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RISM computations

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Scopus Author ID: 7006659212
ResearcherID: O-2214-2013
SciProfiles: 1521254

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Russia

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Institute of Mathematical Problems of Biology, Russian Academy of Sciences: Pushchino, Moscow Region, RU

Employment
Source: Self-asserted source
Dmitry Tikhonov

Works (48)

Theory of Liquids for Studying the Conformational Flexibility of Biomolecules with Reference Interaction Site Model Approximation

Physics
2023-12-13 | Journal article
DOI: 10.3390/physics5040073
Contributors: Alexey Danilkovich; Dmitry Tikhonov
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Changes in Protein Structural Motifs upon Post-Translational Modification in Kidney Cancer

Diagnostics
2021-10-04 | Journal article
DOI: 10.3390/diagnostics11101836
Contributors: Dmitry Tikhonov; Liudmila Kulikova; Vladimir Rudnev; Arthur T. Kopylov; Amir Taldaev; Alexander Stepanov; Kristina Malsagova; Alexander Izotov; Dmitry Enikeev; Natalia Potoldykova et al.
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Use of the Molecular Dynamics Method to Investigate the Stability of α-α-Corner Structural Motifs in Proteins

Symmetry
2021-07-02 | Journal article
DOI: 10.3390/sym13071193
Contributors: Vladimir R. Rudnev; Liudmila I. Kulikova; Anna L. Kaysheva; Alexander V. Efimov; Dmitry A. Tikhonov
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Emergence of Self-Organized Dynamical Domains in a Ring of Coupled Population Oscillators

Mathematics
2021-03-11 | Journal article
DOI: 10.3390/math9060601
Contributors: Alexey V. Rusakov; Dmitry A. Tikhonov; Nailya I. Nurieva; Alexander B. Medvinsky
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Super Secondary Structures of Proteins with Post-Translational Modifications in Colon Cancer

Molecules
2020-07-09 | Journal article
DOI: 10.3390/molecules25143144
Contributors: Dmitry Tikhonov; Liudmila Kulikova; Arthur Kopylov; Kristina Malsagova; Alexander Stepanov; Vladimir Rudnev; Anna Kaysheva
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Biogels. On comparison of structure differences in anti-parallel and parallel complexes with syn-layers of the H-(RADA)<sub>4</sub>-OH peptides.

Keldysh Institute Preprints
2019 | Journal article
DOI: 10.20948/prepr-2019-72
Contributors: Alexey Victorovich Danilkovich; Dmitry Anatol’evich Tikhonov
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On the correlation of time series in ecology of aquatic systems

Keldysh Institute Preprints
2019 | Journal article
DOI: 10.20948/prepr-2019-49
Contributors: Dmitry Anatol’evich Tikhonov; Alexander Berel’evich Medvinsky
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The study of interhelical distances of helical pairs in protein molecules

Keldysh Institute Preprints
2019 | Journal article
DOI: 10.20948/prepr-2019-40-e
Contributors: Dmitry Anatol’evich Tikhonov; Liudmila Ivanovna Kulikova; Alexander Vasil’evich Efimov
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Analysis of the areas and perimeters of polygons of the helices projections intersection in helical pairs of protein molecules

Keldysh Institute Preprints
2018 | Journal article
DOI: 10.20948/prepr-2018-59
Contributors: Dmitry Anatol’evich Tikhonov; Liudmila Ivanovna Kulikova; Alexander Vasil’evich Efimov
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Charge diffusion in homogeneous molecular chains based on the analysis of generalized frequency spectra in the framework of the Holstein model

Keldysh Institute Preprints
2018 | Journal article
DOI: 10.20948/prepr-2018-70-e
Contributors: Dmitry Anatol’evich Tikhonov; Egor Vasil’evich Sobolev; Victor Dmitrievich Lakhno
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Database of two-helical motifs of protein molecules and computer services for their analysis

Keldysh Institute Preprints
2018 | Journal article
DOI: 10.20948/prepr-2018-185
Contributors: Vladimir Removich Rudnev; Dmitry Anatol’evich Tikhonov; Liudmila Ivanovna Kulikova; Mikhail Yur’evich Gubin; Alexander Vasil’evich Efimov
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The Study of Interhelical Angles in Pairs of Helices in Protein Molecules

Keldysh Institute Preprints
2018 | Journal article
DOI: 10.20948/prepr-2018-176-e
Contributors: Dmitry Anatol’evich Tikhonov; Liudmila Ivanovna Kulikova; Alexander Vasil’evich Efimov
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The study of the torsion angles between helical axes in pairs of helices in protein molecules

Keldysh Institute Preprints
2018 | Journal article
DOI: 10.20948/prepr-2018-91-e
Contributors: Dmitry Anatol’evich Tikhonov; Liudmila Ivanovna Kulikova; Alexander Vasil’evich Efimov
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Methods of the theory of liquids as an efficient approach to the analysis of polar peptide complexes

Doklady Physical Chemistry
2013 | Journal article
DOI:

10.1134/S0012501613050060
Contributors: Sobolev, E.V.; Danilkovich, A.V.; Udovichenko, I.P.; Lipkin, V.M.; Tikhonov, D.A.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Recognition and Stability Analysis of Structural Motifs of α-α-corner Type in Globular Proteins

Mathematical Biology and Bioinformatics
2013 | Journal article
EID: 2-s2.0-84885350725
Contributors: Rudnev, V.R.; Pankratov, A.N.; Kulikova, L.I.; Dedus, F.F.; Tikhonov, D.A.; Efimov, A.V.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Distinctive H-(RLDL)4-OH peptide complexes potentiate nanostructure self-assembling in water

Doklady Biochemistry and Biophysics
2012 | Journal article
DOI:

10.1134/S160767291202010X
Contributors: Danilkovich, A.V.; Sobolev, E.V.; Tikhonov, D.A.; Udovichenko, I.P.; Lipkin, V.M.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

RISM integral equation theory in study of thermodynamics of self-assembling ionic peptides

Mathematical Biology and Bioinformatics
2012 | Journal article
EID: 2-s2.0-84877716634
Contributors: Sobolev, E.V.; Danilkovich, A.V.; Tikhonov, D.A.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Estimating the gibbs energy of hydration from molecular dynamics trajectories obtained by integral equations of the theory of liquids in the RISM approximation

Russian Journal of Physical Chemistry A
2011 | Journal article
DOI:

10.1134/S0036024411030307
Contributors: Tikhonov, D.A.; Sobolev, E.V.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Online resource for theoretical study of hydration of biopolymers

SAR and QSAR in Environmental Research
2008 | Journal article
DOI:

10.1080/10629360802083707
Contributors: Sobolev, E.V.; Sobolev, O.V.; Tikhonov, D.A.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Chaos and fractals in fish school motion, II

Chaos, Solitons and Fractals
2003 | Journal article
DOI:

10.1016/S0960-0779(02)00319-3
Contributors: Tikhonov, D.A.; Malchow, H.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Spatio-temporal pattern formation, fractals, and chaos in conceptual ecological models as applied to coupled plankton-fish dynamics

Physics-Uspekhi
2002 | Journal article
DOI:

10.1070/PU2002v045n01ABEH000980
Contributors: Medvinskiǐ, A.B.; Petrovskiǐ, S.V.; Tikhonova, I.A.; Tikhonov, D.A.; Li, B.-L.; Venturino, E.; Malchow, H.; Ivanitskiǐ, G.R.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Biological factors underlying regularity and chaos in aquatic ecosystems: Simple models of complex dynamics

Journal of Biosciences
2001 | Journal article
EID: 2-s2.0-0035100727
Contributors: Medvinsky, A.B.; Petrovskii, S.V.; Tikhonov, D.A.; Tikhonova, I.A.; Ivanitsky, G.R.; Venturino, E.; Malchow, H.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Chaos and fractals in fish school motion

Chaos, solitons and fractals
2001 | Journal article
DOI:

10.1016/S0960-0779(00)00049-7
Contributors: Tikhonov, D.A.; Enderlein, J.; Malchow, H.; Medvinsky, A.B.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Estimates of hydrophobic interactions in oligomeric hydrocarbons by the RISM method

Russian Journal of Physical Chemistry A
2000 | Journal article
EID: 2-s2.0-0034341437
Contributors: Golovanov, I.B.; Tikhonov, D.A.; Tsygankova, I.G.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Singularities of solution of the Ornstein-Zernike equation within a gas-liquid transition region

Russian Journal of Physical Chemistry A
2000 | Journal article
EID: 2-s2.0-0034343312
Contributors: Tikhonov, D.A.; Sarkisov, G.N.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Spatio-temporal pattern formation in coupled models of plankton dynamics and fish school motion

Nonlinear Analysis: Real World Applications
2000 | Journal article
EID: 2-s2.0-0034147306
Contributors: Malchow, H.; Radtke, B.; Kallache, M.; Medvinsky, A.B.; Tikhonov, D.A.; Petrovskii, S.V.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

The RISM method for estimating hydrophobic intramolecular interactions between distant groups

Russian Journal of Physical Chemistry A
2000 | Journal article
EID: 2-s2.0-0034341903
Contributors: Golovanov, I.B.; Tikhonov, D.A.; Tsygankova, I.G.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

A model of solvation of molecules with cavities: The method of integral equations of the theory of liquids

Russian Journal of Physical Chemistry A
1999 | Journal article
EID: 2-s2.0-0033240316
Contributors: Tikhonov, D.A.; Polozov, R.V.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Evaluations of hydrophobic interactions in the complexes of hydrocarbon molecules by the method of integral equations

Doklady Physical Chemistry
1999 | Journal article
EID: 2-s2.0-27144477042
Contributors: Golovanov, I.B.; Ivanitskii, G.R.; Tikhonov, D.A.; Tsygankova, I.G.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Singlet integral equation approaches in the statistical theory of surface phenomena in liquids

Journal of Molecular Liquids
1999 | Journal article
EID: 2-s2.0-0039106484
Contributors: Tikhonov, D.A.; Kiselyov, O.E.; Martynov, G.A.; Sarkisov, G.N.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

The RISM method for estimating the thermodynamic characteristics of hydration of molecules

Russian Journal of Physical Chemistry A
1999 | Journal article
EID: 2-s2.0-0033211836
Contributors: Tikhonov, D.A.; Tsygankova, I.G.; Golovanov, I.B.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Hydration of a B-DNA fragment in the method of atom-atom correlation functions with the reference interaction site model approximation

Journal of Chemical Physics
1998 | Journal article
DOI:

10.1063/1.476704
Contributors: Tikhonov, D.A.; Polozov, R.V.; Timoshenko, E.G.; Kuznetsov, Yu.A.; Gorelov, A.V.; Dawson, K.A.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Aperiodic structures in motile cell societies: Mathematical simulation

Biofizika
1997 | Journal article
Part of ISSN:

0006-3029
Contributors: Medvinsky, AB; Lysochenko, IV; Tikhonov, DA; Tsyganov, MA; Kravchenko, VV; Ivanitsky, GR
Source: Self-asserted source
Dmitry Tikhonov via ResearcherID

Hydration of B-DNA fragment d(GGGGG). Integral equations theory of liquid

Biofizika
1997 | Journal article
Part of ISSN:

0006-3029
Contributors: Tikhonov, DA; Polozov, RV; Gorelov, AV; Timoshenko, EG; Kuznetsov, YA; Panchenko, LA; Dawson, KA
Source: Self-asserted source
Dmitry Tikhonov via ResearcherID

Integral equations theory of liquid for studying of hydration of macromolecules

Biofizika
1997 | Journal article
Part of ISSN:

0006-3029
Contributors: Tikhonov, DA; Polozov, RV; Gorelov, AV; Timoshenko, EG; Kuznetsov, YA; Panchenko, LA; Dawson, KA
Source: Self-asserted source
Dmitry Tikhonov via ResearcherID

The method of atom-atom correlation functions for studying the influence of nonpolar chains on the properties of water as a solvent

Russian Journal of Physical Chemistry A
1997 | Journal article
EID: 2-s2.0-0031514670
Contributors: Tikhonov, D.A.; Sarkisov, G.N.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

A study of linear structures in solution by the method of atom-atom correlation functions

Russian Journal of Physical Chemistry A
1996 | Journal article
EID: 2-s2.0-0030510092
Contributors: Tikhonov, D.A.; Sarkisov, G.N.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Local structure of solvation of nonpolar chains in nonpolar solvents at infinite dilution

Journal of Structural Chemistry
1996 | Journal article
EID: 2-s2.0-27544431594
Contributors: Tikhonov, D.A.; Sarkisov, G.N.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Role of water structure in thermodynamics of nonpolar solvation

Journal of Structural Chemistry
1996 | Journal article
EID: 2-s2.0-27544471903
Contributors: Sarkisov, G.N.; Tikhonov, D.A.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Thermodynamic properties of solvation of nonpolar compounds within the site-site approximation

Russian Journal of Physical Chemistry A
1996 | Journal article
EID: 2-s2.0-0030359868
Contributors: Tikhonov, D.A.; Sarkisov, G.N.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Ultrasonic approach to obtaining partial thermodynamic characteristics of solutions

Ultrasonics
1995 | Journal article
EID: 2-s2.0-0029330350
Contributors: Tikhonov, D.A.; Kiselyov, O.E.; Sarvazyan, A.P.; Sarkisov, G.N.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

CONCENTRATION-DEPENDENCE OF ACOUSTIC NONLINEARITY PARAMETER IN SOLUTIONS

Acoustical Physics
1993 | Journal article
Part of ISSN:

1063-7710
Contributors: SARKISOV, GN; TIKHONOV, DA
Source: Self-asserted source
Dmitry Tikhonov via ResearcherID

DETERMINATION OF THE NONLINEARITY PARAMETER B/A IN THE THEORY OF LIQUIDS

Acoustical Physics
1993 | Journal article
Part of ISSN:

1063-7710
Contributors: SARKISOV, GN; TIKHONOV, DA
Source: Self-asserted source
Dmitry Tikhonov via ResearcherID

Determining the thermodynamic characteristics of a substance from measurements of the velocity of sound

Russian Ultrasonics
1993 | Journal article
EID: 2-s2.0-0027765122
Contributors: Kiselev, O.E.; Tikhonov, D.A.; Sarkisov, G.N.; Sarvazyan, A.P.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Martynov-Sarkisov integral equation for the simple fluids

The Journal of Chemical Physics
1993 | Journal article
EID: 2-s2.0-0004739166
Contributors: Sarkisov, G.; Tikhonov, D.; Malinsky, J.; Magarshak, Yu.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

Thermodynamic and structural properties of a fluid with a rectangular well potential

Journal of Structural Chemistry
1993 | Journal article
DOI:

10.1007/BF00761477
Contributors: Sarkisov, G.N.; Tikhonov, D.A.; Malinskii, D.; Magarshak, Yu.
Source: Self-asserted source
Dmitry Tikhonov via Scopus - Elsevier

DIPOLE FLUID NEAR A SURFACE - METHOD OF PERTURBATION-THEORY - SINGLET APPROXIMATION

Colloid Journal of the USSR
1992 | Journal article
Part of ISSN:

1061-933X
Contributors: AGRAFONOV, YV; TIKHONOV, DA; SARKISOV, GN; MARTYNOV, GA
Source: Self-asserted source
Dmitry Tikhonov via ResearcherID

1ST-ORDER APPROXIMATION IN THE STATISTICAL-THEORY OF SURFACE PHENOMENA IN LIQUIDS

Colloid Journal of the USSR
1991 | Journal article
Part of ISSN:

0010-1303
Contributors: TIKHONOV, DA; AGRAFONOV, YV; MARTYNOV, GA; SARKISOV, GN; PAVLOV, AN
Source: Self-asserted source
Dmitry Tikhonov via ResearcherID
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