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Employment (2)

European Bioinformatics Institute: Cambridge, Cambridgeshire, GB

Data mining expert (UniProt)
Employment
Source: Self-asserted source
Rabie Saidi

European Bioinformatics Institute: Cambridge, Cambridgeshire, GB

2017-11-01 to present | Lead Data Scientist (UniProt)
Employment
Source: Self-asserted source
Rabie Saidi

Works (21)

Hands-on on Protein Function Prediction with Machine Learning and Interactive Analytics

2019-01 | Other
DOI: 10.6019/tol.unip_machine-w.2018.00001.1
OTHER-ID:

C7989
Contributors: Saidi R
Source: Self-asserted source
Rabie Saidi via Europe PubMed Central

Efficiently Mining Recurrent Substructures from Protein Three-Dimensional Structure Graphs.

Journal of computational biology : a journal of computational molecular cell biology
2018-12 | Journal article
DOI: 10.1089/cmb.2018.0171
PMID: 30517022
Contributors: Saidi R; Dhifli W; Maddouri M; Mephu Nguifo E
Source: Self-asserted source
Rabie Saidi via Europe PubMed Central

Rule Mining Techniques to Predict Prokaryotic Metabolic Pathways

Biological Networks and Pathway Analysis
2017 | Book chapter
DOI: 10.1007/978-1-4939-7027-8_12
Part of ISBN: 978-1-4939-7027-8
Source: Self-asserted source
Rabie Saidi

Large-scale Automated Function Prediction of Protein Sequences and an Experimental Case Study Validation on PTEN Transcript Variants

Proteins: Structure, Function, and Bioinformatics
2017-11 | Journal article
DOI: 10.1002/prot.25416
Source: Self-asserted source
Rabie Saidi

UniProt-DAAC: domain architecture alignment and classification, a new method for automatic functional annotation in UniProtKB

Bioinformatics
2016 | Journal article
DOI: 10.1093/bioinformatics/btw114
ARXIV:

/oup/backfile/content_public/journal/bioinformatics/32/15/10.1093_bioinformatics_btw114/3/btw114.pdf
Source: Self-asserted source
Rabie Saidi

Prediction of Metabolic Pathway Involvement in Prokaryotic UniProtKB Data by Association Rule Mining

PLOS ONE
2016-07 | Journal article
DOI: 10.1371/journal.pone.0158896
Source: Self-asserted source
Rabie Saidi

Tools and data services registry: a community effort to document bioinformatics resources

Nucleic Acids Research
2015 | Journal article
DOI: 10.1093/nar/gkv1116
ARXIV:

http://nar.oxfordjournals.org/content/early/2015/11/24/nar.gkv1116.full.pdf+html
Source: Self-asserted source
Rabie Saidi

UniProt: a hub for protein information

Nucleic Acids Research
2015 | Journal article
DOI: 10.1093/nar/gku989
ARXIV:

http://nar.oxfordjournals.org/content/43/D1/D204.full.pdf+html
Source: Self-asserted source
Rabie Saidi

Activities at the Universal Protein Resource (UniProt)

Nucleic Acids Research
2014 | Journal article
DOI: 10.1093/nar/gku469
ARXIV:

http://nar.oxfordjournals.org/content/42/11/7486.full.pdf+html
Source: Self-asserted source
Rabie Saidi

Activities at the Universal Protein Resource (UniProt)

Nucleic Acids Research
2014 | Journal article
DOI: 10.1093/nar/gkt1140
ARXIV:

http://nar.oxfordjournals.org/content/42/D1/D191.full.pdf+html
Source: Self-asserted source
Rabie Saidi

Mining Undominated Association Rules Through Interestingness Measures

International Journal on Artificial Intelligence Tools
2014 | Journal article
DOI: 10.1142/S0218213014600112
Source: Self-asserted source
Rabie Saidi

Smoothing 3D Protein Structure Motifs Through Graph Mining and Amino Acid Similarities

Journal of Computational Biology
2014 | Journal article
DOI: 10.1089/cmb.2013.0092
Source: Self-asserted source
Rabie Saidi

Mining Representative Unsubstituted Graph Patterns Using Prior Similarity Matrix

CoRR
2013 | Journal article
Source: Self-asserted source
Rabie Saidi

A novel approach for mining representative spatial motifs of proteins

ACM International Conference on Bioinformatics, Computational Biology and Biomedicine, BCB' 12, Orlando, FL, USA - October 08 - 10, 2012
2012 | Conference paper
DOI: 10.1145/2382936.2383001
Source: Self-asserted source
Rabie Saidi

Feature extraction in protein sequences classification: a new stability measure

ACM International Conference on Bioinformatics, Computational Biology and Biomedicine, BCB' 12, Orlando, FL, USA - October 08 - 10, 2012
2012 | Conference paper
DOI: 10.1145/2382936.2383060
Source: Self-asserted source
Rabie Saidi

Ranking and Selecting Association Rules Based on Dominance Relationship

IEEE 24th International Conference on Tools with Artificial Intelligence, ICTAI 2012, Athens, Greece, November 7-9, 2012
2012 | Conference paper
DOI: 10.1109/ICTAI.2012.94
Source: Self-asserted source
Rabie Saidi

Etude de stabilité de méthodes d'extraction de motifs à partir des séquences protéiques

Extraction et gestion des connaissances (EGC'2010), Actes, 26 au 29 janvier 2010, Hammamet, Tunisie
2010 | Conference paper
Source: Self-asserted source
Rabie Saidi

Protein graph repository

Extraction et gestion des connaissances (EGC'2010), Actes, 26 au 29 janvier 2010, Hammamet, Tunisie
2010 | Conference paper
Source: Self-asserted source
Rabie Saidi

Protein sequences classification by means of feature extraction with substitution matrices

BMC Bioinformatics
2010 | Journal article
DOI: 10.1186/1471-2105-11-175
Source: Self-asserted source
Rabie Saidi

Comparing graph-based representations of protein for mining purposes

Proceedings of the ACM SIGKDD Workshop on Statistical and Relational Learning in Bioinformatics, Paris, France, June 28, 2009
2009 | Conference paper
DOI: 10.1145/1562090.1562098
Source: Self-asserted source
Rabie Saidi

Prediction of Metabolic Pathways Involvement in Prokaryotic UniProtKB Data by Association Rule Mining

Journal article
OTHER-ID:

C7533
Source: Self-asserted source
Rabie Saidi via Europe PubMed Central
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