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Scopus Author ID: 24833148400

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Employment (2)

Uniwersytet Gdanski Wydzial Chemii: Gdansk, PL

2017-05-01 to present
Employment
Source: Self-asserted source
Sergey Samsonov

BIOTEC TU Dresden: Dresden, DE

2006-08 to 2017-02-15
Employment
Source: Self-asserted source
Sergey Samsonov

Education and qualifications (1)

Saint Petersburg State Polytechnical University: Saint Petersburg, RU

2000-09 to 2006-06
Education
Source: Self-asserted source
Sergey Samsonov

Works (39)

Exploring the Impact of Subtle Differences in the Chemical Structure of 1-Alkylsulfates and 1-Alkylsulfonates on Their Interactions with Human Serum Albumin

Molecules
2024-09 | Journal article | Author
DOI: 10.3390/molecules29194598
Contributors: Ola Grabowska; Ankur Singh; Krzysztof Żamojć; Sergey Samsonov; Dariusz Wyrzykowski
Source: check_circle
Multidisciplinary Digital Publishing Institute

Structural Insights into Endostatinā€“Heparan Sulfate Interactions Using Modeling Approaches

Molecules
2024-08 | Journal article | Author
DOI: 10.3390/molecules29174040
Contributors: Urszula Uciechowska-Kaczmarzyk; Martin Frank; Sergey Samsonov; Martyna Maszota-Zieleniak
Source: check_circle
Multidisciplinary Digital Publishing Institute

Why Do Ionic Surfactants Significantly Alter the Chemiluminogenic Properties of Acridinium Salt?

Molecules
2024-08 | Journal article | Author
DOI: 10.3390/molecules29163736
Contributors: Magdalena Mańkowska; Karol Krzymiński; Dariusz Wyrzykowski; Beata Zadykowicz; Sergey Samsonov
Source: check_circle
Multidisciplinary Digital Publishing Institute

Molecular Dynamics-Based Comparative Analysis of Chondroitin and Dermatan Sulfates

Biomolecules
2023-01 | Journal article | Author
DOI: 10.3390/biom13020247
Contributors: Marta Pągielska; Sergey Samsonov
Source: check_circle
Multidisciplinary Digital Publishing Institute

Molecular Dynamics Approaches Dissect Molecular Mechanisms Underlying Methylene Blue–Glycosaminoglycan Interactions

Molecules
2022-04 | Journal article | Author
DOI: 10.3390/molecules27092654
Contributors: Martyna Maszota-Zieleniak; Ferenc Zsila; Sergey Samsonov
Source: check_circle
Multidisciplinary Digital Publishing Institute

Biglycan Interacts with Type I Insulin-like Receptor (IGF-IR) Signaling Pathway to Regulate Osteosarcoma Cell Growth and Response to Chemotherapy

Cancers
2022-02 | Journal article | Author
DOI: 10.3390/cancers14051196
Contributors: Eirini-Maria Giatagana; Aikaterini Berdiaki; Margrethe GaardlĆøs; Sergey Samsonov; George N. Tzanakakis; Dragana Nikitovic
Source: check_circle
Multidisciplinary Digital Publishing Institute

Computational insights into the calcium ions role in protein-glycosaminoglycan systems

Physical Chemistry Chemical Physics
2021 | Journal article
DOI: 10.1039/D0CP05438K
Source: Self-asserted source
Sergey Samsonov

The abnormal accumulation of heparan sulfate in patients with mucopolysaccharidosis prevents the elastolytic activity of cathepsin V

Carbohydrate Polymers
2021 | Journal article
DOI: 10.1016/j.carbpol.2020.117261
Source: Self-asserted source
Sergey Samsonov

Effect of Tetraphenylborate on Physicochemical Properties of Bovine Serum Albumin

Molecules
2021-10 | Journal article | Author
DOI: 10.3390/molecules26216565
Contributors: Ola Grabowska; Małgorzata M. Kogut; Krzysztof Żamojć; Sergey Samsonov; Joanna Makowska; Aleksandra Tesmar; Katarzyna Chmur; Dariusz Wyrzykowski; Lech Chmurzyński
Source: check_circle
Multidisciplinary Digital Publishing Institute

Advanced Molecular Dynamics Approaches to Model a Tertiary Complex APRIL/TACI with Long Glycosaminoglycans

Biomolecules
2021-09 | Journal article | Author
DOI: 10.3390/biom11091349
Contributors: Mateusz Marcisz; Martyna Maszota-Zieleniak; Bertrand Huard; Sergey Samsonov
Source: check_circle
Multidisciplinary Digital Publishing Institute

Theory and Practice of Coarse-Grained Molecular Dynamics of Biologically Important Systems

Biomolecules
2021-09 | Journal article | Author
DOI: 10.3390/biom11091347
Contributors: Adam Liwo; Cezary Czaplewski; Adam Sieradzan; Agnieszka Gabriela Lipska; Sergey Samsonov; RAJESH MURARKA
Source: check_circle
Multidisciplinary Digital Publishing Institute

Coarseā€grained and atomic resolution biomolecular docking with the ATTRACT approach

Proteins-Structure Function and Bioinformatics
2020 | Journal article
DOI: 10.1002/prot.25860
Source: Self-asserted source
Sergey Samsonov

Improved consensus-fragment selection intemplate-assisted prediction of protein structureswith the UNRES force field in CASP13

Journal of Chemical Information and Modeling
2020 | Journal article
DOI: 10.1021/acs.jcim.9b00864
Source: Self-asserted source
Sergey Samsonov

Mind your dye: the amyloid sensor thioflavin T interacts with sulfated glycosaminoglycans used to induce cross-Ī²-sheet motifs

Journal of Physical Chemistry B
2020 | Journal article
DOI: 10.1021/acs.jpcb.0c08273
Source: Self-asserted source
Sergey Samsonov

Probing the proton-loading site of cytochrome c oxidase using time-resolved Fourier transform infrared spectroscopy

Molecules
2020 | Journal article
DOI: 10.3390/molecules25153393
Source: Self-asserted source
Sergey Samsonov
grade
Preferred source (of 2)ā€Ž

Rat cathepsin K: enzymatic specificity and regulation of its collagenolytic activity

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics
2020 | Journal article
DOI: 10.1016/j.bbapap.2019.140318
Source: Self-asserted source
Sergey Samsonov

Role of glycosaminoglycans in procathepsin B maturation: molecular mechanism elucidated by a computational study

Journal of Chemical Information and Modeling
2020 | Journal article
DOI: 10.1021/acs.jcim.0c00023
Source: Self-asserted source
Sergey Samsonov

Role of oligosaccharide chain polarity in protein-glycosaminoglycan interactions

Journal of Chemical Information and Modeling
2020 | Journal article
DOI: 10.1021/acs.jcim.0c01402
Source: Self-asserted source
Sergey Samsonov

Truncation of Huia versabilis Bowman-Birk inhibitor increases its selectivity, matriptase-1 inhibitory activity and proteolytic stability

Biochimie
2020 | Journal article
DOI: 10.1016/j.biochi.2020.03.006
Source: Self-asserted source
Sergey Samsonov

Analysis of procollagen C-proteinase enhancer-1/glycosaminoglycan binding sites and of the potential role of calcium ions in the interaction

International Journal of Molecular Sciences
2019 | Journal article
DOI: 10.3390/ijms20205021
Source: Self-asserted source
Sergey Samsonov

Blind prediction of homoā€ and heteroā€protein complexes: The CASP13ā€CAPRI experiment

Proteins-Structure Function and Bioinformatics
2019 | Journal article
DOI: 10.1002/prot.25838
Source: Self-asserted source
Sergey Samsonov

Case of early-onset Parkinsonā€™s disease in a heterozygous mutation carrier of the ATP7B gene

Journal of Personalized Medicine
2019 | Journal article
DOI: 10.3390/jpm9030041
Source: Self-asserted source
Sergey Samsonov

Cm3+/Eu3+ induced structural, mechanistic and functional implications for calmodulin

Physical Chemistry Chemical Physics
2019 | Journal article
DOI: 10.1039/C9CP03750K
Source: Self-asserted source
Sergey Samsonov

Docking software performance in protein-glycosaminoglycan systems

Journal of Molecular Graphics & Modelling
2019 | Journal article
DOI: 10.1016/j.jmgm.2019.04.001
Source: Self-asserted source
Sergey Samsonov

Evaluation of the scale-consistent UNRES force field in template-free prediction of protein structures in the CASP13 experiment

Journal of Molecular Graphics & Modelling
2019 | Journal article
DOI: 10.1016/j.jmgm.2019.07.013
Source: Self-asserted source
Sergey Samsonov

In silico analysis of heparin and chondroitin sulfate binding mechanisms of the antiprotozoal drug berenil and pentamidine

Carbohydrate Research
2019 | Journal article
DOI: 10.1016/j.carres.2019.107742
Source: Self-asserted source
Sergey Samsonov

Local and long range potentials for heparin-protein systems for coarse-grained simulations

Biopolymers
2019 | Journal article
DOI: 10.1002/bip.23269
Source: Self-asserted source
Sergey Samsonov

Meglumine acridone acetate, the ionic salt of CMA and N-methylglucamine, induces apoptosis in human PBMCs via the mitochondrial pathway

Scientific Reports
2019 | Journal article
DOI: 10.1038/s41598-019-54208-9
Source: Self-asserted source
Sergey Samsonov

Modeling large protein-glycosaminoglycan complexes using a fragmentā€based approach

Journal of Computational Chemistry
2019 | Journal article
DOI: 10.1002/jcc.25797
Source: Self-asserted source
Sergey Samsonov

Molecular dynamics insights into protein-glycosaminoglycan systems from microsecond-scale simulations

Biopolymers
2019 | Journal article
DOI: 10.1002/bip.23252
Source: Self-asserted source
Sergey Samsonov

NMR and molecular modeling reveal specificity of the interactions between CXCL14 and glycosaminoglycans

Glycobiology
2019 | Journal article
DOI: 10.1093/glycob/cwz047
Source: Self-asserted source
Sergey Samsonov

Synthesis and in silico characterization of artificially phosphorylated glycosaminoglycans

Journal of Molecular Structure
2019 | Journal article
DOI: 10.1016/j.molstruc.2019.07.064
Source: Self-asserted source
Sergey Samsonov

The molecular mechanism of structural changes in the antimicrobial peptide CM15 upon complex formation with drug molecule suramin: a computational analysis

Physical Chemistry Chemical Physics
2019 | Journal article
DOI: 10.1039/C9CP00471H
Source: Self-asserted source
Sergey Samsonov

Computational analysis of solvent inclusion in docking studies of protein-glycosaminoglycan systems

Computational drug discovery and design
2018 | Book chapter
DOI: 10.1007/978-1-4939-7756-7_22
Source: Self-asserted source
Sergey Samsonov

Insights into the structure and dynamics of lysyl oxidase propeptide, a flexible protein with numerous partners

Scientific Reports
2018 | Journal article
DOI: 10.1038/s41598-018-30190-6
Source: Self-asserted source
Sergey Samsonov

Molecular dynamics-based model of VEGF-A and its heparin interactions

Journal of Molecular Graphics & Modelling
2018 | Journal article
DOI: 10.1016/j.jmgm.2018.04.015
Source: Self-asserted source
Sergey Samsonov

Molecular interactions of the anticancer agent ellipticine with glycosaminoglycans by in silico analysis

Carbohydrate Research
2018 | Journal article
DOI: 10.1016/j.carres.2018.03.014
Source: Self-asserted source
Sergey Samsonov

Protein-ligand interaction energy-based entropy calculations: fundamental challenges for flexible systems

Journal of Physical Chemistry B
2018 | Journal article
DOI: 10.1021/acs.jpcb.8b03658
Source: Self-asserted source
Sergey Samsonov

The effect of interleukin-8 truncations on its interactions with glycosaminoglycans

Biopolymers
2018 | Journal article
DOI: 10.1002/bip.23103
Source: Self-asserted source
Sergey Samsonov

Peer review (38 reviews for 17 publications/grants)

Review activity for ACS chemical biology. (1)
Review activity for Acta tropica. (1)
Review activity for Biomacromolecules. (1)
Review activity for Biomolecules. (1)
Review activity for Carbohydrate polymers. (1)
Review activity for ChemickeĢ zvesti. (3)
Review activity for ChemistrySelect (1)
Review activity for Computational and Structural Biotechnology Journal (2)
Review activity for Computational biology and chemistry. (1)
Review activity for Heliyon. (2)
Review activity for International journal of molecular sciences. (1)
Review activity for Journal of chemical information and modeling. (14)
Review activity for Journal of chemical theory and computation : (2)
Review activity for Journal of molecular graphics & modelling. (1)
Review activity for Journal of structural biology. (2)
Review activity for Journal of the American Chemical Society. (1)
Review activity for The journal of physical chemistry. (3)
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