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Capturing cell type-specific chromatin compartment patterns by applying topic modeling to single-cell Hi-C data

PLOS Computational Biology
2020-09-18 | Journal article
DOI: 10.1371/journal.pcbi.1008173
Contributors: Hyeon-Jin Kim; Ilya Ioshikhes; Galip Gürkan Yardımcı; Giancarlo Bonora; Vijay Ramani; Jie Liu; Ruolan Qiu; Choli Lee; Jennifer Hesson; Carol B. Ware et al.
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Epigenetic memory via concordant DNA methylation is inversely correlated to developmental potential of mammalian cells

PLOS Genetics
2017-11-06 | Journal article
DOI: 10.1371/journal.pgen.1007060
Contributors: Minseung Choi; Gregory S. Barsh; Diane P. Genereux; Jamie Goodson; Haneen Al-Azzawi; Shannon Q. Allain; Noah Simon; Stan Palasek; Carol B. Ware; Chris Cavanaugh et al.
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