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Scopus Author ID: 56888041400
Loop profile: 1854669

Keywords

Bioinformatics, Cancer genomics, Immunogenetics

Countries

China

Biography

Bioinformatics and Genetics, Ph.D.

Activities

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Employment (2)

Children's Hospital of Philadelphia: Philadelphia, Pennsylvania, US

2021-10-23 to present | Postdoc (Computational and Genomic Medicine)
Employment
Source: Self-asserted source
Chun-Jie Liu

Huazhong University of Science and Technology: Wuhan, Hubei, CN

2018-06-12 to 2021-10-23 | Postdoc (The College of Life Science and Technology)
Employment
Source: Self-asserted source
Chun-Jie Liu

Education and qualifications (3)

Huazhong University of Science and Technology: Wuhan, Hubei, CN

2014-09-01 to 2018-06-09 | Doctor of Philosophy (The College of Life Science and Technology)
Education
Source: Self-asserted source
Chun-Jie Liu

University of Texas Health Science Center at Houston: TX, TX, US

2016-10-15 to 2017-10-15
Education
Source: Self-asserted source
Chun-Jie Liu

Huazhong University of Science and Technology: Wuhan, Hubei, CN

2010-09-01 to 2014-06-15 | Bachelor of science (The College of Life Science and Technology)
Education
Source: Self-asserted source
Chun-Jie Liu

Funding (1)

The 65th China Postdoctoral Science Foundation Projects

Grant
China Postdoctoral Science Foundation (Beijing, CN)
GRANT_NUMBER:

2019M652623
Source: Self-asserted source
Chun-Jie Liu

Works (50 of 57)

Items per page:
Page 1 of 2

Comprehensive landscape of small non‐coding RNAs in large and small extracellular vesicles from human serum and plasma

Interdisciplinary Medicine
2025-03 | Journal article
DOI: 10.1002/INMD.20240073
Contributors: Gui‐Yan Xie; Yi‐Han Deng; Chun‐Jie Liu; An‐Yuan Guo; Qian Lei
Source: check_circle
Crossref

GSCA: an integrated platform for gene set cancer analysis at genomic, pharmacogenomic and immunogenomic levels

Briefings in Bioinformatics
2023-01-19 | Journal article
DOI: 10.1093/bib/bbac558
Contributors: Chun-Jie Liu; Fei-Fei Hu; Gui-Yan Xie; Ya-Ru Miao; Xin-Wen Li; Yan Zeng; An-Yuan Guo
Source: check_circle
Crossref

A Long-Term Clearing Cranial Window for Longitudinal Imaging of Cortical and Calvarial Ischemic Injury through the Intact Skull

Advanced Science
2022 | Journal article
DOI: 10.1002/advs.202105893
EID:

2-s2.0-85127671034

Part of ISSN: 21983844
Contributors: Zhang, C.; Liu, C.-J.; Feng, W.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

Multi-omics characterization of autophagy-related molecular features for therapeutic targeting of autophagy

Nature Communications
2022-10-26 | Journal article
DOI: 10.1038/s41467-022-33946-x
Contributors: Mei Luo; Lin Ye; Ruimin Chang; Youqiong Ye; Zhao Zhang; Chunjie Liu; Shengli Li; Ying Jing; Hang Ruan; Guanxiong Zhang et al.
Source: check_circle
Crossref

EVAtool: an optimized reads assignment tool for small ncRNA quantification and its application in extracellular vesicle datasets

Briefings in Bioinformatics
2022-09-20 | Journal article
DOI: 10.1093/bib/bbac310
Contributors: Gui-Yan Xie; Chun-Jie Liu; An-Yuan Guo
Source: check_circle
Crossref

A comprehensive platelet expression atlas (PEA) resource and platelet transcriptome landscape

American Journal of Hematology
2022-01 | Journal article
DOI: 10.1002/ajh.26393
Contributors: Gui‐Yan Xie; Chun‐Jie Liu; Ya‐Ru Miao; Mengxuan Xia; Qiong Zhang; An‐Yuan Guo
Source: check_circle
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grade
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EVAtlas: a comprehensive database for ncRNA expression in human extracellular vesicles

Nucleic Acids Research
2022-01-07 | Journal article
DOI: 10.1093/nar/gkab668
Contributors: Chun-Jie Liu; Gui-Yan Xie; Ya-Ru Miao; Mengxuan Xia; Yi Wang; Qian Lei; Qiong Zhang; An-Yuan Guo
Source: check_circle
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grade
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CCLA: An accurate method and web server for cancer cell line authentication using gene expression profiles

Briefings in Bioinformatics
2021 | Journal article
DOI: 10.1093/bib/bbaa093
EID:

2-s2.0-85107088473

Part of ISSN: 14774054 14675463
Contributors: Zhang, Q.; Luo, M.; Liu, C.-J.; Guo, A.-Y.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

Database resources of the national genomics data center, china national center for bioinformation in 2021

Nucleic Acids Research
2021 | Journal article
DOI: 10.1093/nar/gkaa1022
EID:

2-s2.0-85099427900

Part of ISSN: 13624962 03051048
Contributors: Xue, Y.; Bao, Y.; Zhang, Z.; Zhao, W.; Xiao, J.; He, S.; Zhang, G.; Li, Y.; Zhao, G.; Chen, R. et al.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

CBX2 and EZH2 Cooperatively Promote the Growth and Metastasis of Lung Adenocarcinoma

Molecular Therapy - Nucleic Acids
2021-12 | Journal article
DOI: 10.1016/j.omtn.2021.12.032
Contributors: Fei-Fei Hu; Hao Chen; Yang Duan; Bei Lan; Chun-Jie Liu; Hui Hu; Xu Dong; Qiong Zhang; Yi-Ming Cheng; Min Liu et al.
Source: check_circle
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A comprehensive survey for human transcription factors on expression, regulation, interaction, phenotype and cancer survival

Briefings in Bioinformatics
2021-09-02 | Journal article
DOI: 10.1093/bib/bbab002
Contributors: Hui Hu; Qiong Zhang; Fei-Fei Hu; Chun-Jie Liu; An-Yuan Guo
Source: check_circle
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grade
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Expression profile of immune checkpoint genes and their roles in predicting immunotherapy response

Briefings in Bioinformatics
2021-05-20 | Journal article
DOI: 10.1093/bib/bbaa176
Contributors: Fei-Fei Hu; Chun-Jie Liu; Lan-Lan Liu; Qiong Zhang; An-Yuan Guo
Source: check_circle
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grade
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Germline Mutation of PLCD1 Contributes to Human Multiple Pilomatricomas through Protein Kinase D/Extracellular Signal–Regulated Kinase1/2 Cascade and TRPV6

Journal of Investigative Dermatology
2021-03 | Journal article
DOI: 10.1016/j.jid.2020.05.121
Contributors: Kai Liu; Junyu Luo; Tingbin Ma; Muping Fang; Zhe Xu; Li Wang; Xiang Yang Zhang; Jingmin Wen; Chunjie Liu; Yanjie Cao et al.
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miRNASNP-v3: a comprehensive database for SNPs and disease-related variations in miRNAs and miRNA targets

Nucleic Acids Research
2021-01-08 | Journal article
DOI: 10.1093/nar/gkaa783
Contributors: Chun-Jie Liu; Xin Fu; Mengxuan Xia; Qiong Zhang; Zhifeng Gu; An-Yuan Guo
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

An ultra-sensitive T-cell receptor detection method for TCR-Seq and RNA-Seq data

Bioinformatics
2020 | Journal article
DOI: 10.1093/bioinformatics/btaa432
EID:

2-s2.0-85091808505

Part of ISSN: 14602059 13674803
Contributors: Chen, S.-Y.; Liu, C.-J.; Zhang, Q.; Guo, A.-Y.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

p.His16Arg of STXBP1 (MUNC18-1) Associated With Syntaxin 3B Causes Autosomal Dominant Congenital Nystagmus

Frontiers in Cell and Developmental Biology
2020 | Journal article
DOI: 10.3389/fcell.2020.591781
EID:

2-s2.0-85096174902

Part of ISSN: 2296634X
Contributors: Li, Y.; Jiang, L.; Wang, L.; Wang, C.; Liu, C.; Guo, A.; Liu, M.; Zhang, L.; Ma, C.; Zhang, X. et al.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

tRic: a user-friendly data portal to explore the expression landscape of tRNAs in human cancers

RNA Biology
2020 | Journal article
DOI: 10.1080/15476286.2019.1657744
EID:

2-s2.0-85071147451

Part of ISSN: 15558584 15476286
Contributors: Zhang, Z.; Ruan, H.; Liu, C.-J.; Ye, Y.; Gong, J.; Diao, L.; Guo, A.-Y.; Han, L.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

A Novel CDH1 Mutation Causing Reduced E-Cadherin Dimerization Is Associated with Nonsyndromic Cleft Lip with or without Cleft Palate

Genetic Testing and Molecular Biomarkers
2019 | Journal article
DOI: 10.1089/gtmb.2019.0092
EID:

2-s2.0-85074653131

Part of ISSN: 19450257 19450265
Contributors: Du, S.; Yang, Y.; Yi, P.; Luo, J.; Liu, T.; Chen, R.; Liu, C.-J.; Ma, T.; Li, Y.; Wang, C. et al.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

An ultrasensitive T-cell receptor detection method for TCR-Seq and RNA-Seq data

bioRxiv
2019 | Other
DOI: 10.1101/740340
EID:

2-s2.0-85095529758

Part of ISSN: 26928205
Contributors: Chen, S.-Y.; Zhang, Q.; Liu, C.-J.; Guo, A.-Y.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

CCLA: An accurate method and web server for cancer cell line authentication using gene expression profiles

bioRxiv
2019 | Other
DOI: 10.1101/858456
EID:

2-s2.0-85095549676

Part of ISSN: 26928205
Contributors: Zhang, Q.; Luo, M.; Liu, C.-J.; Guo, A.-Y.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

Comprehensive characterization of circular RNAs in ~ 1000 human cancer cell lines

Genome Medicine
2019 | Journal article
DOI: 10.1186/s13073-019-0663-5
EID:

2-s2.0-85071640549

Part of ISSN: 1756994X
Contributors: Ruan, H.; Xiang, Y.; Ko, J.; Li, S.; Jing, Y.; Zhu, X.; Ye, Y.; Zhang, Z.; Mills, T.; Feng, J. et al.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

GEDS: A gene expression display server for mRNAs, miRNAs and proteins

Cells
2019 | Journal article
DOI: 10.3390/cells8070675
EID:

2-s2.0-85086605883

Part of ISSN: 20734409
Contributors: Xia, M.; Liu, C.-J.; Zhang, Q.; Guo, A.-Y.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

Pancan-meQTL: A database to systematically evaluate the effects of genetic variants on methylation in human cancer

Nucleic Acids Research
2019 | Journal article
DOI: 10.1093/nar/gky814
EID:

2-s2.0-85059799061

Part of ISSN: 13624962 03051048
Contributors: Gong, J.; Wan, H.; Mei, S.; Ruan, H.; Zhang, Z.; Liu, C.; Guo, A.-Y.; Diao, L.; Miao, X.; Han, L.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

SAGD: A comprehensive sex-associated gene database from transcriptomes

Nucleic Acids Research
2019 | Journal article
DOI: 10.1093/nar/gky1040
EID:

2-s2.0-85059796409

Part of ISSN: 13624962 03051048
Contributors: Shi, M.-W.; Zhang, N.-A.; Shi, C.-P.; Liu, C.-J.; Luo, Z.-H.; Wang, D.-Y.; Guo, A.-Y.; Chen, Z.-X.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

Transcriptome and Regulatory Network Analyses of CD19-CAR-T Immunotherapy for B-ALL

Genomics, Proteomics & Bioinformatics
2019-04-01 | Journal article
DOI: 10.1016/j.gpb.2018.12.008
Contributors: Qiong Zhang; Hui Hu; Si-Yi Chen; Chun-Jie Liu; Fei-Fei Hu; Jianming Yu; Yaohui Wu; An-Yuan Guo
Source: check_circle
Crossref
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Comprehensive analysis of small nucleolar RNAs across in human cancers

Cancer Research
2018 | Conference paper
Source: Self-asserted source
Chun-Jie Liu

Global analysis of tRNA and translation factor expression reveals a dynamic landscape of translational regulation in human cancers

Communications Biology
2018 | Journal article
DOI: 10.1038/s42003-018-0239-8
EID:

2-s2.0-85067676984

Part of ISSN: 23993642
Contributors: Zhang, Z.; Ye, Y.; Gong, J.; Ruan, H.; Liu, C.-J.; Xiang, Y.; Cai, C.; Guo, A.-Y.; Ling, J.; Diao, L. et al.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

Global analysis of tRNA and translation factor expression reveals a dynamic landscape of translational regulation in human cancers

Communications biology
2018 | Journal article
Source: Self-asserted source
Chun-Jie Liu

GSCALite: a web server for gene set cancer analysis

Bioinformatics
2018 | Journal article
Source: Self-asserted source
Chun-Jie Liu

GSCALite: A web server for gene set cancer analysis

Bioinformatics
2018 | Journal article
DOI: 10.1093/bioinformatics/bty411
EID:

2-s2.0-85055607802

Part of ISSN: 14602059 13674803
Contributors: Liu, C.-J.; Hu, F.-F.; Xia, M.-X.; Han, L.; Zhang, Q.; Guo, A.-Y.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

Pancan-meQTL: a database to systematically evaluate the effects of genetic variants on methylation in human cancer

Nucleic acids research
2018 | Journal article
Source: Self-asserted source
Chun-Jie Liu

PancanQTL: Systematic identification of cis -eQTLs and trans -eQTLs in 33 cancer types

Nucleic Acids Research
2018 | Journal article
DOI: 10.1093/nar/gkx861
EID:

2-s2.0-85040922098

Part of ISSN: 13624962 03051048
Contributors: Gong, J.; Mei, S.; Liu, C.; Xiang, Y.; Ye, Y.; Zhang, Z.; Feng, J.; Liu, R.; Diao, L.; Guo, A.-Y. et al.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

SAGD: a comprehensive sex-associated gene database from transcriptomes

Nucleic acids research
2018 | Journal article
Source: Self-asserted source
Chun-Jie Liu

The genomic landscape and pharmacogenomic interactions of clock genes in cancer chronotherapy

Cell systems
2018 | Journal article
Source: Self-asserted source
Chun-Jie Liu

The Genomic Landscape and Pharmacogenomic Interactions of Clock Genes in Cancer Chronotherapy

Cell Systems
2018 | Journal article
DOI: 10.1016/j.cels.2018.01.013
EID:

2-s2.0-85042918115

Part of ISSN: 24054720 24054712
Contributors: Ye, Y.; Xiang, Y.; Ozguc, F.M.; Kim, Y.; Liu, C.-J.; Park, P.K.; Hu, Q.; Diao, L.; Lou, Y.; Lin, C. et al.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

A pan-cancer analysis of the expression and clinical relevance of small nucleolar RNAs in human cancer

Cell reports
2017 | Journal article
Source: Self-asserted source
Chun-Jie Liu

A Pan-cancer Analysis of the Expression and Clinical Relevance of Small Nucleolar RNAs in Human Cancer

Cell Reports
2017 | Journal article
DOI: 10.1016/j.celrep.2017.10.070
EID:

2-s2.0-85034082752

Part of ISSN: 22111247
Contributors: Gong, J.; Li, Y.; Liu, C.-J.; Xiang, Y.; Li, C.; Ye, Y.; Zhang, Z.; Hawke, D.H.; Park, P.K.; Diao, L. et al.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

LNCediting: A database for functional effects of RNA editing in lncRNAs

Nucleic Acids Research
2017 | Journal article
DOI: 10.1093/nar/gkw835
EID:

2-s2.0-85016162726

Part of ISSN: 13624962 03051048
Contributors: Gong, J.; Liu, C.; Liu, W.; Xiang, Y.; Diao, L.; Guo, A.-Y.; Han, L.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

lncRInter: a database of experimentally validated long non-coding RNA interaction

Journal of genetics and genomics
2017 | Journal article
Source: Self-asserted source
Chun-Jie Liu

PancanQTL: systematic identification of cis-eQTLs and trans-eQTLs in 33 cancer types

Nucleic acids research
2017 | Journal article
Source: Self-asserted source
Chun-Jie Liu

SegTool: A specifically expressed gene detection tool and applications in human tissue and single-cell sequencing data

Briefings in Bioinformatics
2017 | Journal article
DOI: 10.1093/bib/bbx074
EID:

2-s2.0-85057223216

Part of ISSN: 14774054 14675463
Contributors: Zhang, Q.; Liu, W.; Liu, C.; Lin, S.-Y.; Guo, A.-Y.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

SEGtool: a specifically expressed gene detection tool and applications in human tissue and single-cell sequencing data

Briefings in bioinformatics
2017 | Journal article
Source: Self-asserted source
Chun-Jie Liu

Tumor cell-derived microvesicles induced not epithelial-mesenchymal transition but apoptosis in human proximal tubular (HK-2) cells: Implications for renal impairment in multiple myeloma

International Journal of Molecular Sciences
2017 | Journal article
DOI: 10.3390/ijms18030513
EID:

2-s2.0-85014183433

Part of ISSN: 14220067 16616596
Contributors: Zhao, A.; Kong, F.; Liu, C.-J.; Yan, G.; Gao, F.; Guo, H.; Guo, A.-Y.; Chen, Z.; Li, Q.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

Tumor cell-derived microvesicles induced not epithelial-mesenchymal transition but apoptosis in human proximal tubular (HK-2) cells: Implications for renal impairment in multiple myeloma

International journal of molecular sciences
2017 | Journal article
Source: Self-asserted source
Chun-Jie Liu

lncRInter: A database of experimentally validated long non-coding RNA interaction

Journal of Genetics and Genomics
2017-05 | Journal article
DOI: 10.1016/j.jgg.2017.01.004
Contributors: Chun-Jie Liu; Changhan Gao; Zhaowu Ma; Renhuai Cong; Qiong Zhang; An-Yuan Guo
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

LNCediting: a database for functional effects of RNA editing in lncRNAs

Nucleic acids research
2016 | Journal article
Source: Self-asserted source
Chun-Jie Liu

Loss-of-function mutation in PMVK causes autosomal dominant disseminated superficial porokeratosis

Scientific reports
2016 | Journal article
Source: Self-asserted source
Chun-Jie Liu

Loss-of-function Mutation in PMVK Causes Autosomal Dominant Disseminated Superficial Porokeratosis

Scientific Reports
2016 | Journal article
DOI: 10.1038/srep24226
EID:

2-s2.0-84963665638

Part of ISSN: 20452322
Contributors: Wang, J.; Liu, Y.; Liu, F.; Huang, C.; Han, S.; Lv, Y.; Liu, C.-J.; Zhang, S.; Qin, Y.; Ling, L. et al.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

Whole exome sequencing identifies a novel NRL mutation in a Chinese family with autosomal dominant retinitis pigmentosa

Molecular Vision
2016 | Journal article
EID:

2-s2.0-84962252980

Part of ISSN: 10900535
Contributors: Gao, M.; Zhang, S.; Liu, C.; Qin, Y.; Archacki, S.; Jin, L.; Wang, Y.; Liu, F.; Chen, J.; Liu, Y. et al.
Source: Self-asserted source
Chun-Jie Liu via Scopus - Elsevier

Whole exome sequencing identifies a novel NRL mutation in a Chinese family with autosomal dominant retinitis pigmentosa

Molecular vision
2016 | Journal article
Source: Self-asserted source
Chun-Jie Liu
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