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Employment (4)

MONASH UNIVERSITY: Clayton, AU

Employment
Source: check_circle
Monash University

Monash University: Clayton, Vic, AU

2021-01-01 to present | Senior Research Fellow (Monash Biomedicine Discovery Institute)
Employment
Source: Self-asserted source
Juan Nunez-Iglesias

Victorian Life Sciences Computation Initiative: Carlton, VIC, AU

2012 to present | Research Scientist (Life Sciences Computation Centre)
Employment
Source: Self-asserted source
Juan Nunez-Iglesias

Howard Hughes Medical Institute Janelia Farm Research Campus: Ashburn, VA, US

2009 to 2012 | Research Associate
Employment
Source: Self-asserted source
Juan Nunez-Iglesias

Education and qualifications (4)

University of Southern California: Los Angeles, CA, US

2008-08-25 to 2009-09-15 | MS (Statistics) (Mathematics)
Education
Source: Self-asserted source
Juan Nunez-Iglesias

University of Southern California: Los Angeles, CA, US

2003-08 to 2009-09 | PhD (Computational Biology and Bioinformatics) (Biology)
Education
Source: Self-asserted source
Juan Nunez-Iglesias

University of Melbourne: Melbourne, VIC, AU

2002-02-01 to 2002-12-01 | BSc (Hons) (Biochemistry)
Education
Source: Self-asserted source
Juan Nunez-Iglesias

University of Melbourne: Melbourne, VIC, AU

1999-07-30 to 2001-12-01 | BBiomedSci
Education
Source: Self-asserted source
Juan Nunez-Iglesias

Works (31)

A novel method for radial hydride analysis in zirconium alloys: HAPPy

Journal of Nuclear Materials
2022 | Journal article
EID:

2-s2.0-85120937238

Part of ISSN: 00223115
Contributors: Maric, M.; Thomas, R.; Nunez-Iglesias, J.; Atkinson, M.; Bertsch, J.; Frankel, P.; Race, C.; Barberis, P.; Bourlier, F.; Preuss, M. et al.
Source: Self-asserted source
Juan Nunez-Iglesias via Scopus - Elsevier

Metabolic sensing in AgRP neurons integrates homeostatic state with dopamine signalling in the striatum

eLife
2022 | Journal article
EID:

2-s2.0-85123618913

Part of ISSN: 2050084X
Contributors: Reichenbach, A.; Clarke, R.E.; Stark, R.; Lockie, S.H.; Mequinion, M.; Dempsey, H.; Rawlinson, S.; Reed, F.; Sepehrizadeh, T.; Deveer, M. et al.
Source: Self-asserted source
Juan Nunez-Iglesias via Scopus - Elsevier

Multimodal imaging reveals membrane skeleton reorganisation during reticulocyte maturation and differences in dimple and rim regions of mature erythrocytes

Journal of Structural Biology: X
2022 | Journal article
EID:

2-s2.0-85121274168

Part of ISSN: 25901524
Contributors: Blanch, A.J.; Nunez-Iglesias, J.; Namvar, A.; Menant, S.; Looker, O.; Rajagopal, V.; Tham, W.-H.; Tilley, L.; Dixon, M.W.A.
Source: Self-asserted source
Juan Nunez-Iglesias via Scopus - Elsevier

Glucose-sensing in AgRP neurons integrates homeostatic energy state with dopamine signalling in the striatum

bioRxiv
2021 | Other
EID:

2-s2.0-85113710781

Part of ISSN: 26928205
Contributors: Reichenbach, A.; Clarke, R.E.; Stark, R.; Lockie, S.H.; Mequinion, M.; Reed, F.; Rawlinson, S.; Dempsey, H.; Sepehrizadeh, T.; DeVeer, M. et al.
Source: Self-asserted source
Juan Nunez-Iglesias via Scopus - Elsevier

Identification of a stress-sensitive anorexigenic neurocircuit from medial prefrontal cortex to lateral hypothalamus in humans and mice

bioRxiv
2021 | Other
EID:

2-s2.0-85117939141

Part of ISSN: 26928205
Contributors: Clarke, R.E.; Voigt, K.; Stark, R.; Bharania, U.; Dempsey, H.; Reichenbach, A.; Lockie, S.H.; Mequinion, M.; Reed, F.; Rawlinson, S. et al.
Source: Self-asserted source
Juan Nunez-Iglesias via Scopus - Elsevier

SciPy 1.0: fundamental algorithms for scientific computing in Python

Nature Methods
2020 | Journal article
EID:

2-s2.0-85079119586

Part of ISSN: 15487105 15487091
Contributors: Virtanen, P.; Gommers, R.; Oliphant, T.E.; Haberland, M.; Reddy, T.; Cournapeau, D.; Burovski, E.; Peterson, P.; Weckesser, W.; Bright, J. et al.
Source: Self-asserted source
Juan Nunez-Iglesias via Scopus - Elsevier

Interactive design of GPU-accelerated Image Data Flow Graphs and cross-platform deployment using multi-lingual code generation

2020-11-20 | Preprint
Contributors: Robert Haase; Akanksha Jain; Stéphane Rigaud; Daniela Vorkel; Pradeep Rajasekhar; Theresa Suckert; Talley J. Lambert; Juan Nunez-Iglesias; Daniel P. Poole; Pavel Tomancak et al.
Source: check_circle
Crossref

The knob protein KAHRP assembles into a ring-shaped structure that underpins virulence complex assembly

PLOS Pathogens
2019-05-09 | Journal article
Contributors: Oliver Looker; Michael J. Blackman; Adam J. Blanch; Boyin Liu; Juan Nunez-Iglesias; Paul J. McMillan; Leann Tilley; Matthew W. A. Dixon
Source: check_circle
Crossref

Synaptic cleft segmentation in non-isotropic volume electron microscopy of the complete drosophila brain

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2018 | Book
EID:

2-s2.0-85054065238

Part of ISSN: 16113349 03029743
EID:

2-s2.0-85093180840

Part of ISSN: 23318422
Contributors: Heinrich, L.; Funke, J.; Pape, C.; Nunez-Iglesias, J.; Saalfeld, S.
Source: Self-asserted source
Juan Nunez-Iglesias
grade
Preferred source (of 2)‎

A new Python library to analyse skeleton images confirms malaria parasite remodelling of the red blood cell membrane skeleton

PeerJ
2018-02-15 | Journal article | Author
SOURCE-WORK-ID:

d2692082-aea1-4601-8296-b40c0dad48e3

EID:

2-s2.0-85042131851

WOSUID:

000425362200003

Contributors: Juan Nunez-Iglesias; Adam J. Blanch; Oliver Looker; Matthew W. Dixon; Leann Tilley
Source: check_circle
Monash University

Aurora Kinase B, a novel regulator of TERF1 binding and telomeric integrity

Nucleic Acids Research
2017-12-01 | Journal article | Author
SOURCE-WORK-ID:

025129ee-e869-4bc7-bb90-26a10aaa8ab3

EID:

2-s2.0-85039035948

Contributors: Foong Lyn Chan; Benjamin Vinod; Karel Novy; Ralf Schittenhelm; Cheng Huang; Maheshi Udugama; Juan Nunez-Iglesias; Jane I. Lin; Linda Hii; Julie Chan et al.
Source: check_circle
Monash University
grade
Preferred source (of 2)‎

Elegant SciPy

2017-08 | Book | Author
SOURCE-WORK-ID:

216b74ba-4c79-4e7b-a3f7-5355540fc2a0

Contributors: Juan Nunez-Iglesias; Stéfan Van Der Walt; Harriet Dashnow
Source: check_circle
Monash University

Analyzing microtomography data with Python and the scikit-image library

Advanced Structural and Chemical Imaging
2016-12-07 | Journal article | Author
SOURCE-WORK-ID:

31e344a0-1d26-4db2-bc8e-392b521d5eab

WOSUID:

000411092600001

Contributors: Emmanuelle Gouillart; Juan Nunez-Iglesias; Stéfan Van Der Walt
Source: check_circle
Monash University

Synaptic circuits and their variations within different columns in the visual system of Drosophila

Proceedings of the National Academy of Sciences of the United States of America
2015-11-03 | Journal article | Author
SOURCE-WORK-ID:

c9d98061-3384-47b2-954a-7c8c0faf0fa4

EID:

2-s2.0-84946600443

WOSUID:

000364164900080

Contributors: Shin Ya Takemura; C. Shan Xu; Zhiyuan Lu; Patricia K. Rivlin; Toufiq Parag; Donald J. Olbris; Stephen Plaza; Ting Zhao; William T. Katz; Lowell Umayam et al.
Source: check_circle
Monash University

Graph-based Active Learning of Agglomeration (GALA)

Frontiers in Neuroinformatics
2014-04-04 | Journal article | Author
SOURCE-WORK-ID:

5d683df1-6ffa-48dc-a956-60cf9fcf00e0

EID:

2-s2.0-84897944856

WOSUID:

000348107700001

Contributors: Juan Nunez-Iglesias; Ryan Kennedy; Stephen M. Plaza; Anirban Chakraborty; William T. Katz
Source: check_circle
Monash University

Scikit-image

PeerJ
2014-01-01 | Journal article | Author
SOURCE-WORK-ID:

a14e57c2-8990-45fb-ba50-7f99f7bbe27d

EID:

2-s2.0-84903840343

WOSUID:

000347610600005

Contributors: Stéfan Van Der Walt; Johannes L. Schönberger; Juan Nunez-Iglesias; François Boulogne; Joshua D. Warner; Neil Yager; Emmanuelle Gouillart; Tony Yu
Source: check_circle
Monash University

Electron Microscopy Reconstruction of Brain Structure Using Sparse Representations over Learned Dictionaries.

2013-08 | Journal article
DOI:

10.1109/TMI.2013.2276018

PMID:

23925366

Contributors: Hu T; Nunez-Iglesias J; Vitaladevuni S; Scheffer L; Xu S; Bolorizadeh M; Hess H; Fetter R; Chklovskii D
Source: Self-asserted source
Juan Nunez-Iglesias via Europe PubMed Central

Machine learning of hierarchical clustering to segment 2D and 3D images.

2013 | Journal article
DOI:

10.1371/journal.pone.0071715

PMID:

23977123

PMC:

PMC3748125

Contributors: Nunez-Iglesias J; Kennedy R; Parag T; Shi J; Chklovskii DB
Source: Self-asserted source
Juan Nunez-Iglesias via Europe PubMed Central

Frequent Pattern Discovery in Multiple Biological Networks: Patterns and Algorithms

Statistics in Biosciences
2012 | Journal article
EID:

2-s2.0-84860451941

Part of ISSN: 18671764 18671772
Contributors: Li, W.; Hu, H.; Huang, Y.; Li, H.; Mehan, M.R.; Nunez-Iglesias, J.; Xu, M.; Yan, X.; Zhou, X.J.
Source: Self-asserted source
Juan Nunez-Iglesias via Scopus - Elsevier

Pattern mining across many massive biological networks

Functional Coherence of Molecular Networks in Bioinformatics
2012-07-01 | Book chapter | Author
SOURCE-WORK-ID:

e5e9c9a1-7a6c-48c3-ae73-5930c9956dd1

EID:

2-s2.0-84949178224

Part of ISBN: 9781461403203
Part of ISBN: 1461403197
Part of ISBN: 9781461403197
Contributors: Wenyuan Li; Haiyan Hu; Yu Huang; Haifeng Li; Michael R. Mehan; Juan Nunez-Iglesias; Min Xu; Xifeng Yan; Xianghong Jasmine Zhou
Source: check_circle
Monash University

Betamax: towards optimal sampling strategies for high-throughput screens.

2012-06 | Journal article
DOI:

10.1089/cmb.2012.0036

PMID:

22697247

Contributors: Grover D; Nunez-Iglesias J
Source: Self-asserted source
Juan Nunez-Iglesias via Europe PubMed Central

High resolution segmentation of neuronal tissues from low depth-resolution em imagery

Energy Minimazation Methods in Computer Vision and Pattern Recognition - 8th International Conference, EMMCVPR 2011, Proceedings
2011-08-22 | Conference paper | Author
SOURCE-WORK-ID:

0f095eeb-40c2-47d5-9242-337dbcc0d98a

EID:

2-s2.0-80051769353

Part of ISBN: 9783642230936
Contributors: Daniel Glasner; Tao Hu; Juan Nunez-Iglesias; Lou Scheffer; Shan Xu; Harald Hess; Richard Fetter; Dmitri Chklovskii; Ronen Basri
Source: check_circle
Monash University

An integrative modular approach to systematically predict gene-phenotype associations.

2010 | Journal article
DOI:

10.1186/1471-2105-11-S1-S62

PMID:

20122238

PMC:

PMC3009536

Contributors: Mehan MR; Nunez-Iglesias J; Dai C; Waterman MS; Zhou XJ
Source: Self-asserted source
Juan Nunez-Iglesias via Europe PubMed Central

Joint genome-wide profiling of miRNA and mRNA expression in Alzheimer's disease cortex reveals altered miRNA regulation.

2010 | Journal article
DOI:

10.1371/journal.pone.0008898

PMID:

20126538

PMC:

PMC2813862

Contributors: Nunez-Iglesias J; Liu CC; Morgan TE; Finch CE; Zhou XJ
Source: Self-asserted source
Juan Nunez-Iglesias via Europe PubMed Central

An integrative network approach to map the transcriptome to the phenome.

2009-08 | Journal article
DOI:

10.1089/cmb.2009.0037

PMID:

19630539

PMC:

PMC3154457

Contributors: Mehan MR; Nunez-Iglesias J; Kalakrishnan M; Waterman MS; Zhou XJ
Source: Self-asserted source
Juan Nunez-Iglesias via Europe PubMed Central
grade
Preferred source (of 2)‎

Usefulness and limitations of dK random graph models to predict interactions and functional homogeneity in biological networks under a pseudo-likelihood parameter estimation approach.

2009 | Journal article
DOI:

10.1186/1471-2105-10-277

PMID:

19728875

PMC:

PMC2755484

Contributors: Wang W; Nunez-Iglesias J; Luan Y; Sun F
Source: Self-asserted source
Juan Nunez-Iglesias via Europe PubMed Central

An integrative approach to characterize disease-specific pathways and their coordination: a case study in cancer.

2008 | Journal article
DOI:

10.1186/1471-2164-9-S1-S12

PMID:

18366601

PMC:

PMC2386054

Contributors: Xu M; Kao MC; Nunez-Iglesias J; Nevins JR; West M; Zhou XJ
Source: Self-asserted source
Juan Nunez-Iglesias via Europe PubMed Central

Gene Aging Nexus: a web database and data mining platform for microarray data on aging.

2007-01 | Journal article
DOI:

10.1093/nar/gkl798

PMID:

17090592

PMC:

PMC1669755

Contributors: Pan F; Chiu CH; Pulapura S; Mehan MR; Nunez-Iglesias J; Zhang K; Kamath K; Waterman MS; Finch CE; Zhou XJ
Source: Self-asserted source
Juan Nunez-Iglesias via Europe PubMed Central

Integrative Array Analyzer: a software package for analysis of cross-platform and cross-species microarray data.

2006-07 | Journal article
DOI:

10.1093/bioinformatics/btl163

PMID:

16672260

Contributors: Pan F; Kamath K; Zhang K; Pulapura S; Achar A; Nunez-Iglesias J; Huang Y; Yan X; Han J; Hu H et al.
Source: Self-asserted source
Juan Nunez-Iglesias via Europe PubMed Central

Recruitment of the adaptor protein 2 complex by the human immunodeficiency virus type 2 envelope protein is necessary for high levels of virus release.

2006-03 | Journal article
DOI:

10.1128/JVI.80.6.2924-2932.2006

PMID:

16501101

PMC:

PMC1395462

Contributors: Noble B; Abada P; Nunez-Iglesias J; Cannon PM
Source: Self-asserted source
Juan Nunez-Iglesias via Europe PubMed Central

Functional annotation and network reconstruction through cross-platform integration of microarray data.

2005-02 | Journal article
DOI:

10.1038/nbt1058

PMID:

15654329

Contributors: Zhou XJ; Kao MC; Huang H; Wong A; Nunez-Iglesias J; Primig M; Aparicio OM; Finch CE; Morgan TE; Wong WH
Source: Self-asserted source
Juan Nunez-Iglesias via Europe PubMed Central