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Imperial College London
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Works (14)

Monitoring SARS-CoV-2 variants with complementary surveillance systems: risk evaluation of the Omicron JN.1 variant in France, August 2023 to January 2024

Eurosurveillance
2025-01-09 | Journal article
DOI: 10.2807/1560-7917.ES.2025.30.1.2400293
Contributors: Adriana Traore; Kelly Charniga; Sophie Grellet; Garance Terpant; Héléna Da Cruz; Anais Lamy; Nathalie Thomas; Gwladys Gbaguidi; Alizé Mercier; Julie Prudhomme et al.
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Best practices for estimating and reporting epidemiological delay distributions of infectious diseases

PLOS Computational Biology
2024-10-28 | Journal article
DOI: 10.1371/journal.pcbi.1012520
Contributors: Kelly Charniga; Samuel V. Scarpino; Sang Woo Park; Andrei R. Akhmetzhanov; Anne Cori; Jonathan Dushoff; Sebastian Funk; Katelyn M. Gostic; Natalie M. Linton; Adrian Lison et al.
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Lassa fever outbreaks, mathematical models, and disease parameters: a systematic review and meta-analysis

2024-03-24 | Preprint
DOI: 10.1101/2024.03.23.24304596
Contributors: Patrick Doohan; David Jorgensen; Tristan M. Naidoo; Kelly McCain; Joseph T. Hicks; Ruth McCabe; Sangeeta Bhatia; Kelly Charniga; Gina Cuomo-Dannenburg; Arran Hamlet et al.
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Marburg Virus Disease outbreaks, mathematical models, and disease parameters: a Systematic Review

2023-07-12 | Preprint
DOI: 10.1101/2023.07.10.23292424
Contributors: Gina Cuomo-Dannenburg; Kelly McCain; Ruth McCabe; H. Juliette T. Unwin; Patrick Doohan; Rebecca K. Nash; Joseph T. Hicks; Kelly Charniga; Cyril Geismar; Ben Lambert et al.
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Nowcasting and Forecasting the 2022 U.S. Mpox Outbreak: Support for Public Health Decision Making and Lessons Learned

2023-04-17 | Preprint
DOI: 10.1101/2023.04.14.23288570
Contributors: Kelly Charniga; Zachary J. Madewell; Nina B. Masters; Jason Asher; Yoshinori Nakazawa; Ian H. Spicknall
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Updating reproduction number estimates for mpox in the Democratic Republic of Congo using surveillance data

2023-04-17 | Preprint
DOI: 10.1101/2023.04.14.23288572
Contributors: Kelly Charniga; Andrea M. McCollum; Christine M. Hughes; Benjamin Monroe; Joelle Kabamba; Robert Shongo Lushima; Toutou Likafi; Beatrice Nguete; Elisabeth Pukuta; Elisabeth Muyamuna et al.
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Estimating Zika virus attack rates and risk of Zika virus-associated neurological complications in Colombian capital cities with a Bayesian model

Royal Society Open Science
2022-11 | Journal article
DOI: 10.1098/rsos.220491
Contributors: Kelly Charniga; Zulma M. Cucunubá; Diana M. Walteros; Marcela Mercado; Franklyn Prieto; Martha Ospina; Pierre Nouvellet; Christl A. Donnelly
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Serial interval and incubation period estimates of monkeypox virus infection in 12 U.S. jurisdictions, May – August 2022

2022-10-30 | Preprint
DOI: 10.1101/2022.10.26.22281516
Contributors: Zachary J. Madewell; Kelly Charniga; Nina B. Masters; Jason Asher; Lily Fahrenwald; William Still; Judy Chen; Naama Kipperman; David Bui; Meghan Shea et al.
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Estimating the incubation period of monkeypox virus during the 2022 multi-national outbreak

2022-06-23 | Preprint
DOI: 10.1101/2022.06.22.22276713
Contributors: Kelly Charniga; Nina B. Masters; Rachel B. Slayton; Lucas Gosdin; Faisal S. Minhaj; David Philpott; Dallas Smith; Shannon Gearhart; Francisco Alvarado-Ramy; Clive Brown et al.
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Spatial and temporal invasion dynamics of the 2014–2017 Zika and chikungunya epidemics in Colombia

PLOS Computational Biology
2021-07-02 | Journal article
DOI: 10.1371/journal.pcbi.1009174
Contributors: Kelly Charniga; Sebastian Funk; Zulma M. Cucunubá; Marcela Mercado; Franklyn Prieto; Martha Ospina; Pierre Nouvellet; Christl A. Donnelly
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Descriptive analysis of surveillance data for Zika virus disease and Zika virus-associated neurological complications in Colombia, 2015–2017

PLOS ONE
2021-06-16 | Journal article
DOI: 10.1371/journal.pone.0252236
Contributors: Kelly Charniga; Berlin Londono; Zulma M. Cucunubá; Diana M. Walteros; Marcela Mercado; Franklyn Prieto; Martha Ospina; Pierre Nouvellet; Christl A. Donnelly
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The epidemiology of Mayaro virus in the Americas: A systematic review and key parameter estimates for outbreak modelling

PLOS Neglected Tropical Diseases
2021-06-03 | Journal article
DOI: 10.1371/journal.pntd.0009418
Contributors: Edgar-Yaset Caicedo; Eugenia Corrales-Aguilar; Kelly Charniga; Amanecer Rueda; Ilaria Dorigatti; Yardany Mendez; Arran Hamlet; Jean-Paul Carrera; Zulma M. Cucunubá
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The epidemiology of Mayaro virus in the Americas: A systematic review and key parameter estimates for outbreak modelling

2020-12-11 | Other
DOI: 10.1101/2020.12.10.20247296
Contributors: Edgar-Yaset Caicedo; Kelly Charniga; Amanecer Rueda; Ilaria Dorigatti; Yardany Mendez; Arran Hamlet; Jean-Paul Carrera; Zulma M. Cucunubá
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Crossref

Spatial and temporal invasion dynamics of the 2014-2017 Zika and chikungunya epidemics in Colombia

2020-09-13 | Other
DOI: 10.1101/2020.09.11.20189811
Contributors: Kelly Charniga; Zulma M. Cucunubá; Marcela Mercado; Franklyn Prieto; Martha Ospina; Pierre Nouvellet; Christl A. Donnelly
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Crossref

Peer review (1 review for 1 publication/grant)

Review activity for PLoS computational biology. (1)
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