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Works (43)

Effects of the COVID-19 pandemic on TB outcomes in the United States: a Bayesian analysis

Clinical Infectious Diseases
2025-02-27 | Journal article
DOI: 10.1093/cid/ciaf092
Contributors: Nicole A Swartwood; Ted Cohen; Suzanne M Marks; Andrew N Hill; Garrett R Beeler Asay; Julie Self; Pei-Jean I Feng; C Robert Horsburgh, Jr; Joshua A Salomon; Nicolas A Menzies
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Bayesian Evidence Synthesis to Infer Unobserved Population Dynamics: An Application to International Migration Into the United States, 2000–2019

Populations
2025-01-29 | Journal article
DOI: 10.3390/populations1010003
Contributors: Nicolas A. Menzies
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Quantifying the spatiotemporal dynamics of the first two epidemic waves of SARS-CoV-2 infections in the United States

2025-01-08 | Preprint
DOI: 10.1101/2025.01.08.24319433
Contributors: Rafael Lopes; Nicole A. Swartwood; Yu Lan; Melanie H. Chitwood; Fayette Klaassen; Joshua A. Salomon; Nicolas A. Menzies; Joshua L. Warren; Nathan D. Grubaugh; Ted Cohen
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Long-term mortality trends among individuals with tuberculosis: a retrospective cohort study of individuals diagnosed with tuberculosis in Brazil

2024-11-21 | Preprint
DOI: 10.1101/2024.11.20.24317659
Contributors: Sun Kim; Daniele M. Pelissari; Luiza O. Harada; Mauro Sanchez; Patricia Bartholomay Oliveira; Fernanda D. C. Johansen; Ethel L. N. Maciel; Ted Cohen; Marcia C. Castro; Nicolas A. Menzies
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Statistical Relationship Between Wastewater Data and Case Notifications for COVID-19 Surveillance in the United States, 2020-2023: A Bayesian Hierarchical Model (Preprint)

2024-11-01 | Preprint
DOI: 10.2196/preprints.68213
Contributors: Masahiko Haraguchi; Fayette Klaassen; Ted Cohen; Joshua A. Salomon; Nicolas A. Menzies
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Statistical Relationship Between Wastewater Data and Case Notifications for COVID-19 Surveillance in the United States, 2020-2023: A Bayesian Hierarchical Model (Preprint)

JMIR Public Health and Surveillance
2024-11-01 | Journal article
DOI: 10.2196/68213
Contributors: Masahiko Haraguchi; Fayette Klaassen; Ted Cohen; Joshua A. Salomon; Nicolas A. Menzies
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Modelling the potential impact of global hepatitis B vaccination on the burden of chronic hepatitis B in the United States

Journal of Viral Hepatitis
2024-10 | Journal article
DOI: 10.1111/jvh.13982
Contributors: David W. Hutton; Mehlika Toy; Danwei Yang; Hanwen Zhang; Senad Handanagic; Paige A. Armstrong; Annemarie Wasley; Nicolas A. Menzies; Hang Pham; Joshua A. Salomon et al.
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Contribution of post-TB sequelae to life-years and quality-adjusted life-years lost due to TB disease in the United States, 2015-2019

2024-10-27 | Preprint
DOI: 10.1101/2024.10.25.24316143
Contributors: Nicolas A. Menzies; Suzanne M. Marks; Yuli L. Hsieh; Nicole A. Swartwood; Garrett R. Beeler Asay; Jacek Skarbinski; C. Robert Horsburgh; Ted Cohen
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National- and state-level SARS-CoV-2 immunity trends from January 2020 to December 2023: a mathematical modeling analysis

2024-10-23 | Preprint
DOI: 10.1101/2024.10.22.24315935
Contributors: Fayette Klaassen; Nicole A Swartwood; Melanie H Chitwood; Rafael Lopes; Masahiko Haraguchi; Joshua A Salomon; Ted Cohen; Nicolas A Menzies
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Statistical Relationship Between Wastewater Data and Case Notifications for COVID-19 Surveillance in the United States, 2020-2023: A Bayesian Hierarchical Model

2024-10-21 | Preprint
DOI: 10.1101/2024.10.20.24315840
Contributors: Masahiko Haraguchi; Fayette Klaassen; Ted Cohen; Joshua A. Salomon; Nicolas A. Menzies
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Effects of the COVID-19 pandemic on TB outcomes in the United States: a Bayesian analysis

2024-10-18 | Preprint
DOI: 10.1101/2024.10.17.24315683
Contributors: Nicole A. Swartwood; Ted Cohen; Suzanne M. Marks; Andrew N. Hill; Garrett R. Beeler Asay; Julie Self; Pei-Jean I. Feng; C. Robert Horsburgh, Jr.; Joshua A. Salomon; Nicolas A. Menzies
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Cost-effectiveness of screening with transcriptional signatures for incipient TB among U.S. migrants

2024-10-09 | Preprint
DOI: 10.1101/2024.10.09.24315062
Contributors: Yuli Lily Hsieh; C Robert Horsburgh, Jr; Ted Cohen; Jeffrey W Miller; Joshua A Salomon; Nicolas A Menzies
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Implications of progressive lung damage and post-TB sequelae for the health benefits of prompt TB diagnosis in high HIV prevalence settings: a mathematical modeling analysis

2024-08-17 | Preprint
DOI: 10.1101/2024.08.12.24311198
Contributors: Melike Hazal Can; Sedona Sweeney; Brian W. Allwood; Susan E. Dorman; Ted Cohen; Nicolas A. Menzies
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Trends in syphilis prevalence by race and ethnicity among people who are pregnant in the United States 2016–2023

2024-07-26 | Preprint
DOI: 10.1101/2024.07.25.24310963
Contributors: Yizhi Liang; Nicolas A Menzies; Minttu M Rönn
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Health impact and cost-effectiveness of expanding routine immunization coverage in India through Intensified Mission Indradhanush

Health Policy and Planning
2024-06-03 | Journal article
DOI: 10.1093/heapol/czae024
Contributors: Emma Clarke-Deelder; Christian Suharlim; Susmita Chatterjee; Allison Portnoy; Logan Brenzel; Arindam Ray; Jessica L Cohen; Nicolas A Menzies; Stephen C Resch
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The Full Value of Vaccine Assessments Concept—Current Opportunities and Recommendations

Vaccines
2024-04-18 | Journal article
DOI: 10.3390/vaccines12040435
Contributors: Richard G. White; Nicolas A. Menzies; Allison Portnoy; Rebecca A. Clark; Cristiana M. Toscano; Charlotte Weller; Marta Tufet Bayona; Sheetal Prakash Silal; Ruth A. Karron; Jung-Seok Lee et al.
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Quantifying gaps in the tuberculosis care cascade in Brazil: A mathematical model study using national program data

PLOS Medicine
2024-03-21 | Journal article
DOI: 10.1371/journal.pmed.1004361
Contributors: Sivaram Emani; Amitabh Bipin Suthar; Kleydson Alves; Layana Costa Alves; Daiane Alves da Silva; Patricia Bartholomay Oliveira; Marcia C. Castro; Ted Cohen; Rodrigo de Macedo Couto; Mauro Sanchez et al.
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Predictive power of wastewater for nowcasting infectious disease transmission: A retrospective case study of five sewershed areas in Louisville, Kentucky

Environmental Research
2024-01 | Journal article
DOI: 10.1016/j.envres.2023.117395
Contributors: Fayette Klaassen; Rochelle H. Holm; Ted Smith; Ted Cohen; Aruni Bhatnagar; Nicolas A. Menzies
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Predictors of unsuccessful tuberculosis treatment outcomes in Brazil: an analysis of 259,484 patient records

2024-01-08 | Preprint
DOI: 10.1101/2024.01.05.24300846
Contributors: Do Kyung Ryuk; Daniele M Pelissari; Kleydson Alves; Patricia Bartholomay Oliveira; Marcia C Castro; Ted Cohen; Mauro Sanchez; Nicolas A Menzies
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In-kind nutritional supplementation for household contacts of persons with tuberculosis would be cost-effective for reducing tuberculosis incidence and mortality in India: a modeling study

2024-01-01 | Preprint
DOI: 10.1101/2023.12.30.23300673
Contributors: Pranay Sinha; Madolyn Dauphinais; Madeline E. Carwile; C. Robert Horsburgh, Jr.; Nicolas A. Menzies
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Combining genomic data and infection estimates to characterize the complex dynamics of SARS-CoV-2 Omicron variants in the United States

2023-11-08 | Preprint
DOI: 10.1101/2023.11.07.23298178
Contributors: Rafael Lopes; Kien Pham; Fayette Klaassen; Melanie H. Chitwood; Anne M. Hahn; Seth Redmond; Nicole A. Swartwood; Joshua A. Salomon; Nicolas A. Menzies; Ted Cohen et al.
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Health impact and cost-effectiveness of expanding routine immunization coverage in India through Intensified Mission Indradhanush: a quasi-experimental study and economic evaluation

2023-10-27 | Preprint
DOI: 10.1101/2023.10.27.23297516
Contributors: Emma Clarke-Deelder; Christian Suharlim; Susmita Chatterjee; Allison Portnoy; Logan Brenzel; Arindam Ray; Jessica Cohen; Nicolas A Menzies; Stephen C Resch
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Modelling the health and economic impacts of M72/AS01Evaccination and BCG-revaccination: estimates for South Africa

2023-10-05 | Preprint
DOI: 10.1101/2023.10.04.23296538
Contributors: Tom Sumner; Rebecca A. Clark; Christinah Mukandavire; Allison Portnoy; Chathika K. Weerasuriya; Roel Bakker; Danny Scarponi; Mark Hatherill; Nicolas A. Menzies; Richard G. White
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Global burden of disease due to rifampicin-resistant tuberculosis: a mathematical modeling analysis

Nature Communications
2023-10-04 | Journal article
DOI: 10.1038/s41467-023-41937-9
Contributors: Nicolas A. Menzies; Brian W. Allwood; Anna S. Dean; Pete J. Dodd; Rein M. G. J. Houben; Lyndon P. James; Gwenan M. Knight; Jamilah Meghji; Linh N. Nguyen; Andrea Rachow et al.
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Vaccination and Voting Patterns in the U.S.: Analysis of COVID-19 and Flu Surveys From 2010 to 2022

American Journal of Preventive Medicine
2023-09 | Journal article
DOI: 10.1016/j.amepre.2023.03.001
Contributors: Minttu M. Rönn; Nicolas A. Menzies; Joshua A. Salomon
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The potential health and economic impacts of new tuberculosis vaccines under varying delivery strategies in Delhi and Gujarat, India: a modelling study

2023-09-27 | Preprint
DOI: 10.1101/2023.09.27.23296211
Contributors: Rebecca A Clark; Allison Portnoy; Chathika K Weerasuriya; Tom Sumner; Roel Bakker; Rebecca C Harris; Kirankumar Rade; Sanjay Kumar Mattoo; Dheeraj Tumu; Nicolas A Menzies et al.
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Predictive power of wastewater for nowcasting infectious disease transmission: a retrospective case study of five sewershed areas in Louisville, Kentucky

2023-06-04 | Preprint
DOI: 10.1101/2023.05.31.23290619
Contributors: Fayette Klaassen; Rochelle H. Holm; Ted Smith; Ted Cohen; Aruni Bhatnagar; Nicolas A. Menzies
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Prioritizing Quality Measures in Acute Stroke Care

Annals of Internal Medicine
2023-05 | Journal article
DOI: 10.7326/M22-3186
Contributors: Jinyi Zhu; Hooman Kamel; Ajay Gupta; Alvin I. Mushlin; Nicolas A. Menzies; Thomas A. Gaziano; Meredith B. Rosenthal; Ankur Pandya
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Cost-effectiveness of monthly follow-up for the treatment of uncomplicated severe acute malnutrition: An economic evaluation of a randomized controlled trial

PLOS Global Public Health
2022-12-09 | Journal article
DOI: 10.1371/journal.pgph.0001189
Contributors: Nicolas A. Menzies; Dickson Abanimi Amugsi; Fatou Berthé; Matt Hitchings; Philip Aruna; Muhammed Ali Hamza; Siméon Nanama; Chizoba Steve-Edemba; Ibrahim Shehu; Rebecca F. Grais et al.
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Changes in population immunity against infection and severe disease from SARS-CoV-2 Omicron variants in the United States between December 2021 and November 2022

2022-11-20 | Preprint
DOI: 10.1101/2022.11.19.22282525
Contributors: Fayette Klaassen; Melanie H. Chitwood; Ted Cohen; Virginia E. Pitzer; Marcus Russi; Nicole A. Swartwood; Joshua A. Salomon; Nicolas A. Menzies
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A spatial-mechanistic model to estimate subnational tuberculosis burden with routinely collected data: An application in Brazilian municipalities

PLOS Global Public Health
2022-09-21 | Journal article
DOI: 10.1371/journal.pgph.0000725
Contributors: Melanie H. Chitwood; Julia Robinson; Layana C. Alves; Patrícia Bartholomay; Rodrigo M. Couto; Mauro Sanchez; Marcia C. Castro; Ted Cohen; Nicolas A. Menzies
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Population immunity to pre-Omicron and Omicron SARS-CoV-2 variants in US states and counties through December 1, 2021

2021-12-24 | Preprint
DOI: 10.1101/2021.12.23.21268272
Contributors: Fayette Klaassen; Melanie H. Chitwood; Ted Cohen; Virginia E. Pitzer; Marcus Russi; Nicole A. Swartwood; Joshua A. Salomon; Nicolas A. Menzies
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Impact of campaign-style delivery of routine vaccines: a quasi-experimental evaluation using routine health services data in India

Health Policy and Planning
2021-05-17 | Journal article
DOI: 10.1093/heapol/czab026
Contributors: Emma Clarke-Deelder; Christian Suharlim; Susmita Chatterjee; Logan Brenzel; Arindam Ray; Jessica L Cohen; Margaret McConnell; Stephen C Resch; Nicolas A Menzies
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Nowcasting for Real-Time COVID-19 Tracking in New York City: An Evaluation Using Reportable Disease Data From Early in the Pandemic

JMIR Public Health and Surveillance
2021-01-15 | Journal article
DOI: 10.2196/25538
Contributors: Sharon K Greene; Sarah F McGough; Gretchen M Culp; Laura E Graf; Marc Lipsitch; Nicolas A Menzies; Rebecca Kahn
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The efficiency of routine infant immunization services in six countries: a comparison of methods

Health Economics Review
2020-12 | Journal article
DOI: 10.1186/s13561-019-0259-1
Contributors: Nicolas A. Menzies; Christian Suharlim; Stephen C. Resch; Logan Brenzel
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Nowcasting for Real-Time COVID-19 Tracking in New York City: An Evaluation Using Reportable Disease Data From Early in the Pandemic (Preprint)

2020-11-05 | Other
DOI: 10.2196/preprints.25538
Contributors: Sharon K Greene; Sarah F McGough; Gretchen M Culp; Laura E Graf; Marc Lipsitch; Nicolas A Menzies; Rebecca Kahn
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Evaluation of Nowcasting for Real-Time COVID-19 Tracking — New York City, March–May 2020

2020-10-20 | Other
DOI: 10.1101/2020.10.18.20209189
Contributors: Sharon K. Greene; Sarah F. McGough; Gretchen M. Culp; Laura E. Graf; Marc Lipsitch; Nicolas A. Menzies; Rebecca Kahn
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Bayesian nowcasting with adjustment for delayed and incomplete reporting to estimate COVID-19 infections in the United States

2020-06-20 | Other
DOI: 10.1101/2020.06.17.20133983
Contributors: Melanie H. Chitwood; Marcus Russi; Kenneth Gunasekera; Joshua Havumaki; Virginia E. Pitzer; Joshua L. Warren; Daniel M. Weinberger; Ted Cohen; Nicolas A. Menzies
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Nowcasting by Bayesian Smoothing: A flexible, generalizable model for real-time epidemic tracking

PLOS Computational Biology
2020-04-06 | Journal article
DOI: 10.1371/journal.pcbi.1007735
Contributors: Sarah F. McGough; Bryan Lewis; Michael A. Johansson; Marc Lipsitch; Nicolas A. Menzies
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Incorporating costing study results into district and service planning to enhance immunization programme performance: a Zambian case study

Health Policy and Planning
2019-06-01 | Journal article
DOI: 10.1093/heapol/czz039
Contributors: Isabelle Feldhaus; Carl Schütte; Francis D Mwansa; Masauso Undi; Stanley Banda; Chris Suharlim; Nicolas A Menzies; Logan Brenzel; Stephen C Resch; Anthony Kinghorn
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The Impact of Screening and Partner Notification on Chlamydia Prevalence and Numbers of Infections Averted in the United States, 2000–2015: Evaluation of Epidemiologic Trends Using a Pair-Formation Transmission Model

American Journal of Epidemiology
2019-03-01 | Journal article
DOI: 10.1093/aje/kwy272
Contributors: Minttu M Rönn; Ashleigh R Tuite; Nicolas A Menzies; Emory E Wolf; Thomas L Gift; Harrell W Chesson; Elizabeth Torrone; Andrés Berruti; Emanuele Mazzola; Kara Galer et al.
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Prospects for Tuberculosis Elimination in the United States: Results of a Transmission Dynamic Model

American Journal of Epidemiology
2018-09-01 | Journal article
DOI: 10.1093/aje/kwy094
Contributors: Nicolas A Menzies; Ted Cohen; Andrew N Hill; Reza Yaesoubi; Kara Galer; Emory Wolf; Suzanne M Marks; Joshua A Salomon
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Evaluating the potential impact of enhancing HIV treatment and tuberculosis control programmes on the burden of tuberculosis

Journal of The Royal Society Interface
2015-05 | Journal article
DOI: 10.1098/rsif.2015.0146
Contributors: Leonid Chindelevitch; Nicolas A. Menzies; Carel Pretorius; John Stover; Joshua A. Salomon; Ted Cohen
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Peer review (17 reviews for 11 publications/grants)

Review activity for Clinical infectious diseases : (2)
Review activity for EClinicalMedicine. (2)
Review activity for Journal of infectious diseases. (1)
Review activity for PharmacoEconomics. (2)
Review activity for PLoS computational biology. (1)
Review activity for PLoS medicine. (2)
Review activity for PLoS neglected tropical diseases (1)
Review activity for PloS one. (1)
Review activity for The lancet. (1)
Review activity for The Lancet. (1)
Review activity for The Lancet. (3)
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