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https://www.gkanogiannis.com

Other IDs

SciProfiles: 2475359
Scopus Author ID: 24400720400

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Employment (6)

International Center for Biosaline Agriculture: Dubai, AE

2022-12 to present | Bioinformatics Scientist (Department of Programs)
Employment
Source: Self-asserted source
Anestis Gkanogiannis

Centre for Genomic Regulation: Barcelona, ES

2022-04 to 2022-11 | Bioinformatician (Gene Regulation, Stem Cells and Cancer)
Employment
Source: Self-asserted source
Anestis Gkanogiannis

Alliance of Bioversity International and International Center for Tropical Agriculture: Cali, Valle de Cauca, CO

2017-01 to 2021-06 | Bioinformatics Research Scientist (Crops for Nutrition and Health)
Employment
Source: Self-asserted source
Anestis Gkanogiannis

CIRAD: Montpellier, FR

2015-06 to 2016-12 | PostDoctoral Researcher, Plant Genomics and Bioinformatics
Employment
Source: Self-asserted source
Anestis Gkanogiannis

Genoscope: Paris, FR

2013-06 to 2015-05 | PostDoctoral Researcher, Metagenomics and Bioinformatics
Employment
Source: Self-asserted source
Anestis Gkanogiannis

University of New Brunswick: Fredericton, NB, CA

2011-10 to 2013-03 | PostDoctoral Researcher, Machine Learning (Computer Science)
Employment
Source: Self-asserted source
Anestis Gkanogiannis

Education and qualifications (3)

Athens University of Economics and Business: Athens, GR

2005-09 to 2011-06 | PhD, Machine Learning (Computer Science )
Education
Source: Self-asserted source
Anestis Gkanogiannis

Athens University of Economics and Business: Athens, GR

2003-09 to 2005-06 | MSc (Computer Science )
Education
Source: Self-asserted source
Anestis Gkanogiannis

University of Crete: Heraklion, GR

1998-09 to 2003-06 | BSc (Physics)
Education
Source: Self-asserted source
Anestis Gkanogiannis

Works (30)

Fast and accurate imputation of genotypes from noisy low-coverage sequencing data in bi-parental populations

PLOS ONE
2025-01-30 | Journal article
DOI: 10.1371/journal.pone.0314759
Contributors: Cécile Triay; Andrea Tangherloni; Alice Boizet; Christopher Fragoso; Anestis Gkanogiannis; Jean-François Rami; Mathias Lorieux
Source: check_circle
Crossref

Exploring Proso Millet Resilience to Abiotic Stresses: High-Yield Potential in Desert Environments of the Middle East

Agronomy
2025-01-11 | Journal article
DOI: 10.3390/agronomy15010165
Part of ISSN: 2073-4395
Contributors: Srinivasan Samineni; Sridhar Gummadi; Sumitha Thushar; Dil Nawaz Khan; Anestis Gkanogiannis; Luis Augusto Becerra Lopez-Lavalle; Rakesh Kumar Singh
Source: Self-asserted source
Anestis Gkanogiannis

PRJEB66071

2024 | Dataset
OTHER-ID:

PRJEB66071
Source: check_circle
EMBL-EBI

Chromosome-level genome assembly and functional annotation of Citrullus colocynthis: unlocking genetic resources for drought-resilient crop development

Planta
2024-12 | Journal article
DOI: 10.1007/s00425-024-04551-7
Contributors: Anestis Gkanogiannis; Hifzur Rahman; Rakesh Kumar Singh; Augusto Becerra Lopez-Lavalle
Source: check_circle
Crossref

Nuclear localization of MTHFD2 is required for correct mitosis progression

Nature Communications
2024-11-12 | Journal article
DOI: 10.1038/s41467-024-51847-z
Contributors: Natalia Pardo-Lorente; Anestis Gkanogiannis; Luca Cozzuto; Antoni Gañez Zapater; Lorena Espinar; Ritobrata Ghose; Jacqueline Severino; Laura García-López; Rabia Gül Aydin; Laura Martin et al.
Source: check_circle
Crossref

Mining genomic regions associated with agronomic and biochemical traits in quinoa through GWAS

Scientific Reports
2024-04-22 | Journal article
DOI: 10.1038/s41598-024-59565-8
Contributors: Hifzur Rahman; Prashant Vikram; Yulan Hu; Sugandha Asthana; Abhinav Tanaji; Padmaktshni Suryanarayanan; Chris Quadros; Lovely Mehta; Mohammed Shahid; Anestis Gkanogiannis et al.
Source: check_circle
Crossref

Fast and accurate imputation of genotypes from noisy low-coverage sequencing data in bi-parental populations

2024-03-14 | Preprint
DOI: 10.1101/2024.03.13.584787
Contributors: Triay Cécile; Alice Boizet; Christopher Fragoso; Anestis Gkanogiannis; Jean-Francois Rami; Mathias Lorieux
Source: check_circle
Crossref

Genome Annotation and Other Post-Assembly Workflows for the Tree of Life

2024-02-11 | Preprint
DOI: 10.37044/osf.io/fy49g
Contributors: Tom Brown; Kathleen A. Collier; Fernando Cruz; Anestis Gkanogiannis; Sagane Joye-Dind; Yannis Nevers; Stepan Saenko; Tyler Alioto; Anthony Bretaudeau; Michael Charleston et al.
Source: check_circle
Crossref

Interactions between BRD4S, LOXL2, and MED1 drive cell cycle transcription in triple-negative breast cancer

EMBO Molecular Medicine
2023 | Journal article
DOI: 10.15252/emmm.202318459
EID:

2-s2.0-85176250861

Part of ISSN: 17574684 17574676
Contributors: Pascual-Reguant, L.; Serra-Camprubí, Q.; Datta, D.; Cianferoni, D.; Kourtis, S.; Gañez-Zapater, A.; Cannatá, C.; Espinar, L.; Querol, J.; García-López, L. et al.
Source: Self-asserted source
Anestis Gkanogiannis via Scopus - Elsevier

Integrated genetic and metabolic characterization of Latin American cassava (Manihot esculenta) germplasm

Plant Physiology
2023-08-03 | Journal article | Author
DOI: 10.1093/plphys/kiad269
Part of ISSN: 0032-0889
Part of ISSN: 1532-2548
Contributors: Laura Perez-Fons; Tatiana Maria Ovalle; Margit Drapal; Maria A. Ospina; Anestis Gkanogiannis; Adriana Bohorquez-Chaux; Luis Augusto Becerra Lopez-Lavalle; Paul Fraser
Source: Self-asserted source
Anestis Gkanogiannis
grade
Preferred source (of 3)‎

Nuclear MTHFD2 secures mitosis progression by preserving centromere integrity

2023-06-01 | Preprint | Data curation
DOI: 10.1101/2023.06.01.543193
Contributors: Natalia Pardo Lorente; Anestis Gkanogiannis; Anestis Gkanogiannis; Luca Cozzuto; Antoni Gañez Zapater; Lorena Espinar; Laura García-López; Rabia Gül Aydin; Evangelia Darai; Jacqueline Severino et al.
Source: Self-asserted source
Anestis Gkanogiannis
grade
Preferred source (of 2)‎

Prediction of crossover recombination using parental genomes

PLOS ONE
2023-02-16 | Journal article | Author
DOI: 10.1371/journal.pone.0281804
Part of ISSN: 1932-6203
Contributors: Mauricio Peñuela; Camila Riccio-Rengifo; Jorge Finke; Camilo Rocha; Anestis Gkanogiannis; Rod A. Wing; Mathias Lorieux
Source: Self-asserted source
Anestis Gkanogiannis
grade
Preferred source (of 3)‎

Methylation in the CHH Context Allows to Predict Recombination in Rice

International Journal of Molecular Sciences
2022-10 | Journal article | Author
DOI: 10.3390/ijms232012505
Contributors: Mauricio Peñuela; Jenny Johana Gallo-Franco; Jorge Finke; Camilo Rocha; Anestis Gkanogiannis; Thaura Ghneim Herrera; Mathias Lorieux
Source: check_circle
Multidisciplinary Digital Publishing Institute
grade
Preferred source (of 3)‎

Characterization of cassava ORANGE proteins and their capability to increase provitamin A carotenoids accumulation

PLOS ONE
2022-01-07 | Journal article
DOI: 10.1371/journal.pone.0262412
Part of ISSN: 1932-6203
Contributors: Angélica M. Jaramillo; Santiago Sierra; Paul Chavarriaga-Aguirre; Diana Katherine Castillo-Avila; Anestis Gkanogiannis; Anestis Gkanogiannis; Luis Augusto Becerra López-Lavalle; Juan Pablo Arciniegas; Tianhu Sun; Li Li et al.
Source: Self-asserted source
Anestis Gkanogiannis
grade
Preferred source (of 2)‎

Citrullus_colocynthis.asm-v1

2021 | Dataset
OTHER-ID:

GCA_963978565.1
Source: check_circle
EMBL-EBI

SAMEA114392512

2021 | Dataset
OTHER-ID:

SAMEA114392512
Source: check_circle
EMBL-EBI

NOISYmputer: genotype imputation in bi-parental populations for noisy low-coverage next-generation sequencing data

bioRxiv 658237
2019 | Conference paper
DOI: 10.1101/658237
Source: Self-asserted source
Anestis Gkanogiannis
grade
Preferred source (of 2)‎

Capturing next-generation genome wide molecular markers in cassava helps to untangle the crop's genetic improvement history

Proceedings Plant and Animal Genome XXVI Conference, 2018 PAG, San Diego
2018 | Conference paper
URI:

https://pag.confex.com/pag/xxvi/meetingapp.cgi/Paper/28751
Source: Self-asserted source
Anestis Gkanogiannis

Population structure of wild and cultivated plants shows hierarchical organization of cassava germplasm diversity

Proceedings Plant and Animal Genome XXVI Conference, 2018 PAG, San Diego
2018 | Conference paper
URI:

https://pag.confex.com/pag/xxvi/meetingapp.cgi/Paper/29594
Source: Self-asserted source
Anestis Gkanogiannis

The cassava genome hub

Proceedings Plant and Animal Genome XXVI Conference, 2018 PAG, San Diego
2018 | Conference paper
URI:

https://pag.confex.com/pag/xxvi/meetingapp.cgi/Paper/31128
Source: Self-asserted source
Anestis Gkanogiannis

A scalable assembly-free variable selection algorithm for biomarker discovery from metagenomes

BMC Bioinformatics
2016 | Journal article
DOI: 10.1186/s12859-016-1186-3
Source: Self-asserted source
Anestis Gkanogiannis
grade
Preferred source (of 2)‎

The South Green portal: a comprehensive resource for tropical and Mediterranean crop genomics

Current Plant Biology
2016 | Journal article
DOI: 10.1016/j.cpb.2016.12.002
Source: Self-asserted source
Anestis Gkanogiannis

A Perceptron-Like Linear Supervised Algorithm for Text Classification

Advanced Data Mining and Applications (ADMA), Lecture Notes in Computer Science, 2010, Volume 6440/2010, 86-97, Chongqing, China
2010 | Conference paper
DOI: 10.1007/978-3-642-17316-5_8
Source: Self-asserted source
Anestis Gkanogiannis
grade
Preferred source (of 2)‎

IPL at ImageCLEF 2010

CEUR Workshop Proceedings
2010 | Conference paper
EID:

2-s2.0-84922022305

Part of ISSN: 16130073
Contributors: Stougiannis, A.; Gkanogiannis, A.; Kalamboukis, T.
Source: Self-asserted source
Anestis Gkanogiannis via Scopus - Elsevier

IPL at ImageCLEF 2010

2010 | Conference paper
URI:

http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.174.3029
Source: Self-asserted source
Anestis Gkanogiannis

A modified and fast Perceptron learning rule and its use for Tag Recommendations in Social Bookmarking Systems

CEUR Workshop Proceedings
2009 | Conference paper
EID:

2-s2.0-84887461953

Part of ISSN: 16130073
Contributors: Gkanogiannis, A.; Kalamboukis, T.
Source: Self-asserted source
Anestis Gkanogiannis via Scopus - Elsevier

A modified and fast Perceptron learning rule and its use for Tag Recommendations in Social Bookmarking Systems

ECML PKDD Discovery Challenge 2009 (DC09), International Workshop at the ECML/PKDD in Bled, Slovenia, September 7th, 2009
2009 | Conference paper
URI:

https://dl.acm.org/doi/10.5555/3056147.3056153
Source: Self-asserted source
Anestis Gkanogiannis

A Greek-English Cross Language Medical Information Retrieval System

Conference on Medical Imaging and Informatics, MIMI 2007, Beijing
2008 | Conference paper
DOI: 10.1007/978-3-540-79490-5_15
Source: Self-asserted source
Anestis Gkanogiannis
grade
Preferred source (of 2)‎

A novel supervised learning algorithm and its use for Spam Detection in Social Bookmarking Systems

Winner of ECML PKDD Discovery Challenge 2008 (DC08), task 1: Spam Detection in Social Bookmarking Systems, Adwerp, Belgium, 2008
2008 | Conference paper
Source: Self-asserted source
Anestis Gkanogiannis

An Algorithm for Text Categorization

The 31st Annual International ACM SIGIR Conference, 20-24 July, Singapore
2008 | Conference paper
DOI: 10.1145/1390334.1390547
Source: Self-asserted source
Anestis Gkanogiannis
grade
Preferred source (of 2)‎
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