
Contributors: Roshan D. Nanu; Thomas J. Murdy; David Levitan; Seneca Scott; Sacha B. Nelson; Donald B. Katz
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Crossref

Cortical RORβ is required for layer 4 transcriptional identity and barrel integrity

eLife
2020-08-27 | Journal article
DOI: 10.7554/ELIFE.52370
Part of ISSN: 2050-084X
Contributors: Clark Erin A; Rutlin Michael; Capano Lucia; Aviles Samuel; Saadon Jordan R; Lauer Timothy; Taneja Praveen; Zhang Qiyu; Bullis James B; Myers Emma et al.
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Brandeis University - ScholarWorks

Deletion of Stk11 and Fos in mouse BLA projection neurons alters intrinsic excitability and impairs formation of long-term aversive memory

eLife
2020-08-11 | Journal article
DOI: 10.7554/eLife.61036
Part of ISSN: 2050-084X
Contributors: Levitan David; Shima Yasuyuki; Liu Chenghao; Yang Tracy; Lin Jian-You; Wachutka Joseph; Ali Marandi Ghoddousi Ramin; Veiga Beltrame Eduardo da; Richter Troy A; Katz Donald B et al.
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Brandeis University - ScholarWorks

Relation between activity-induced intracellular sodium transients and ATP dynamics in mouse hippocampal neurons

The Journal of physiology
2019-12 | Journal article
DOI: 10.1113/JP278658
Part of ISSN: 0022-3751
Contributors: Hirrlinger Johannes; Rose Christine R; Gerkau Niklas J; Lerchundi Rodrigo; Nelson Joel S E; Lantermann Marina; Meyer Jan
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Brandeis University - ScholarWorks

ATAC-seq on Sorted Adult Mouse Neurons

Bio-protocol
2019-10-05 | Journal article
DOI: 10.21769/BioProtoc.3382
Part of ISSN: 2331-8325
Contributors: Clark Erin A; Shima Yasuyuki; Nelson Sacha
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Brandeis University - ScholarWorks

Publisher Correction: A repeated molecular architecture across thalamic pathways

Nature neuroscience
2019-10-01 | Journal article
DOI: 10.1038/s41593-019-0521-1
Part of ISSN: 1097-6256
Contributors: Phillips James W; Schulmann Anton; Hara Erina; Winnubst Johan; Liu Chenghao; Valakh Vera; Mensh Brett; Wang Lihua; Shields Brenda C; Korff Wyatt et al.
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Brandeis University - ScholarWorks

Single and population coding of taste in the gustatory cortex of awake mice

Journal of neurophysiology
2019-09-23 | Journal article
DOI: 10.1152/jn.00357.2019
Part of ISSN: 0022-3077
Contributors: Levitan David; Lin Jian-You; Wachutka Joseph; Mukherjee Narendra; Nelson Sacha B; Katz Donald B
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Brandeis University - ScholarWorks

A repeated molecular architecture across thalamic pathways

Nature neuroscience
2019-09-16 | Journal article
DOI: 10.1038/s41593-019-0483-3
Part of ISSN: 1097-6256
Contributors: Mensh Brett; Dudman Joshua T; Nelson Sacha B; Hantman Adam W; Wang Lihua; Liu Chenghao; Valakh Vera; Phillips James W; Chandrashekar Jayaram; Lemire Andrew L et al.
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Brandeis University - ScholarWorks

Editorial overview: Neuronal Identity

Current opinion in neurobiology
2019-06 | Journal article
DOI: 10.1016/j.conb.2019.05.004
Part of ISSN: 0959-4388
Contributors: Nelson Sacha; Hobert Oliver
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Brandeis University - ScholarWorks

Mapping the transcriptional diversity of genetically and anatomically defined cell populations in the mouse brain

eLife
2019-04-12 | Journal article
DOI: 10.7554/eLife.38619
Part of ISSN: 2050-084X
Contributors: Sugino Ken; Clark Erin; Schulmann Anton; Shima Yasuyuki; Wang Lihua; Hunt David L; Hooks Bryan M; Tränkner Dimitri; Picard Serge; Lemire Andrew L et al.
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Brandeis University - ScholarWorks

The role of the gustatory cortex in incidental experience-evoked enhancement of later taste learning

Learning & memory (Cold Spring Harbor, N.Y.)
2018-11-01 | Journal article
DOI: 10.1101/lm.048181.118
Part of ISSN: 1072-0502
Contributors: Katz Donald B; Levitan David; Flores Veronica L; Parmet Tamar; Mukherjee Narendra; Nelson Sacha
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Brandeis University - ScholarWorks

Dicer maintains the identity and function of proprioceptive sensory neurons

Journal of neurophysiology
2017-03-01 | Journal article
DOI: 10.1152/jn.00763.2016
Part of ISSN: 0022-3077
Contributors: Ferrer Monica M; Mekonnen Jennifer; Zhang Haihan; Shima Yasuyuki; Ladle David R; Nelson Sacha B; O'Toole Sean M
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Brandeis University - ScholarWorks

Mapping in-vivo optic nerve head strains caused by intraocular and intracranial pressures

Proceedings of SPIE, the international society for optical engineering
2017-02-21 | Journal article
DOI: 10.1117/12.2257360
Part of ISSN: 0277-786X
Part of ISBN: 9781510605756
Part of ISBN: 1510605754
Contributors: Grimm J; Wang B; Smith M A; Gogola A; Nelson S; Tyler-Kabara E; Schuman J; Wollstein G; Sigal I A; Tran H
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Brandeis University - ScholarWorks

Prenatal thalamic waves regulate cortical area size prior to sensory processing

Nature communications
2017-02-03 | Journal article
DOI: 10.1038/ncomms14172
Part of ISSN: 2041-1723
Contributors: Valdeolmillos Miguel; Nelson Sacha; Moreno-Juan Verónica; López-Bendito Guillermina; Ducret Sebastien; Andrés Belen; Rodríguez-Malmierca Luis; Susín Rafael; Schaad Olivier; Mezzera Cecilia et al.
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Brandeis University - ScholarWorks

Optogenetic Mapping of Intracortical Circuits Originating from Semilunar Cells in the Piriform Cortex

Cerebral cortex (New York, N.Y. 1991)
2017-01 | Journal article
DOI: 10.1093/cercor/bhv258
Part of ISSN: 1047-3211
Contributors: Choy Julian M.C; Suzuki Norimitsu; Shima Yasuyuki; Budisantoso Timotheus; Nelson Sacha B; Bekkers John M
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Brandeis University - ScholarWorks

The Cellular and Synaptic Architecture of the Mechanosensory Dorsal Horn

Cell (Cambridge)
2016-12-29 | Journal article
DOI: 10.1016/j.cell.2016.12.010
Part of ISSN: 0092-8674
Contributors: Abraira Victoria E; Kuehn Emily D; Chirila Anda M; Springel Mark W; Toliver Alexis A; Bai Ling; Zimmerman Amanda L; Orefice Lauren L; Boyle Kieran A; Song Bryan J et al.
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Brandeis University - ScholarWorks

Striosome–dendron bouquets highlight a unique striatonigral circuit targeting dopamine-containing neurons

Proceedings of the National Academy of Sciences - PNAS
2016-10-04 | Journal article
DOI: 10.1073/pnas.1613337113
Part of ISSN: 0027-8424
Contributors: Crittenden Jill R; Tillberg Paul W; Riad Michael H; Shima Yasuyuki; Gerfen Charles R; Curry Jeffrey; Housman David E; Nelson Sacha B; Boyden Edward S; Graybiel Ann M
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Brandeis University - ScholarWorks

Upregulation of μ3A Drives Homeostatic Plasticity by Rerouting AMPAR into the Recycling Endosomal Pathway

Cell reports (Cambridge)
2016-09-06 | Journal article
DOI: 10.1016/j.celrep.2016.08.009
Part of ISSN: 2211-1247
Contributors: Steinmetz Celine C; Tatavarty Vedakumar; Sugino Ken; Shima Yasuyuki; Lambo Mary; Joseph Anne; Lin Heather; Rutlin Michael; Hempel Chris M; Okaty Benjamin W et al.
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Brandeis University - ScholarWorks

A Mammalian enhancer trap resource for discovering and manipulating neuronal cell types

eLife
2016-03-21 | Journal article
DOI: 10.7554/eLife.13503
Contributors: Yasuyuki Shima; Ken Sugino; Chris Martin Hempel; Masami Shima; Praveen Taneja; James B Bullis; Sonam Mehta; Carlos Lois; Sacha B Nelson
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Crossref
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A Quantitative Comparison of Cell-Type-Specific Microarray Gene Expression Profiling Methods in the Mouse Brain

2016-01-01 | Dataset
OTHER-ID:

9924086330201921
Contributors: W Okaty Benjamin; Sugino Ken; Nelson Sacha
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Brandeis University - ScholarWorks

A Neural Model of Auditory Space Compatible with Human Perception under Simulated Echoic Conditions

PloS one
2015 | Journal article
DOI: 10.1371/journal.pone.0137900
Part of ISSN: 1932-6203
Contributors: Nelson Brian S; Donovan Jeff M; Takahashi Terry T
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Brandeis University - ScholarWorks

RNASeqMetaDB: a database and web server for navigating metadata of publicly available mouse RNA-Seq datasets

Bioinformatics (Oxford, England)
2015-12-15 | Journal article
DOI: 10.1093/bioinformatics/btv503
Part of ISSN: 1367-4803
Contributors: Guo Zhengyu; Tzvetkova Boriana; Bassik Jennifer M; Bodziak Tara; Wojnar Brianna M; Qiao Wei; Obaida Md A; Nelson Sacha B; Hu Bo Hua; Yu Peng
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Brandeis University - ScholarWorks

Synapse and genome

Science signaling
2015-09-29 | Journal article
DOI: 10.1126/scisignal.aad2441
Part of ISSN: 1945-0877
Contributors: Nelson Sacha B; Clark Erin A
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Brandeis University - ScholarWorks

Excitatory/Inhibitory Balance and Circuit Homeostasis in Autism Spectrum Disorders

Neuron (Cambridge, Mass.)
2015-08-19 | Journal article
DOI: 10.1016/j.neuron.2015.07.033
Part of ISSN: 0896-6273
Contributors: Nelson Sacha B; Valakh Vera
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Brandeis University - ScholarWorks

Cell-type--based model explaining coexpression patterns of genes in the brain

Proceedings of the National Academy of Sciences
2014 | Journal article
Source: Self-asserted source
Sacha Nelson

Cell-Type-Specific Repression by Methyl-CpG-Binding Protein 2 Is Biased toward Long Genes

The Journal of Neuroscience
2014 | Journal article
Source: Self-asserted source
Sacha Nelson

Cell-type-specific repression by methyl-CpG-binding protein 2 is biased toward long genes

The Journal of neuroscience
2014-09-17 | Journal article
DOI: 10.1523/JNEUROSCI.2674-14.2014
Part of ISSN: 0270-6474
Contributors: Sugino Ken; Hempel Chris M; Okaty Benjamin W; Arnson Hannah A; Kato Saori; Dani Vardhan S; Nelson Sacha B
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Brandeis University - ScholarWorks

A cell-type based model explaining co-expression patterns of genes in the brain

2014-04-08 | Journal article
OTHER-ID:

9923973875401921
Contributors: Grange Pascal; Bohland Jason; Bokil Hemant; Nelson Sacha; Okaty Benjamin; Sugino Ken; Ng Lydia; Hawrylycz Michael; Mitra Partha P
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Brandeis University - ScholarWorks

Cell-type-based model explaining coexpression patterns of genes in the brain

Proceedings of the National Academy of Sciences - PNAS
2014-04-08 | Journal article
DOI: 10.1073/pnas.1312098111
Part of ISSN: 0027-8424
Contributors: Grange Pascal; Bohland Jason W; Okaty Benjamin W; Sugino Ken; Bokil Hemant; Nelson Sacha B; Ng Lydia; Hawrylycz Michael; Mitra Partha P
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Brandeis University - ScholarWorks

Cell-type-specific transcriptomes and the Allen Atlas (II): discussion of the linear model of brain-wide densities of cell types

2014-02-12 | Preprint | Author
DOI: 10.48550/arXiv.1402.2820
Contributors: Grange Pascal; Bohland Jason W; Okaty Benjamin; Sugino Ken; Bokil Hemant; Sacha Nelson; Ng Lydia; Hawrylycz Michael; Mitra Partha P
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Brandeis University - ScholarWorks

Convergence of pontine and proprioceptive streams onto multimodal cerebellar granule cells

eLife
2013 | Journal article
DOI:

10.7554/eLife.00400
Contributors: Bai, S.; Guo, C.; Hantman, A.W.; Huang, C.-C.; Mensh, B.D.; Nelson, S.B.; Shima, Y.; Sugino, K.
Source: Self-asserted source
Sacha Nelson via Scopus - Elsevier
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New insights into the classification and nomenclature of cortical GABAergic interneurons

Nature Reviews Neuroscience
2013 | Journal article
DOI:

10.1038/nrn3444
Contributors: Anderson, S.; Ascoli, G.A.; Benavides-Piccione, R.; Bielza, C.; Burkhalter, A.; Cauli, B.; Defelipe, J.; Fairén, A.; Feldmeyer, D.; Fishell, G. et al.
Source: Self-asserted source
Sacha Nelson via Scopus - Elsevier
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The Maturation of Firing Properties of Forebrain GABAergic Interneurons

Comprehensive Developmental Neuroscience: Cellular Migration and Formation of Neuronal Connections
2013 | Book chapter
DOI: 10.1016/B978-0-12-397266-8.00154-X
Part of ISBN: 9780123973474
Part of ISBN: 9780123972668
Part of ISBN: 0123973473
Part of ISBN: 0123972663
Contributors: Okaty B.W; Nelson S.B
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Brandeis University - ScholarWorks

The role of envelope shape in the localization of multiple sound sources and echoes in the barn owl

Journal of neurophysiology
2013-02-15 | Journal article
DOI: 10.1152/jn.00755.2012
Part of ISSN: 0022-3077
Contributors: Baxter Caitlin S; Nelson Brian S; Takahashi Terry T
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Brandeis University - ScholarWorks

A critical and cell-autonomous role for MeCP2 in synaptic scaling up

Journal of Neuroscience
2012 | Journal article
DOI:

10.1523/JNEUROSCI.3077-12.2012
Contributors: Blackman, M.P.; Djukic, B.; Nelson, S.B.; Turrigiano, G.G.
Source: Self-asserted source
Sacha Nelson via Scopus - Elsevier
grade
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Preclinical research in Rett syndrome: Setting the foundation for translational success

DMM Disease Models and Mechanisms
2012 | Journal article
DOI:

10.1242/dmm.011007
Contributors: Berger-Sweeney, J.E.; Blue, M.E.; Christian, D.; Crawley, J.N.; Eubanks, J.H.; Giustetto, M.; Guy, J.; Hillaire-Clarke, C.St.; Howell, C.J.; Justice, M.J. et al.
Source: Self-asserted source
Sacha Nelson via Scopus - Elsevier
grade
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The contributions of onset and offset echo delays to auditory spatial perception in human listeners

The Journal of the Acoustical Society of America
2012-12-06 | Journal article
DOI: 10.1121/1.4764877
Part of ISSN: 0001-4966
Contributors: DONOVAN Jeff M; NELSON Brian S; TAKAHASHI Terry T
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Brandeis University - ScholarWorks

A quantitative comparison of cell-type-specific microarray gene expression profiling methods in the mouse brain

PLoS ONE
2011 | Journal article
DOI:

10.1371/journal.pone.0016493
Contributors: Nelson, S.B.; Okaty, B.W.; Sugino, K.
Source: Self-asserted source
Sacha Nelson via Scopus - Elsevier
grade
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A resource of cre driver lines for genetic targeting of GABAergic neurons in cerebral cortex

Neuron
2011 | Journal article
DOI:

10.1016/j.neuron.2011.12.010
Contributors: Fishell, G.; Fu, Y.; He, M.; Huang, Z.J.; Kim, S.; Kvitsiani, D.; Lin, Y.; Lu, J.; Miyoshi, G.; Nelson, S.B. et al.
Source: Self-asserted source
Sacha Nelson via Scopus - Elsevier
grade
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A Resource of Cre Driver Lines for Genetic Targeting of GABAergic Neurons in Cerebral Cortex

Neuron
2011 | Journal article
DOI:

10.1016/j.neuron.2011.07.026
Contributors: Fishell, G.; Fu, Y.; He, M.; Huang, Z.J.; Kim, S.; Kvitsani, D.; Lin, Y.; Lu, J.; Miyoshi, G.; Nelson, S. et al.
Source: Self-asserted source
Sacha Nelson via Scopus - Elsevier
grade
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Activity-dependent changes in the firing properties of neocortical fast-spiking interneurons in the absence of large changes in gene expression

Developmental Neurobiology
2011 | Journal article
DOI:

10.1002/dneu.20811
Contributors: Kato, S.; Miller, M.N.; Nelson, S.B.; Okaty, B.W.
Source: Self-asserted source
Sacha Nelson via Scopus - Elsevier
grade
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Cell type-specific transcriptomics in the brain

Journal of Neuroscience
2011 | Journal article
DOI:

10.1523/JNEUROSCI.0626-11.2011
Contributors: Nelson, S.B.; Okaty, B.W.; Sugino, K.
Source: Self-asserted source
Sacha Nelson via Scopus - Elsevier
grade
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MeCP2: Phosphorylated Locally, Acting Globally

Neuron
2011 | Journal article
DOI:

10.1016/j.neuron.2011.09.017
Contributors: Nelson, S.; Rutlin, M.
Source: Self-asserted source
Sacha Nelson via Scopus - Elsevier
grade
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Page 1 of 4

Peer review (1 review for 1 publication/grant)

Review activity for Communications biology. (1)
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