Personal information

Websites & social links

DICE Team webpage
My Github profile
My GitLab profile

Other IDs

Scopus Author ID: 24474623200

Keywords

HPC, DHT, VHT, RoR

Countries

Poland

Biography

Marek Kasztelnik is a senior software engineer with over 20 years of experience creating healthcare, earning warnings, telecommunication information systems and running scientific applications on distributed HPC resources and cloud infrastructures. Marek participated in numerous research projects (national and EU-funded), such as EDITH (architect and leading developer of the simulation platform demonstrator), Primage, EurValve, VPH Share and ViroLab. Creator of the Model Execution Environment – a patient-oriented simulation pipelining system integrated with the Ares, Athena, and Prometheus HPC supercomputers hosted at Cyfronet. Architect and the leading developer of the EOSC marketplace. Architect and the technical team lead of the PLGrid portal. He authorises 50+ scientific articles and presentations in e-science, personalised medicine, and HPC. Open source contributor to popular OSS projects (e.g. Ruby on Rails, Gitlab, WebMock, JCloud).

Activities

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Employment (5)

Akademickie Centrum Komputerowe Cyfronet AGH: Krakow, PL

2005-04-01 to present | Principal Software Engineer, Researcher (Laboratory of Information Methods in Medicine)
Employment
Source: Self-asserted source
Marek Kasztelnik

Wyższa Szkoła Zarządzania i Bankowości w Krakowie: Krakow, PL

2010-10-01 to 2021-03-01 | Teacher (Informatics)
Employment
Source: Self-asserted source
Marek Kasztelnik

Jagiellonian University: Krakow, PL

2011-06-01 to 2016-06-30 | Subcontractor, creator of the PhD students reporting system (Institute of Sociology)
Employment
Source: Self-asserted source
Marek Kasztelnik

Spectrum IT: Kraków, Małopolska, PL

2012-03-01 to 2012-09-30 | Software Engineer (IT Division)
Employment
Source: Self-asserted source
Marek Kasztelnik

Comarch (Poland): Krakow, PL

2005-04-01 to 2011-09-30 | Senior Developer (IT solutions for Telecommunication)
Employment
Source: Self-asserted source
Marek Kasztelnik

Education and qualifications (1)

AGH University of Krakow: Krakow, PL

2001 to 2005 | Master or Science (Faculty of Electrical Engineering, Automatics, Computer Science and Electronics)
Education
Source: Self-asserted source
Marek Kasztelnik

Funding (11)

My Personal AI Mediator for Virtual MEETtings BetWEEN People

2024-01-01 to 2027-12-31 | Grant
European Commission (Brussels, BE)
URL: https://app.dimensions.ai/details/grant/grant.13733886
GRANT_NUMBER: 101135798
Source: Self-asserted source
Marek Kasztelnik via DimensionsWizard

Towards GEMINI: A Generation of Multi-scale Digital Twins of Ischaemic and Haemorrhagic Stroke Patients

2023-12-01 to 2029-11-30 | Grant
European Commission (Brussels, BE)
URL: https://app.dimensions.ai/details/grant/grant.13862598
GRANT_NUMBER: 101136438
Source: Self-asserted source
Marek Kasztelnik via DimensionsWizard

An ecosystem for digital twins in healthcare

2022-10-01 to 2024-09-30 | Grant
European Commission (Brussels, BE)
URL: https://app.dimensions.ai/details/grant/grant.13712399
GRANT_NUMBER: 101083771
Source: Self-asserted source
Marek Kasztelnik via DimensionsWizard

PRedictive In-silico Multiscale Analytics to support cancer personalized diaGnosis and prognosis, Empowered by imaging biomarkers

2018-12-01 to 2023-05-31 | Grant
European Commission (Brussels, BE)
URL: https://app.dimensions.ai/details/grant/grant.7879506
GRANT_NUMBER: 826494
Source: Self-asserted source
Marek Kasztelnik via DimensionsWizard

Personalised Decision Support for Heart Valve Disease

2016-02-01 to 2019-01-31 | Grant
European Commission (Brussels, BE)
URL: https://app.dimensions.ai/details/grant/grant.5051052
GRANT_NUMBER: 689617
Source: Self-asserted source
Marek Kasztelnik via DimensionsWizard

Dziedzinowe usługi nowej generacji w infrastrukturze PL-Grid dla Polskiej Nauki

2014-01-01 to 2015-12-31 | Grant
National Centre for Research and Development (Warsaw, PL)
URL: https://app.dimensions.ai/details/grant/grant.4889976
GRANT_NUMBER:

POIG.02.03.00-12-138/13
Source: Self-asserted source
Marek Kasztelnik via DimensionsWizard

Dziedzinowo zorientowane usługi i zasoby infrastruktury PL-GRID dla wspomagania Polskiej Nauki w Europejskiej Przestrzeni Badawczej - PL GRID Plus

2011-10-01 to 2015-05-31 | Grant
National Centre for Research and Development (Warsaw, PL)
URL: https://app.dimensions.ai/details/grant/grant.4889937
GRANT_NUMBER:

POIG.02.03.00-00-096/10
Source: Self-asserted source
Marek Kasztelnik via DimensionsWizard

Virtual Physiological Human: Sharing for Healthcare - A Research Environment (VPH-Share)

2011-03-01 to 2015-02-28 | Grant
Ministry of Science and Higher Education (Warsaw, PL)
URL: https://app.dimensions.ai/details/grant/grant.7419743
GRANT_NUMBER:

269978
Source: Self-asserted source
Marek Kasztelnik via DimensionsWizard

UrbanFlood

2009-12-01 to 2012-11-30 | Grant
European Commission (Brussels, BE)
URL: https://app.dimensions.ai/details/grant/grant.3785758
GRANT_NUMBER: 248767
Source: Self-asserted source
Marek Kasztelnik via DimensionsWizard

GRid enabled access to rich mEDIA content

2006-10-01 to 2009-03-31 | Grant
European Commission (Brussels, BE)
URL: https://app.dimensions.ai/details/grant/grant.3767709
GRANT_NUMBER: 034363
Source: Self-asserted source
Marek Kasztelnik via DimensionsWizard

ViroLab: A virtual laboratory for decision support in viral diseases treatment

2006-03-01 to 2009-08-31 | Grant
European Commission (Brussels, BE)
URL: https://app.dimensions.ai/details/grant/grant.3763006
GRANT_NUMBER: 027446
Source: Self-asserted source
Marek Kasztelnik via DimensionsWizard

Works (30)

A Multiscale Orchestrated Computational Framework to Reveal Emergent Phenomena in Neuroblastoma

SSRN
2023 | Other
DOI: 10.2139/ssrn.4409591
EID:

2-s2.0-85152372834

Part of ISSN: 15565068
Contributors: Carlos, B.; Wertheim, K.Y.; Hervas-Raluy, S.; Sainz-DeMena, D.; Walker, D.; Chisholm, R.; Richmond, P.; Varella, V.; Viceconti, M.; Montero, A. et al.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Digital Twin Simulation Development and Execution on HPC Infrastructures

2023 | Book chapter
DOI: 10.1007/978-3-031-36021-3_2
Contributors: Marek Kasztelnik; Piotr Nowakowski; Jan Meizner; Maciej Malawski; Adam Nowak; Krzysztof Gadek; Karol Zajac; Antonino Amedeo La Mattina; Marian Bubak
Source: check_circle
Crossref
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Preferred source (of 2)‎

Effect of particularisation size on the accuracy and efficiency of a multiscale tumours' growth model

International Journal for Numerical Methods in Biomedical Engineering
2022 | Journal article
DOI: 10.1002/cnm.3657
EID:

2-s2.0-85142178419

Part of ISSN: 20407947 20407939
Contributors: Varella, V.; Quintela, B.D.M.; Kasztelnik, M.; Viceconti, M.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

The EurValve model execution environment: The EurValve Model Execution Environment

Interface Focus
2021 | Journal article
DOI: 10.1098/rsfs.2020.0006
EID:

2-s2.0-85099516405

Part of ISSN: 20428901 20428898
Contributors: Bubak, M.; Czechowicz, K.; Gubała, T.; Hose, D.R.; Kasztelnik, M.; Malawski, M.; Meizner, J.; Nowakowski, P.; Wood, S.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

PRIMAGE project: predictive in silico multiscale analytics to support childhood cancer personalised evaluation empowered by imaging biomarkers

European Radiology Experimental
2020 | Journal article
DOI: 10.1186/s41747-020-00150-9
EID:

2-s2.0-85083041933

Part of ISSN: 25099280
Contributors: Martí-Bonmatí, L.; Alberich-Bayarri, Á.; Ladenstein, R.; Blanquer, I.; Segrelles, J.D.; Cerdá-Alberich, L.; Gkontra, P.; Hero, B.; García-Aznar, J.M.; Keim, D. et al.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Seamlessly Managing HPC Workloads Through Kubernetes

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2020 | Conference paper
DOI: 10.1007/978-3-030-59851-8_20
EID:

2-s2.0-85096417771

Part of ISBN: 9783030598501
Part of ISSN: 16113349 03029743
Contributors: López-Huguet, S.; Segrelles, J.D.; Kasztelnik, M.; Bubak, M.; Blanquer, I.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Estimation of valvular resistance of segmented aortic valves using computational fluid dynamics

Journal of Biomechanics
2019 | Journal article
DOI: 10.1016/j.jbiomech.2019.07.010
EID:

2-s2.0-85069695760

Part of ISSN: 18732380 00219290
Contributors: Hoeijmakers, M.J.M.M.; Silva Soto, D.A.; Waechter-Stehle, I.; Kasztelnik, M.; Weese, J.; Hose, D.R.; de Vosse, F.N.V.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Cloud computing infrastructure for the VPH community

Journal of Computational Science
2018 | Journal article
DOI: 10.1016/j.jocs.2017.06.012
EID:

2-s2.0-85026798433

Part of ISSN: 18777503
Contributors: Nowakowski, P.; Bubak, M.; Bartyński, T.; Gubała, T.; Harężlak, D.; Kasztelnik, M.; Malawski, M.; Meizner, J.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Holistic approach to management of IT infrastructure for environmental monitoring and decision support systems with urgent computing capabilities

Future Generation Computer Systems
2018 | Journal article
DOI: 10.1016/j.future.2016.08.007
EID:

2-s2.0-84995469784

Part of ISSN: 0167739X
Contributors: Balis, B.; Brzoza-Woch, R.; Bubak, M.; Kasztelnik, M.; Kwolek, B.; Nawrocki, P.; Nowakowski, P.; Szydlo, T.; Zielinski, K.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Smart levee monitoring and flood decision support system: Reference architecture and urgent computing management

Procedia Computer Science
2017 | Conference paper
DOI: 10.1016/j.procs.2017.05.192
EID:

2-s2.0-85027368106

Part of ISSN: 18770509
Contributors: Balis, B.; Bartynski, T.; Bubak, M.; Harezlak, D.; Kasztelnik, M.; Malawski, M.; Nowakowski, P.; Pawlik, M.; Wilk, B.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Support for Taverna workflows in the VPH-Share cloud platform

Computer Methods and Programs in Biomedicine
2017 | Journal article
DOI: 10.1016/j.cmpb.2017.05.006
EID:

2-s2.0-85019653165

Part of ISSN: 18727565 01692607
Contributors: Kasztelnik, M.; Coto, E.; Bubak, M.; Malawski, M.; Nowakowski, P.; Arenas, J.; Saglimbeni, A.; Testi, D.; Frangi, A.F.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Dedicated IT infrastructure for Smart Levee Monitoring and Flood Decision Support

E3S Web of Conferences
2016 | Conference paper
DOI: 10.1051/e3sconf/20160714008
EID:

2-s2.0-85013675727

Part of ISSN: 22671242
Contributors: Balis, B.; Bartynski, T.; Brzoza-Woch, R.; Bubak, M.; Harezlak, D.; Kasztelnik, M.; Konieczny, M.; Kwolek, B.; Malawski, M.; Nawrocki, P. et al.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Execution management and efficient resource provisioning for flood decision support

Procedia Computer Science
2015 | Conference paper
DOI: 10.1016/j.procs.2015.05.412
EID:

2-s2.0-84939188961

Part of ISSN: 18770509
Contributors: Balis, B.; Kasztelnik, M.; Malawski, M.; Nowakowski, P.; Wilk, B.; Pawlik, M.; Bubak, M.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

A lightweight method of metadata and data management with DataNet

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2014 | Book
DOI: 10.1007/978-3-319-10894-0_12
EID:

2-s2.0-84921715708

Part of ISSN: 16113349 03029743
Contributors: Hareȩżlak, D.; Kasztelnik, M.; Pawlik, M.; Wilk, B.; Bubak, M.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Towards Provisioning of Reproducible, Reviewable and Reusable In-Silico Experiments with the GridSpace2 Platform

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2014 | Book
DOI: 10.1007/978-3-319-10894-0_9
EID:

2-s2.0-84921821539

Part of ISSN: 16113349 03029743
Contributors: Ciepiela, E.; Wilk, B.; Harężlak, D.; Kasztelnik, M.; Pawlik, M.; Bubak, M.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Development and execution environment for Early Warning Systems for natural disasters

Proceedings - 13th IEEE/ACM International Symposium on Cluster, Cloud, and Grid Computing, CCGrid 2013
2013 | Conference paper
DOI: 10.1109/CCGrid.2013.101
EID:

2-s2.0-84881303993
Contributors: Balis, B.; Bartynski, T.; Bubak, M.; Dyk, G.; Gubala, T.; Kasztelnik, M.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Evaluation of cloud providers for VPH applications

Proceedings - 13th IEEE/ACM International Symposium on Cluster, Cloud, and Grid Computing, CCGrid 2013
2013 | Conference paper
DOI: 10.1109/CCGrid.2013.54
EID:

2-s2.0-84881307940
Contributors: Bubak, M.; Kasztelnik, M.; Malawski, M.; Meizner, J.; Nowakowski, P.; Varma, S.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

The collage authoring environment: From proof-of-concept prototype to pilot service

Procedia Computer Science
2013 | Conference paper
DOI: 10.1016/j.procs.2013.05.241
EID:

2-s2.0-84896920840

Part of ISSN: 18770509
Contributors: Ciepiela, E.; Harȩz̊lak, D.; Kasztelnik, M.; Meizner, J.; Dyk, G.; Nowakowski, P.; Bubak, M.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Scripting language extensions offered by the GridSpace experiment platform

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2012 | Book
DOI: 10.1007/978-3-642-28267-6_17
EID:

2-s2.0-84857725976

ISBN: 9783642282669
Part of ISSN: 03029743 16113349
Contributors: Harȩzlak, D.; Kasztelnik, M.; Ciepiela, E.; Bubak, M.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

The collage authoring environment

Procedia Computer Science
2011 | Conference paper
DOI: 10.1016/j.procs.2011.04.064
EID:

2-s2.0-79958265222

Part of ISSN: 18770509
Contributors: Nowakowski, P.; Ciepiela, E.; Harȩzlak, D.; Kocot, J.; Kasztelnik, M.; Bartyński, T.; Meizner, J.; Dyk, G.; Malawski, M.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

The UrbanFlood common information space for early warning systems

Procedia Computer Science
2011 | Conference paper
DOI: 10.1016/j.procs.2011.04.011
EID:

2-s2.0-79958266110

Part of ISSN: 18770509
Contributors: Balis, B.; Kasztelnik, M.; Bubak, M.; Bartynski, T.; Gubała, T.; Nowakowski, P.; Broekhuijsen, J.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Combining ontologies with domain specific languages: A case study from network configuration software

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2010 | Conference paper
DOI: 10.1007/978-3-642-15543-7_4
EID:

2-s2.0-78649881345

Part of ISBN: 3642155421 9783642155420
Part of ISSN: 03029743 16113349
Contributors: Miksa, K.; Sabina, P.; Kasztelnik, M.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Exploratory programming in the virtual laboratory

Proceedings of the International Multiconference on Computer Science and Information Technology, IMCSIT 2010
2010 | Conference paper
DOI: 10.1109/imcsit.2010.5679740
EID:

2-s2.0-79551561003

Part of ISBN: 9788360810279
Contributors: Ciepiela, E.; Harȩzlak, D.; Kocot, J.; Bartyński, T.; Kasztelnik, M.; Nowakowski, P.; Gubała, T.; Malawski, M.; Bubak, M.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Towards semantic modeling of network physical devices

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2010 | Conference paper
DOI: 10.1007/978-3-642-12261-3_31
EID:

2-s2.0-78649806018

Part of ISBN: 3642122604 9783642122606
Part of ISSN: 03029743 16113349
Contributors: Miksa, K.; Kasztelnik, M.; Sabina, P.; Walter, T.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Building collaborative applications for system-level science

Advances in Parallel Computing
2009 | Conference paper
DOI: 10.3233/978-1-60750-073-5-299
EID:

2-s2.0-84906555444

Part of ISBN: 9781607500735
Part of ISSN: 09275452
Contributors: Bubak, M.; Gubała, T.; Kasztelnik, M.; Malawski, M.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

ViroLab security and virtual organization infrastructure

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2009 | Conference paper
DOI: 10.1007/978-3-642-03644-6_18
EID:

2-s2.0-70350666460

Part of ISBN: 3642036430 9783642036439
Part of ISSN: 03029743 16113349
Contributors: Meizner, J.; Malawski, M.; Ciepiela, E.; Kasztelnik, M.; Harezlak, D.; Nowakowski, P.; Król, D.; Gubała, T.; Funika, W.; Bubak, M. et al.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

High-level scripting approach for building component-based applications on the GRID

Making Grids Work - Proceedings of the CoreGRID Workshop on Programming Models Grid and P2P System Architecture Grid Systems, Tools and Environments
2008 | Conference paper
DOI: 10.1007/978-0-387-78448-9_25
EID:

2-s2.0-84900084621

Part of ISBN: 9780387784472
Contributors: Malawski, M.; Gubala, T.; Kasztelnik, M.; Bartynski, T.; Bubak, M.; Baude, F.; Henrio, L.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Towards a system-level science support

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2008 | Conference paper
DOI: 10.1007/978-3-540-69384-0_11
EID:

2-s2.0-47749114612

Part of ISBN: 3540693831 9783540693833
Part of ISSN: 03029743 16113349
Contributors: Gubała, T.; Kasztelnik, M.; Malawski, M.; Bubak, M.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Virtual laboratory for development and execution of biomedical collaborative applications

Proceedings - IEEE Symposium on Computer-Based Medical Systems
2008 | Conference paper
DOI: 10.1109/CBMS.2008.47
EID:

2-s2.0-51849084394

Part of ISBN: 9780769531656
Part of ISSN: 10637125
Contributors: Bubak, M.; Balis, B.; Ciepiela, E.; Kocot, J.; Pelczar, M.; Tirado-Ramos, A.; Gubala, T.; Funika, W.; Harezlak, D.; Krol, D. et al.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier

Fault tolerant grid registry

Distributed and Parallel Systems: From Cluster to Grid Computing
2007 | Book chapter
Part of DOI: 10.1007/978-0-387-69858-8_14
EID:

2-s2.0-84892823943

ISBN: 0387698574 9780387698571
Contributors: Kasztelnik, M.; Supervisor, M.B.; Górka, C.; Malawski, M.; Gubala, T.
Source: Self-asserted source
Marek Kasztelnik via Scopus - Elsevier
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