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ResearcherID: C-2917-2016
Scopus Author ID: 15838947600

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Russia

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Employment (3)

Institute of Chemical Kinetics and Combustion: Novosibirsk, RU

2003-10 to present | Researcher (Laboratory of Molecular Dynamics and Structures)
Employment
Source: Self-asserted source
Alexey Anikeenko

University of West Bohemia: Pilsen, CZ

2019-01 to 2019-06 (FAV)
Employment
Source: Self-asserted source
Alexey Anikeenko

Novosibirsk State University: Novosibirsk, RU

2015-08 to 2018-12 | Researcher (Laboratory of Structural Bioinformatics and Molecular Modeling)
Employment
Source: Self-asserted source
Alexey Anikeenko

Education and qualifications (2)

Institute of Chemical Kinetics and Combustion: Novosibirsk, RU

2015 | PhD (Chemical Physics)
Education
Source: Self-asserted source
Alexey Anikeenko

Novosibirsk State University: Novosibirsk, RU

2001 to 2003 | Master (Faculty of Physics)
Education
Source: Self-asserted source
Alexey Anikeenko

Works (43)

Amyloidogenicity as a driving force for the formation of functional oligomers.

Journal of structural biology
2020-08-14 | Journal article
DOI: 10.1016/j.jsb.2020.107604
PMID: 32805411
Source: Self-asserted source
Alexey Anikeenko

Exit Regions of Cavities in Proteins

2019 IEEE 19th International Conference on Bioinformatics and Bioengineering (BIBE)
2019-10 | Conference paper
DOI: 10.1109/bibe.2019.00010
ISBN: 9781728146171
Source: Self-asserted source
Alexey Anikeenko

Statistical geometry characterization of local structure of TMAO, TBA and urea aqueous solutions

Journal of Molecular Liquids
2019-07 | Journal article
DOI: 10.1016/j.molliq.2019.04.147
Part of ISSN: 0167-7322
Source: Self-asserted source
Alexey Anikeenko

Establishment of Constraints on Amyloid Formation Imposed by Steric Exclusion of Globular Domains

Journal of Molecular Biology
2018 | Journal article
DOI: 10.1016/j.jmb.2018.05.038
EID:

2-s2.0-85048705937
Contributors: Azizyan, R.A.; Garro, A.; Radkova, Z.; Anikeenko, A.; Bakulina, A.; Dumas, C.; Kajava, A.V.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Structure of Aqueous Solutions of Trimethylaminoxide, Urea, and Their Mixture

Journal of Structural Chemistry
2018 | Journal article
DOI: 10.1134/S0022476618020130
EID:

2-s2.0-85048105565
Contributors: Kadtsyn, E.D.; Anikeenko, A.V.; Medvedev, N.N.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Visualization of the collective vortex-like motions in liquid argon and water: Molecular dynamics simulation

Journal of Chemical Physics
2018 | Journal article
DOI: 10.1063/1.5018140
EID:

2-s2.0-85043465677
Contributors: Anikeenko, A.V.; Malenkov, G.G.; Naberukhin, Y.I.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Large-scale and long-term correlations in collective motions of atoms of liquid argon. Computer simulation

JETP Letters
2017 | Journal article
DOI: 10.1134/S0021364017170064
EID:

2-s2.0-85034454131
Contributors: Anikeenko, A.V.; Naberukhin, Y.I.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Probing Gas Adsorption in Metal-Organic Framework ZIF-8 by EPR of Embedded Nitroxides

Journal of Physical Chemistry C
2017 | Journal article
DOI: 10.1021/acs.jpcc.7b06884
EID:

2-s2.0-85029536713
Contributors: Sheveleva, A.M.; Anikeenko, A.V.; Poryvaev, A.S.; Kuzmina, D.L.; Shundrina, I.K.; Kolokolov, D.I.; Stepanov, A.G.; Fedin, M.V.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Simulation of glycyrrhizic acid associates with cholesterol in methanol

Journal of Structural Chemistry
2017 | Journal article
DOI: 10.1134/S002247661702007X
EID:

2-s2.0-85019653770
Contributors: Anikeenko, A.V.; Zelikman, M.V.; Kadtsyn, E.D.; Medvedev, N.N.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Statistical geometry characterization of global structure of TMAO and TBA aqueous solutions

Journal of Molecular Liquids
2017 | Journal article
DOI: 10.1016/j.molliq.2017.06.001
EID:

2-s2.0-85020390667
Contributors: Anikeenko, A.V.; Kadtsyn, E.D.; Medvedev, N.N.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

TMAO and urea in the hydration shell of the protein SNase

Physical Chemistry Chemical Physics
2017 | Journal article
DOI: 10.1039/c6cp07903b
EID:

2-s2.0-85027007321
Contributors: Smolin, N.; Voloshin, V.P.; Anikeenko, A.V.; Geiger, A.; Winter, R.; Medvedev, N.N.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Visualization of vortex movements in a molecular dynamics model of liquid argon

Doklady Physical Chemistry
2017 | Journal article
DOI: 10.1134/S0012501617010043
EID:

2-s2.0-85017608154
Contributors: Anikeenko, A.V.; Malenkov, G.G.; Naberukhin, Y.I.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Molecular dynamics simulation of a DNA duplex labeled with triarylmethyl spin radicals

Journal of Molecular Liquids
2016 | Journal article
DOI: 10.1016/j.molliq.2016.06.032
EID:

2-s2.0-84975029771
Contributors: Kadtsyn, E.D.; Anikeenko, A.V.; Medvedev, N.N.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Visualization of collective vortex-like motions in a computer model of liquid argon

Journal of Structural Chemistry
2016 | Journal article
DOI: 10.1134/S0022476616080229
EID:

2-s2.0-85010015867
Contributors: Anikeenko, A.V.; Malenkov, G.G.; Naberukhin, Y.I.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Calculation of partial molar volume and its components for molecular dynamics models of dilute solutions

Journal of Structural Chemistry
2013 | Journal article
DOI: 10.1134/S0022476613080088
EID:

2-s2.0-84902507228
Source: Self-asserted source
Alexey Anikeenko
grade
Preferred source (of 2)‎

Molecular dynamics study of ion migration mechanism in rubidium nitrate

Solid State Ionics
2013 | Journal article
DOI: 10.1016/j.ssi.2013.03.010
EID:

2-s2.0-84887125272
Contributors: Anikeenko, A.V.; Medvedev, N.N.; Uvarov, N.F.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Polytetrahedral order and chemical short-range order in metallic melts

Journal of Structural Chemistry
2013 | Journal article
DOI: 10.1134/S002247661302008X
EID:

2-s2.0-84878683506
Contributors: Roik, A.S.; Anikeenko, A.V.; Medvedev, N.N.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

An algorithm for the calculation of volume and surface of unions of spheres. Application for solvation shells

Proceedings - 2011 8th International Symposium on Voronoi Diagrams in Science and Engineering, ISVD 2011
2011 | Conference paper
DOI: 10.1109/ISVD.2011.30
EID:

2-s2.0-80052614487
Contributors: Voloshin, V.P.; Anikeenko, A.V.; Medvedev, N.N.; Geiger, A.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Investigation of the particular features of the structure factor of liquid Al-based alloys

Journal of Molecular Liquids
2011 | Journal article
DOI: 10.1016/j.molliq.2011.04.010
EID:

2-s2.0-79958109209
Contributors: Roik, O.S.; Anikeenko, A.V.; Medvedev, N.N.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Ion transport in salts orientationally disordered in anionic sublattice

Solid State Ionics
2011 | Journal article
DOI: 10.1016/j.ssi.2010.10.014
EID:

2-s2.0-79955021441
Contributors: Uvarov, N.F.; Iskakova, A.A.; Ulihin, A.S.; Medvedev, N.N.; Anikeenko, A.V.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Ionic conductivity in orientationally disordered phases

Russian Journal of Electrochemistry
2011 | Journal article
DOI: 10.1134/S1023193511040197
EID:

2-s2.0-79958103582
Contributors: Uvarov, N.F.; Ulikhin, A.S.; Iskakova, A.A.; Medvedev, N.N.; Anikeenko, A.V.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

On the origin of the high density of liquid cyclohexane

Journal of Structural Chemistry
2011 | Journal article
DOI: 10.1134/S0022476611030073
EID:

2-s2.0-80054772551
Contributors: Anikeenko, A.V.; Medvedev, N.N.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Hydration shells in Voronoi tessellations

ISVD 2010 - 7th International Symposium on Voronoi Diagrams in Science and Engineering
2010 | Conference paper
DOI: 10.1109/ISVD.2010.20
EID:

2-s2.0-77955678054
Contributors: Voloshin, V.P.; Anikeenko, A.V.; Medvedev, N.N.; Geiger, A.; Stoyan, D.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Molecular dynamics simulation of the structure of C6 alkanes

Journal of Structural Chemistry
2010 | Journal article
DOI: 10.1007/s10947-010-0167-z
EID:

2-s2.0-79952686741
Contributors: Anikeenko, A.V.; Kim, A.V.; Medvedev, N.N.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Delaunay simplexes in liquid cyclohexane

6th International Symposium on Voronoi Diagrams in Science and Engineering, ISVD 2009
2009 | Conference paper
DOI: 10.1109/ISVD.2009.10
EID:

2-s2.0-77951435760
Contributors: Anikeenko, A.V.; Kim, A.V.; Medvedev, N.N.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Shapes of delaunay simplexes and structural analysis of hard sphere packings

Studies in Computational Intelligence
2009 | Book
DOI: 10.1007/978-3-540-85126-4_2
EID:

2-s2.0-53349171197
Contributors: Anikeenko, A.V.; Gavrilova, M.L.; Medvedev, N.N.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Simulation of gas diffusion in porous layers of varying structure

Journal of Structural Chemistry
2009 | Journal article
DOI: 10.1007/s10947-009-0061-8
EID:

2-s2.0-70350666722
Contributors: Anikeenko, A.V.; Medvedev, N.N.; Kovalev, M.K.; Melgunov, M.S.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Structure of hard sphere packings near Bernal density

Journal of Structural Chemistry
2009 | Journal article
DOI: 10.1007/s10947-009-0115-y
EID:

2-s2.0-70350679165
Contributors: Anikeenko, A.V.; Medvedev, N.N.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Structural and entropic insights into the nature of the random-close-packing limit

Physical Review E - Statistical, Nonlinear, and Soft Matter Physics
2008 | Journal article
DOI: 10.1103/PhysRevE.77.031101
EID:

2-s2.0-40949084287
Contributors: Anikeenko, A.V.; Medvedev, N.N.; Aste, T.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Observation of fivefold symmetry structures in computer models of dense packing of hard spheres

Journal of Non-Crystalline Solids
2007 | Journal article
DOI: 10.1016/j.jnoncrysol.2007.05.113
EID:

2-s2.0-34548577247
Contributors: Anikeenko, A.V.; Medvedev, N.N.; Bezrukov, A.; Stoyan, D.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Polytetrahedral nature of the dense disordered packings of hard spheres

Physical Review Letters
2007 | Journal article
DOI: 10.1103/PhysRevLett.98.235504
EID:

2-s2.0-34547244057
Contributors: Anikeenko, A.V.; Medvedev, N.N.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Structural characteristics of close packings of hard spheres. Critical densities

Journal of Structural Chemistry
2007 | Journal article
DOI: 10.1007/s10947-007-0118-5
EID:

2-s2.0-35648952706
Contributors: Anikeenko, A.V.; Medvedev, N.N.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

The role of quasi-regular tetrahedra in dense disordered packings of hard spheres

Proceedings - ISVD 2007 The 4th International Symposium on Voronoi Diagrams in Science and Engineering 2007
2007 | Conference paper
DOI: 10.1109/ISVD.2007.36
EID:

2-s2.0-47849117959
Contributors: Anikeenko, A.V.; Medvedev, N.N.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

A novel delaunay simplex technique for the detection of crystalline nuclei in dense packings of spheres

Journal of Ceramic Processing Research
2006 | Journal article
EID:

2-s2.0-33750321198
Contributors: Anikeenko, A.V.; Gavrilova, M.L.; Medvedev, N.N.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Application of procrustes distance to shape analysis of delaunay simplexes

Proceedings - 3rd International Symposium on Voronoi Diagrams in Science and Engineering 2006, ISVD 2006
2006 | Conference paper
DOI: 10.1109/ISVD.2006.10
EID:

2-s2.0-34250329978
Contributors: Anikeenko, A.V.; Medvedev, N.N.; Gavrilova, M.L.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Critical densities in hard sphere packings. Delaunay simplex analysis

Proceedings - 3rd International Symposium on Voronoi Diagrams in Science and Engineering 2006, ISVD 2006
2006 | Conference paper
DOI: 10.1109/ISVD.2006.17
EID:

2-s2.0-34250343425
Contributors: Anikeenko, A.V.; Medvedev, N.N.; Eisner, A.; Lochmann, K.; Stoyan, D.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Homogeneous crystallization of the Lennard-Jones liquid. Structural analysis based on Delaunay simplices method

Journal of Structural Chemistry
2006 | Journal article
DOI: 10.1007/s10947-006-0296-6
EID:

2-s2.0-33750304164
Contributors: Anikeenko, A.V.; Medvedev, N.N.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Spatial correlations of interatomic voids in molecular liquids studied using Delaunay simplices

Journal of Structural Chemistry
2006 | Journal article
DOI: 10.1007/s10947-006-0386-5
EID:

2-s2.0-33846806054
Contributors: Alinchenko, M.G.; Anikeenko, A.V.; Voloshin, V.P.; Medvedev, N.N.; Paschek, D.; Appelhagen, A.; Geiger, A.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Statistical verification of crystallization in hard sphere packings under densification

European Physical Journal B
2006 | Journal article
DOI: 10.1140/epjb/e2006-00348-9
EID:

2-s2.0-33749033609
Contributors: Lochmann, K.; Anikeenko, A.; Elsner, A.; Medvedev, N.; Stoyan, D.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

A novel Delaunay simplex technique for detection of crystalline nuclei in dense packings of spheres

Lecture Notes in Computer Science
2005 | Conference paper
EID:

2-s2.0-24944510484
Contributors: Anikeenko, A.V.; Gavrilova, M.L.; Medvedev, N.N.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

The coloring of the Voronoi network: Investigation of structural heterogeneity in the packings of spheres

Japan Journal of Industrial and Applied Mathematics
2005 | Journal article
DOI: 10.1007/BF03167435
EID:

2-s2.0-22544484798
Contributors: Anikeenko, A.V.; Gavrilova, M.L.; Medvedev, N.N.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Implementation of the Voronoi-Delaunay method for analysis of intermolecular voids

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2004 | Book
EID:

2-s2.0-35048863957
Contributors: Anikeenko, A.V.; Alinchenko, M.G.; Voloshin, V.P.; Medvedev, N.N.; Gavrilova, M.L.; Jedlovszky, P.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier

Morphology of voids in molecular systems. A Voronoi-Delaunay analysis of a simulated DMPC membrane

Journal of Physical Chemistry B
2004 | Journal article
DOI: 10.1021/jp040386q
EID:

2-s2.0-10844241458
Contributors: Alinchenko, M.G.; Anikeenko, A.V.; Medvedev, N.N.; Voloshin, V.P.; Mezei, M.; Jedlovszky, P.
Source: Self-asserted source
Alexey Anikeenko via Scopus - Elsevier
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