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University of Cologne: Cologne, DE

Director, Institute of Medical Statistics and Computational Biology (Department of Medicine)
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Achim Tresch

Works (9)

Halfpipe: a tool for analyzing metabolic labeling RNA-seq data to quantify RNA half-lives

NAR Genomics and Bioinformatics
2025-01-07 | Journal article
DOI: 10.1093/nargab/lqaf006
Contributors: Jason M Müller; Elisabeth Altendorfer; Susanne Freier; Katharina Moos; Andreas Mayer; Achim Tresch
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Crossref

Halfpipe: a tool for analyzing metabolic labeling RNA-seq data to quantify RNA half-lives

2024-09-22 | Preprint
DOI: 10.1101/2024.09.19.613510
Contributors: Jason M. Müller; Elisabeth Altendorfer; Susanne Freier; Katharina Moos; Andreas Mayer; Achim Tresch
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Crossref

Nuclear export is a limiting factor in eukaryotic mRNA metabolism

PLOS Computational Biology
2024-05-16 | Journal article
DOI: 10.1371/journal.pcbi.1012059
Contributors: Jason M. Müller; Saurabh Sinha; Katharina Moos; Till Baar; Kerstin C. Maier; Kristina Zumer; Achim Tresch
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Crossref

Dimension Reduction by Spatial Components Analysis Improves Pattern Detection in Multivariate Spatial Data

2023-10-16 | Preprint
DOI: 10.1101/2023.10.12.562016
Contributors: Niklas Kleinenkuhnen; David Köhler; Till Baar; Chrysa Nikopoulou; Vangelis Kondylis; Matthias Schmid; Peter Tessarz; Achim Tresch
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Crossref

Reliable genotyping of recombinant genomes using a robust hidden Markov model

Plant Physiology
2023-05-31 | Journal article
DOI: 10.1093/plphys/kiad191
Contributors: Rafael Campos-Martin; Sophia Schmickler; Manish Goel; Korbinian Schneeberger; Achim Tresch
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Crossref

Nuclear export is a limiting factor in eukaryotic mRNA metabolism

2023-05-04 | Preprint
DOI: 10.1101/2023.05.04.539375
Contributors: Jason M. Müller; Katharina Moos; Till Baar; Kristina Zumer; Achim Tresch
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Crossref

RNA transcription and degradation of Alu retrotransposons depends on sequence features and evolutionary history

G3 Genes|Genomes|Genetics
2022-05-06 | Journal article
DOI: 10.1093/g3journal/jkac054
Contributors: Till Baar; Sebastian Dümcke; Saskia Gressel; Björn Schwalb; Alexander Dilthey; Patrick Cramer; Achim Tresch; L M Steinmetz
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Crossref

Group size planning of breedings of gene-modified animals

2021-09-20 | Other
DOI: 10.1101/2021.09.17.460764
Contributors: Vladislava Milchevskaya; Philippe Bugnon; Emiel B.J. ten Buren; Frank Brand; Achim Tresch; Thorsten Buch
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Crossref

Developmental HCN channelopathy results in decreased neural progenitor proliferation and microcephaly in mice

Proceedings of the National Academy of Sciences
2021-08-31 | Journal article
DOI: 10.1073/pnas.2009393118
Contributors: Anna Katharina Schlusche; Sabine Ulrike Vay; Niklas Kleinenkuhnen; Steffi Sandke; Rafael Campos-Martín; Marta Florio; Wieland Huttner; Achim Tresch; Jochen Roeper; Maria Adele Rueger et al.
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Crossref
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