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Employment (1)

Karlsruhe Institute of Technology: Karlsruhe, DE

2021-04-01 to present | Group Leader (Institute for Biological Interfaces (IBG 5))
Employment
Source: Self-asserted source
Jochen A. Müller

Education and qualifications (1)

Universität Konstanz: Konstanz, Baden-Württemberg, DE

2000-05-12 | Dr. rer. nat (Microbial Ecology and Physiology)
Education
Source: Self-asserted source
Jochen A. Müller

Works (50 of 54)

Items per page:
Page 1 of 2

scMAR-Seq: a novel workflow for targeted single-cell genomics of microorganisms using radioactive labeling

mSystems
2023-12-21 | Journal article
Contributors: Hao-Yu Lo; Konstantin Wink; Henrike Nitz; Matthias Kästner; Detlev Belder; Jochen A. Müller; Anne-Kristin Kaster; Matthias Hess
Source: check_circle
Crossref

Taxonomic Re-Classification and Expansion of the Phylum Chloroflexota Based on over 5000 Genomes and Metagenome-Assembled Genomes

Microorganisms
2023-10-23 | Journal article
Contributors: Sandra Wiegand; Morgan Sobol; Luca Kristina Schnepp-Pesch; Geng Yan; Sajid Iqbal; John Vollmers; Jochen A. Müller; Anne-Kristin Kaster
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Crossref
grade
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Identification of Antibiotic Resistance Gene Hosts in Treatment Wetlands Using a Single-Cell Based High-Throughput Approach

Water
2023-06-30 | Journal article
Contributors: Camila A. Knecht; Maja Hinkel; Ines Mäusezahl; Anne-Kristin Kaster; Jaime Nivala; Jochen A. Müller
Source: check_circle
Crossref
grade
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Operational parameters optimization for remediation of crude oil-polluted water in floating treatment wetlands using response surface methodology

Scientific Reports
2022-12 | Journal article
Part of ISSN: 2045-2322
Source: Self-asserted source
Jochen A. Müller

Spatial characterization of microbial sulfur cycling in horizontal-flow constructed wetland models

Chemosphere
2022-12 | Journal article
Part of ISSN: 0045-6535
Contributors: Phuong Minh Nguyen; Muhammad Arslan; Uwe Kappelmeyer; Ines Mäusezahl; Arndt Wiessner; Jochen A. Müller
Source: Self-asserted source
Jochen A. Müller

Cellular stress affects the fate of microbial resistance to folate inhibitors in treatment wetlands

Science of The Total Environment
2022-11 | Journal article
Part of ISSN: 0048-9697
Source: Self-asserted source
Jochen A. Müller

IncP‐type plasmids carrying genes for antibiotic resistance or for aromatic compound degradation are prevalent in sequenced Aromatoleum and Thauera strains

Environmental Microbiology
2022-10-28 | Journal article
Part of ISSN: 1462-2912
Part of ISSN: 1462-2920
Contributors: Hao‐Yu Lo; Paula Martínez‐Lavanchy; Tobias Goris; Johann Heider; Matthias Boll; Anne‐Kristin Kaster; Jochen A. Müller
Source: Self-asserted source
Jochen A. Müller

Aerobic naphthenic acid-degrading bacteria in petroleum-coke improve oil sands process water remediation in biofilters: DNA-stable isotope probing reveals methylotrophy in Schmutzdecke

Science of The Total Environment
2022-04 | Journal article
Part of ISSN: 0048-9697
Source: Self-asserted source
Jochen A. Müller

Bioaugmentation-Enhanced Remediation of Crude Oil Polluted Water in Pilot-Scale Floating Treatment Wetlands

Water
2021-10-14 | Journal article
Contributors: Khadeeja Rehman; Muhammad Arslan; Jochen A. Müller; Muhammad Saeed; Asma Imran; Imran Amin; Tanveer Mustafa; Samina Iqbal; Muhammad Afzal
Source: check_circle
Crossref
grade
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Immobilization of metribuzin degrading bacterial consortium MB3R on biochar enhances bioremediation of potato vegetated soil and restores bacterial community structure

Journal of Hazardous Materials
2020-05 | Journal article
Contributors: Abdul Qadeer Wahla; Samina Anwar; Jochen A. Mueller; Muhammad Arslan; Samina Iqbal
Source: check_circle
Crossref

Benzylsuccinate Synthase is Post-Transcriptionally Regulated in the Toluene-Degrading Denitrifier Magnetospirillum sp. Strain 15-1

Microorganisms
2020-05-07 | Journal article
Contributors: Ingrid Meyer-Cifuentes; Sylvie Gruhl; Sven-Bastiaan Haange; Vanessa Lünsmann; Nico Jehmlich; Martin von Bergen; Hermann J. Heipieper; Jochen A. Müller
Source: check_circle
Crossref
grade
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A survey of extended-spectrum beta-lactamase-producing Enterobacteriaceae in urban wetlands in southwestern Nigeria as a step towards generating prevalence maps of antimicrobial resistance

PLOS ONE
2020-03-04 | Journal article
Contributors: Olawale Olufemi Adelowo; Grzegorz Woźniakowski; Odion Osebhahiemen Ikhimiukor; Camila Knecht; John Vollmers; Mudit Bhatia; Anne-Kirstin Kaster; Jochen A. Müller
Source: check_circle
Crossref

Identification of benzene-degrading Proteobacteria in a constructed wetland by employing in situ microcosms and RNA-stable isotope probing

Applied Microbiology and Biotechnology
2020-02-23 | Journal article
Contributors: Henrike Nitz; Márcia Duarte; Ruy Jauregui; Dietmar H. Pieper; Jochen A. Müller; Matthias Kästner
Source: check_circle
Crossref

RNA-Seq analysis of soft rush (Juncus effusus): transcriptome sequencing, de novo assembly, annotation, and polymorphism identification

BMC Genomics
2019-12 | Journal article
Contributors: Muhammad Arslan; Upendra Kumar Devisetty; Martin Porsch; Ivo Große; Jochen A. Müller; Stefan G. Michalski
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Floating treatment wetlands as a suitable option for large-scale wastewater treatment

Nature Sustainability
2019-08-12 | Journal article
Contributors: Muhammad Afzal; Muhammad Arslan; Jochen A. Müller; Ghulam Shabir; Ejazul Islam; Razia Tahseen; Muhammad Anwar-ul-Haq; Amer J. Hashmat; Samina Iqbal; Qaiser M. Khan
Source: check_circle
Crossref

Optimizing the metribuzin degrading potential of a novel bacterial consortium based on Taguchi design of experiment

Journal of Hazardous Materials
2019-03 | Journal article
Contributors: Abdul Qadeer Wahla; Samina Iqbal; Samina Anwar; Sadiqa Firdous; Jochen A. Mueller
Source: check_circle
Crossref

High abundances of class 1 integrase and sulfonamide resistance genes, and characterisation of class 1 integron gene cassettes in four urban wetlands in Nigeria

PLOS ONE
2018-11-29 | Journal article
Contributors: Olawale Olufemi Adelowo; Andrew C Singer; Therese Helbig; Camila Knecht; Franziska Reincke; Ines Mäusezahl; Jochen A. Müller
Source: check_circle
Crossref

Detection of the carbapenemase gene blaVIM-5 in members of the Pseudomonas putida group isolated from polluted Nigerian wetlands

Scientific Reports
2018-10-11 | Journal article
Contributors: Olawale O. Adelowo; John Vollmers; Ines Mäusezahl; Anne-Kristin Kaster; Jochen A. Müller
Source: check_circle
Crossref

Draft Genome Sequence of Magnetospirillum sp. Strain 15-1, a Denitrifying Toluene Degrader Isolated from a Planted Fixed-Bed Reactor

Genome Announcements
2017 | Journal article
Source: Self-asserted source
Jochen A. Müller

Isolation and characterization of Magnetospirillum sp. strain 15-1 as a representative anaerobic toluene-degrader from a constructed wetland model

PLoS ONE
2017 | Journal article
EID:

2-s2.0-85016990631

Contributors: Meyer-Cifuentes, I.; Martinez-Lavanchy, P.M.; Marin-Cevada, V.; Böhnke, S.; Harms, H.; Müller, J.A.; Heipieper, H.J.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

Organic Micropollutants in the Environment: Ecotoxicity Potential and Methods for Remediation

ENHANCING CLEANUP OF ENVIRONMENTAL POLLUTANTS, VOL 1: BIOLOGICAL APPROACHES
2017 | Journal article
Contributors: Naeem Shahid
Source: check_circle
Web of Science Researcher Profile Sync

The sulfur depot in the rhizosphere of a common wetland plant, Juncus effusus, can support long-term dynamics of inorganic sulfur transformations

Chemosphere
2017 | Journal article
EID:

2-s2.0-85020458885

Contributors: Wiessner, A.; Kuschk, P.; Nguyen, P.M.; Müller, J.A.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier
grade
Preferred source (of 2)‎

Aerobic toluene degraders in the rhizosphere of a constructed wetland model show diurnal polyhydroxyalkanoate metabolism

Applied and Environmental Microbiology
2016 | Journal article
EID:

2-s2.0-84977571254

Contributors: Lünsmann, V.; Kappelmeyer, U.; Taubert, A.; Nijenhuis, I.; Von Bergen, M.; Heipieper, H.J.; Müller, J.A.; Jehmlich, N.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

Hydroponic root mats for wastewater treatment—a review

Environmental Science and Pollution Research
2016 | Journal article
EID:

2-s2.0-84966587887

Contributors: Chen, Z.; Cuervo, D.P.; Müller, J.A.; Wiessner, A.; Köser, H.; Vymazal, J.; Kästner, M.; Kuschk, P.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

In situprotein-SIP highlights Burkholderiaceae as key players degrading toluene by para ring hydroxylation in a constructed wetland model

Environmental Microbiology
2016 | Journal article
EID:

2-s2.0-84955144680

Contributors: Lünsmann, V.; Kappelmeyer, U.; Benndorf, R.; Martinez-Lavanchy, P.M.; Taubert, A.; Adrian, L.; Duarte, M.; Pieper, D.H.; von Bergen, M.; Müller, J.A. et al.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

Injection of hydrogen gas stimulates acid mine drainage treatment in laboratory-scale hydroponic root mats

Engineering in Life Sciences
2016 | Journal article
EID:

2-s2.0-84978733128

Contributors: Richter, J.; Wiessner, A.; Zehnsdorf, A.; Müller, J.A.; Kuschk, P.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

Removal of pathogen indicators from secondary effluent using slow sand filtration: Optimization approaches

Ecological Engineering
2016 | Journal article
EID:

2-s2.0-84979220863

Contributors: Seeger, E.M.; Braeckevelt, M.; Reiche, N.; Müller, J.A.; Kästner, M.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

Sanitation in constructed wetlands: A review on the removal of human pathogens and fecal indicators

Science of the Total Environment
2016 | Journal article
EID:

2-s2.0-84941895645

Contributors: Wu, S.; Carvalho, P.N.; Müller, J.A.; Manoj, V.R.; Dong, R.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

Role of plants in nitrogen and sulfur transformations in floating hydroponic root mats: A comparison of two helophytes

Journal of Environmental Management
2016-10 | Journal article
Contributors: Rania A.B. Saad; Peter Kuschk; Arndt Wiessner; Uwe Kappelmeyer; Jochen A. Müller; Heinz Köser
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Selective elimination of bacterial faecal indicators in the Schmutzdecke of slow sand filtration columns

Applied Microbiology and Biotechnology
2015 | Journal article
EID:

2-s2.0-84947031985

Contributors: Pfannes, K.R.; Langenbach, K.M.W.; Pilloni, G.; Stührmann, T.; Euringer, K.; Lueders, T.; Neu, T.R.; Müller, J.A.; Kästner, M.; Meckenstock, R.U.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

Microbial toluene removal in hypoxic model constructed wetlands occurs predominantly via the ring monooxygenation pathway

Applied and Environmental Microbiology
2015-07-06 | Journal article
Source: Self-asserted source
Jochen A. Müller
grade
Preferred source (of 2)‎

Environmental pollution by wastewater from brown coal processing - A remediation case study in Germany

Journal of Environmental Engineering and Landscape Management
2014 | Journal article
EID:

2-s2.0-84897865746

Contributors: Wiessner, A.; Müller, J.A.; Kuschk, P.; Kappelmeyer, U.; Kästner, M.; Liu, Y.-J.; Stottmeister, U.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

Transcriptional profiling of Gram-positive Arthrobacter in the phyllosphere: Induction of pollutant degradation genes by natural plant phenolic compounds

Environmental Microbiology
2014 | Journal article
EID:

2-s2.0-84903794566

Contributors: Scheublin, T.R.; Deusch, S.; Moreno-Forero, S.K.; Müller, J.A.; van der Meer, J.R.; Leveau, J.H.J.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

Treatment of a sulfate-rich groundwater contaminated with perchloroethene in a hydroponic plant root mat filter and a horizontal subsurface flow constructed wetland at pilot-scale

Chemosphere
2014-12-31 | Journal article
Source: Self-asserted source
Jochen A. Müller
grade
Preferred source (of 2)‎

Microbial reductive dehalogenation of vinyl chloride

2014-02-11 | Patent
PAT:

8,647,824

Source: Self-asserted source
Jochen A. Müller

Dehalococcoides mccartyi gen. nov., sp. nov., obligately organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidia classis nov., order Dehalococcoidales ord. nov. and family Dehalococcoidaceae fam. nov., within the phylum Chloroflexi

International Journal of Systematic and Evolutionary Microbiology
2013 | Journal article
EID:

2-s2.0-84874041126

Contributors: Löffler, F.E.; Yan, J.; Ritalahti, K.M.; Adrian, L.; Edwards, E.A.; Konstantinidis, K.T.; Müller, J.A.; Fullerton, H.; Zinder, S.H.; Spormann, A.M.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

Influence of nitrate load on sulfur transformations in the rhizosphere of Juncus effusus in laboratory-scale constructed wetlands treating artificial domestic wasewater

Environmental Engineering and Management Journal
2013 | Journal article
EID:

2-s2.0-84880658875

Contributors: Wu, S.; Wiessner, A.; Braeckevelt, M.; Kappelmeyer, U.; Dong, R.; Müller, J.A.; Kuschk, P.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

Ipso-hydroxylation and subsequent fragmentation: A novel microbial strategy to eliminate sulfonamide antibiotics

Applied and Environmental Microbiology
2013 | Journal article
EID:

2-s2.0-84884236979

Contributors: Ricken, B.; Corvini, P.F.X.; Cichocka, D.; Parisi, M.; Lenz, M.; Wyss, D.; Martínez-Lavanchy, P.M.; Müller, J.A.; Shahgaldian, P.; Tulli, L.G. et al.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

Sulphur transformations in constructed wetlands for wastewater treatment: A review

Ecological Engineering
2013 | Journal article
EID:

2-s2.0-84874345787

Contributors: Wu, S.; Kuschk, P.; Wiessner, A.; Müller, J.; Saad, R.A.B.; Dong, R.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

Genome-wide responses of the model archaeon Halobacterium sp. strain NRC-1 to oxygen limitation

Journal of Bacteriology
2012 | Journal article
EID:

2-s2.0-84868535169

Contributors: DasSarma, P.; Zamora, R.C.; Müller, J.A.; Dassarma, S.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

Localized plasticity in the streamlined genomes of vinyl chloride respiring Dehalococcoides

PLoS Genetics
2009 | Journal article
EID:

2-s2.0-73649122427

Contributors: McMurdie, P.J.; Behrens, S.F.; Müller, J.A.; Göke, J.; Ritalahti, K.M.; Wagner, R.; Goltsman, E.; Lapidus, A.; Holmes, S.; Löffler, F.E. et al.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

Extremely radiation-resistant mutants of a halophilic archaeon with increased single-stranded DNA-binding protein (RPA) gene expression

Radiation Research
2007 | Journal article
EID:

2-s2.0-35548976144

Contributors: DeVeaux, L.C.; Müller, J.A.; Smith, J.; Petrisko, J.; Wells, D.P.; DasSarma, S.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

Transcriptional profiling of the model Archaeon Halobacterium sp. NRC-I: Responses to changes in salinity and temperature

Saline Systems
2007 | Journal article
EID:

2-s2.0-36048979618

Contributors: Coker, J.A.; DasSarma, P.; Kumar, J.; Müller, J.A.; DasSarma, S.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

27 Genetic Systems for Halophilic Archaea

Methods in Microbiology
2006 | Book
EID:

2-s2.0-39049103389

Contributors: Berquist, B.R.; Müller, J.A.; DasSarma, S.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier
grade
Preferred source (of 2)‎

Terrestrial models for extraterrestrial life: Methanogens and halophiles at Martian temperatures

International Journal of Astrobiology
2006 | Journal article
EID:

2-s2.0-33750338843

Contributors: Reid, I.N.; Sparks, W.B.; Lubow, S.; McGrath, M.; Livio, M.; Valenti, J.; Sowers, K.R.; Shukla, H.D.; MacAuley, S.; Miller, T. et al.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

Post-genomics of the model haloarchaeon Halobacterium sp. NRC-1

Saline Systems
2006-03-16 | Journal article
Source: Self-asserted source
Jochen A. Müller

Genomic analysis of anaerobic respiration in the archaeon Halobacterium sp. strain NRC-1: Dimethyl sulfoxide and trimethylamine N-oxide as terminal electron acceptors

Journal of Bacteriology
2005 | Journal article
EID:

2-s2.0-14244250412

Contributors: Müller, J.A.; DasSarma, S.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

UV irradiation induces homologous recombination genes in the model archaeon, Halobacterium sp. NRC-1

Saline Systems
2005-07-04 | Journal article
Source: Self-asserted source
Jochen A. Müller

Molecular identification of the catabolic vinyl chloride reductase from Dehalococcoides sp. strain VS and its environmental distribution

Applied and Environmental Microbiology
2004 | Journal article
EID:

2-s2.0-4143085164

Contributors: Müller, J.A.; Rosner, B.M.; Von Abendroth, G.; Meshulam-Simon, G.; McCarty, P.L.; Spormann, A.M.
Source: Self-asserted source
Jochen A. Müller via Scopus - Elsevier

Initiation of Anaerobic Degradation of p-Cresol by Formation of 4-Hydroxybenzylsuccinate inDesulfobacterium cetonicum

Journal of Bacteriology
2001 | Journal article
Source: Self-asserted source
Jochen A. Müller
Items per page:
Page 1 of 2

Peer review (220 reviews for 33 publications/grants)

Review activity for ACS omega. (1)
Review activity for Applied and environmental microbiology. (121)
Review activity for Applied and environmental soil science. (1)
Review activity for Applied microbiology and biotechnology. (7)
Review activity for Chemosphere. (3)
Review activity for Clean. (1)
Review activity for Current microbiology. (1)
Review activity for Ecohydrology & Hydrobiology. (2)
Review activity for Environmental engineering science. (1)
Review activity for Environmental microbiology. (1)
Review activity for Environmental pollution. (5)
Review activity for Environmental processes. (1)
Review activity for Environmental reviews. (1)
Review activity for Environmental science & technology. (2)
Review activity for Environmental science and pollution research international (4)
Review activity for Environmental science and pollution research international (3)
Review activity for FEMS microbiology ecology. (1)
Review activity for Frontiers in microbiology. (3)
Review activity for Frontiers of Environmental Science & Engineering. (2)
Review activity for International journal of environmental research and public health (13)
Review activity for Journal of applied microbiology (1)
Review activity for Journal of bacteriology. (1)
Review activity for Journal of environmental engineering. (1)
Review activity for Journal of environmental management. (4)
Review activity for Journal of hazardous materials. (5)
Review activity for Journal of oceanology and limnology. (2)
Review activity for Microorganisms. (1)
Review activity for Ozone : (2)
Review activity for Science of the total environment. (3)
Review activity for Sustainability. (1)
Review activity for Water research. (6)
Review activity for Water science & technology. (4)
Review activity for Water. (15)