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MD, PhD, MSc

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Employment (7)

Norwegian University of Science and Technology: Trondheim, NO

2016-03-17 to present | Postdoc (Department of Molecular Medicine and Cancer Research)
Employment
Source: Self-asserted source
Åsmund Flobak

St Olav's University Hospital: Trondheim, NO

2016-02-01 to present | Residential Oncologist (The Cancer Clinic)
Employment
Source: Self-asserted source
Åsmund Flobak

Norwegian University of Science and Technology: Trondheim, NO

2011-09 to 2016-03-16 | PhD Fellow (Department of Molecular Medicine and Cancer Research)
Employment
Source: Self-asserted source
Åsmund Flobak

Ålesund Hospital: Ålesund, NO

2010-08-01 to 2011-07-31 | Residential Radiologist (Department of Radiology)
Employment
Source: Self-asserted source
Åsmund Flobak

St Olav's University Hospital: Trondheim, NO

2009-04-14 to 2009-12-31 | Residential Oncologist (The Cancer Clinic)
Employment
Source: Self-asserted source
Åsmund Flobak

Levanger Hospital: Levanger, NO

2006-08-15 to 2007-02-14 | Residential Medical Doctor (Department of Internal Medicine)
Employment
Source: Self-asserted source
Åsmund Flobak

Levanger Hospital: Levanger, NO

2006-02-15 to 2006-08-14 | Residential Medical Doctor (Department of Surgery)
Employment
Source: Self-asserted source
Åsmund Flobak

Education and qualifications (2)

Norwegian University of Science and Technology: Trondheim, NO

2007-08-15 to 2013-02-13 | MSc (Bionanotechnology)
Education
Source: Self-asserted source
Åsmund Flobak

Norwegian University of Science and Technology: Trondheim, NO

1999-08-15 to 2005-06-15 | MD (Medical School)
Education
Source: Self-asserted source
Åsmund Flobak

Works (23)

High-content morphological profiling by Cell Painting in 3D spheroids

2025-02-08 | Preprint
DOI: 10.1101/2025.02.05.636642
Contributors: Christa Ringers; David Holmberg; Åsmund Flobak; Polina Georgieva; Malin Jarvius; Martin Johansson; Anders Larsson; Dan Rosén; Brinton Seashore–Ludlow; Torkild Visnes et al.
Source: check_circle
Crossref

NeKo: a tool for automatic network construction from prior knowledge

2024-10-15 | Preprint
DOI: 10.1101/2024.10.14.618311
Contributors: Marco Ruscone; Eirini Tsirvouli; Andrea Checcoli; Denes Turei; Emmanuel Barillot; Julio Saez-Rodriguez; Loredana Martignetti; Åsmund Flobak; Laurence Calzone
Source: check_circle
Crossref

The 1+Million Genomes Minimal Dataset for Cancer

Nature Genetics
2024-05 | Journal article
DOI: 10.1038/s41588-024-01721-x
Contributors: Michela Riba; Cinzia Sala; Aedin C. Culhane; Åsmund Flobak; Attila Patocs; Kjetil Boye; Karla Plevova; Šárka Pospíšilová; Giorgia Gandolfi; Marco J. Morelli et al.
Source: check_circle
Crossref

The Minimal Dataset for Cancer of the 1+Million Genomes Initiative

2023-10-10 | Preprint
DOI: 10.1101/2023.10.07.561259
Contributors: Michela Riba; Cinzia Sala; Aedin Culhane; Åsmund Flobak; Attila Patocs; Kjetil Boye; Karla Plevova; Šárka Pospíšilová; Giorgia Gandolfi; Marco J Morelli et al.
Source: check_circle
Crossref

A dynamic Boolean model of molecular and cellular interactions represents psoriasis development and predicts drug candidates

2023-09-06 | Preprint
DOI: 10.1101/2023.09.03.556147
Contributors: Eirini Tsirvouli; Vincent Noël; Åsmund Flobak; Laurence Calzone; Martin Kuiper
Source: check_circle
Crossref

Characterisation of Colorectal Cancer Cell Lines through Proteomic Profiling of Their Extracellular Vesicles

Proteomes
2023-01-11 | Journal article
DOI: 10.3390/proteomes11010003
Contributors: Kathleen A. Heck; Håvard T. Lindholm; Barbara Niederdorfer; Eirini Tsirvouli; Martin Kuiper; Åsmund Flobak; Astrid Lægreid; Liv Thommesen
Source: check_circle
Crossref
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Functional precision cancer medicine: drug sensitivity screening enabled by cell culture models

Trends in Pharmacological Sciences
2022-11 | Journal article
DOI: 10.1016/j.tips.2022.08.009
Contributors: Åsmund Flobak; Sigrid S. Skånland; Eivind Hovig; Kjetil Taskén; Hege G. Russnes
Source: check_circle
Crossref

Boolean function metrics can assist modelers to check and choose logical rules.

Journal of theoretical biology
2022-01-24 | Journal article
DOI: 10.1016/j.jtbi.2022.111025
PMID: 35085537
Source: Self-asserted source
Åsmund Flobak

The status of causality in biological databases: data resources and data retrieval possibilities to support logical modeling

Briefings in Bioinformatics
2021-07-20 | Journal article
DOI: 10.1093/bib/bbaa390
Contributors: Vasundra Touré; Åsmund Flobak; Anna Niarakis; Steven Vercruysse; Martin Kuiper
Source: check_circle
Crossref

Logical modeling: Combining manual curation and automated parameterization to predict drug synergies

2021-07-01 | Other
DOI: 10.1101/2021.06.28.450165
Contributors: Åsmund Flobak; John Zobolas; Miguel Vazquez; Tonje S. Steigedal; Liv Thommesen; Asle Grislingås; Barbara Niederdorfer; Evelina Folkesson; Martin Kuiper
Source: check_circle
Crossref

A Middle-Out Modeling Strategy to Extend a Colon Cancer Logical Model Improves Drug Synergy Predictions in Epithelial-Derived Cancer Cell Lines

Frontiers in Molecular Biosciences
2020-10-09 | Journal article
DOI: 10.3389/fmolb.2020.502573
Part of ISSN: 2296-889X
Source: Self-asserted source
Åsmund Flobak

emba: R package for analysis and visualization of biomarkers in boolean model ensembles

Journal of Open Source Software
2020-09-26 | Journal article
DOI: 10.21105/joss.02583
Contributors: John Zobolas; Martin Kuiper; Åsmund Flobak
Source: check_circle
Crossref

Strategies to Enhance Logic Modeling-Based Cell Line-Specific Drug Synergy Prediction.

Frontiers in physiology
2020-07-28 | Journal article
DOI: 10.3389/fphys.2020.00862
PMID: 32848834
PMC: PMC7399174
Source: Self-asserted source
Åsmund Flobak

High-throughput screening reveals higher synergistic effect of MEK inhibitor combinations in colon cancer spheroids.

Scientific reports
2020-07-14 | Journal article
DOI: 10.1038/s41598-020-68441-0
PMID: 32665693
PMC: PMC7360566
Source: Self-asserted source
Åsmund Flobak

The Minimum Information about a Molecular Interaction Causal Statement (MI2CAST)

Bioinformatics
2020-07-08 | Journal article
DOI: 10.1093/bioinformatics/btaa622
Part of ISSN: 1367-4803
Part of ISSN: 1460-2059
Source: Self-asserted source
Åsmund Flobak

Network and Systems Medicine: Position Paper of the European Collaboration on Science and Technology Action on Open Multiscale Systems Medicine.

Network and systems medicine
2020-07-06 | Journal article
DOI: 10.1089/nsm.2020.0004
PMID: 32954378
PMC: PMC7500076
Source: Self-asserted source
Åsmund Flobak

Tumor Targeting by αvβ3-Integrin-Specific Lipid Nanoparticles Occurs via Phagocyte Hitchhiking.

ACS nano
2020-05-15 | Journal article
DOI: 10.1021/acsnano.9b08693
PMID: 32413260
Source: Self-asserted source
Åsmund Flobak

A high-throughput drug combination screen of targeted small molecule inhibitors in cancer cell lines

Scientific Data
2019-10-29 | Journal article
DOI: 10.1038/s41597-019-0255-7
Contributors: Åsmund Flobak; Barbara Niederdorfer; Vu To Nakstad; Liv Thommesen; Geir Klinkenberg; Astrid Lægreid
Source: check_circle
Crossref

Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen.

Nature communications
2019-06-17 | Journal article
DOI: 10.1038/s41467-019-09799-2
PMID: 31209238
PMC: PMC6572829
Source: Self-asserted source
Åsmund Flobak

CImbinator: a web-based tool for drug synergy analysis in small- and large-scale datasets.

Bioinformatics (Oxford, England)
2017-08-01 | Journal article
DOI: 10.1093/bioinformatics/btx161
PMID: 28444126
PMC: PMC5860113
Source: Self-asserted source
Åsmund Flobak

Hvordan lete etter kreftmedisiner som fungerer best sammen?

Tidsskrift for den Norske laegeforening : tidsskrift for praktisk medicin, ny raekke
2016-10-25 | Journal article
DOI: 10.4045/tidsskr.16.0795
PMID: 27790901
Source: Self-asserted source
Åsmund Flobak

Discovery of Drug Synergies in Gastric Cancer Cells Predicted by Logical Modeling.

PLoS computational biology
2015-08-28 | Journal article
DOI: 10.1371/journal.pcbi.1004426
PMID: 26317215
PMC: PMC4567168
Source: Self-asserted source
Åsmund Flobak

The gastrin and cholecystokinin receptors mediated signaling network: a scaffold for data analysis and new hypotheses on regulatory mechanisms.

BMC systems biology
2015-07-24 | Journal article
DOI: 10.1186/s12918-015-0181-z
PMID: 26205660
PMC: PMC4513977
Source: Self-asserted source
Åsmund Flobak

Peer review (4 reviews for 4 publications/grants)

Review activity for eLife (1)
Review activity for Nature biotechnology. (1)
Review activity for Nature communications (1)
Review activity for PLoS computational biology. (1)
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