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Scopus Author ID: 36062133300
Scopus Author ID: 36062133300

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Employment (4)

Tilburg University: Tilburg, NL

Employment
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Tilburg University - PURE

Tilburg University: Tilburg, Noord-Brabant, NL

2021-03-01 to present | Assistant Prof. (Cognitive Science and Artificial Intelligence)
Employment
Source: Self-asserted source
Gorkem Saygili

Ankara University: Ankara, Ankara, TR

2017-06-01 to 2021-02-28 | Assistant Professor (Biomedical Engineering)
Employment
Source: Self-asserted source
Gorkem Saygili

Leiden University: Leiden, Holland, NL

2014-10-16 to 2016-10-16 | Post Doc (Division of Image Processing (LKEB))
Employment
Source: Self-asserted source
Gorkem Saygili

Education and qualifications (3)

Technische Universiteit Delft: Delft, Zuid-Holland, NL

2010-10-16 to 2015-06-17 | PhD (Pattern Recognition and Bioinformatics)
Education
Source: Self-asserted source
Gorkem Saygili

Koç Üniversitesi Fen Fakültesi: Istanbul, TR

2008-02-01 to 2010-02-01 | Master of Science (Electrical and Computer Engineering )
Education
Source: Self-asserted source
Gorkem Saygili

Bilkent University: Ankara, TR

2003-09-01 to 2007-06-01 | Bachelor of Science (Electrical and Electronics Engineering)
Education
Source: Self-asserted source
Gorkem Saygili

Works (27)

Weighted t-Distributed Stochastic Neighbor Embedding for Projection-Based Clustering

2024 | Book chapter
DOI: 10.1007/978-3-031-49552-6_12
Contributors: Gonzalo Nápoles; Leonardo Concepción; Büşra Özgöde Yigin; Görkem Saygili; Koen Vanhoof; Rafael Bello
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Generating Artificial PET Scans from Low Dose CT Scans with an Adapted Dual Diffusion Implicit Bridges (DDIBs) model

35th Benelux Conference on Artificial Intelligence and the 32th Belgian Dutch Conference on Machine Learning
2024-11-19 | Conference paper | Author
SOURCE-WORK-ID:

713fd978-c3f0-443b-b2b7-667921b988c0
Contributors: Francesca Marogna; Martijn van Leeuwen; Fabian Hoitsma; Gorkem Saygili; Lee Ling Ong
Source: check_circle
Tilburg University - PURE

Deep Learning Classifiers to Reduce False Positives in Osteolytic Lesion Segmentation Results from Low-Dose CT Scans of Multiple Myeloma

Artificial Intelligence and Machine Learning. BNAIC/Benelearn 2023
2024-11-02 | Book chapter | Author
DOI: 10.1007/978-3-031-74650-5_9
SOURCE-WORK-ID:

b25bdb87-f2e9-4aee-a7b9-197757470512

Part of ISBN: 978-3-031-74650-5
Part of ISBN: 978-3-031-74649-9
Contributors: Martijn van Leeuwen; Munirdin Jadikar; Thijs van Oudheusden; Sebastian Oei; Bastiaan Steunenberg; Rik Kint; Erik Ranschaert; Gerlof Bosma; Gorkem Saygili; Lee Ling Ong
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Tilburg University - PURE

Continual learning approaches for single cell RNA sequencing data

Scientific Reports
2023-09-15 | Journal article | Author
DOI: 10.1038/s41598-023-42482-7
SOURCE-WORK-ID:

94936461-e3d8-4ac9-b67c-93957a0a82f9

WOSUID:

001068962200026

EID:

2-s2.0-85171383997

PMID: 37714869
Contributors: Gorkem Saygili; Büşra Özgöde Yigin
Source: check_circle
Tilburg University - PURE

Effect of distance measures on confidences of t-SNE embeddings and its implications on clustering for scRNA-seq data

Scientific Reports
2023-04-21 | Journal article | Author
DOI: 10.1038/s41598-023-32966-x
SOURCE-WORK-ID:

d3e9b3c6-55ae-46f3-9f18-8f9c8073c261

EID:

2-s2.0-85153553601

PMID: 37085593
Contributors: Büşra Özgöde Yigin; Gorkem Saygili
Source: check_circle
Tilburg University - PURE

A deep learning-based approach to detect and segment osteolytic bone lesions in whole-body, low-dose CT imaging of multiple myeloma patients

EuSoMII Annual Meeting 2022 ‘Your portal to AI’, Valencia, Spain, 14/10/22
2022-10-15 | Conference poster | Author
SOURCE-WORK-ID:

66f15285-05d9-4922-8e8b-f3d31b7b4d26
Contributors: Lee Ling Ong; Martijn van Leeuwen; Gorkem Saygili; Wessel Hoff ; Maarten Heres; Thijs van Oudheusden; Bastiaan Steunenberg; Rik Kint; Gerlof Bosma; Erik Ranschaert
Source: check_circle
Tilburg University - PURE

Confidence estimation for t-SNE embeddings using random forest

International Journal of Machine Learning and Cybernetics
2022-09-10 | Journal article | Author
DOI: 10.1007/s13042-022-01635-2
SOURCE-WORK-ID:

88dd5e15-ea76-4327-a27b-db08167a1ed0
Contributors: Büşra Özgöde Yigin; Gorkem Saygili
Source: check_circle
Tilburg University - PURE

Exploring the attention process differentiation of attention deficit hyperactivity disorder (ADHD) symptomatic adults using artificial intelligence on electroencephalography (EEG) signals

Turkish Journal of Electrical Engineering & Computer Sciences
2021 | Journal article | Author
SOURCE-WORK-ID:

f8594cd8-89ed-460b-be3a-d1ab81b09a9a
Contributors: Gokhan Guney; Esra Kisacik; Canan Kalaycioglu; Gorkem Saygili
Source: check_circle
Tilburg University - PURE

An Overview of Deep Learning Algorithms and Their Applications in Neuropsychiatry

Clinical Psychopharmacology and Neuroscience
2021-05-31 | Journal article
DOI: 10.9758/cpn.2021.19.2.206
Contributors: Gokhan Guney; Busra Ozgode Yigin; Necdet Guven; Yasemin Hosgoren Alici; Burcin Colak; Gamze Erzin; Gorkem Saygili
Source: check_circle
Crossref

Predicting medical image registration error through independent directions

Signal, Image and Video Processing
2021-02-30 | Journal article
DOI: 10.1007/s11760-020-01784-3
Contributors: Gorkem Saygili
Source: check_circle
Crossref

A supervised learning approach for detecting erroneous samples in embeddings

TURKISH JOURNAL OF ELECTRICAL ENGINEERING & COMPUTER SCIENCES
2020-09-25 | Journal article
DOI: 10.3906/elk-1909-162
Contributors: Görkem SAYGILI
Source: check_circle
Crossref

Predicting medical image registration error with block-matching using three orthogonal planes approach

Signal, Image and Video Processing
2020-09-06 | Journal article
DOI: 10.1007/s11760-020-01650-2
Contributors: Gorkem Saygili
Source: check_circle
Crossref

Local-search based prediction of medical image registration error

Progress in Biomedical Optics and Imaging - Proceedings of SPIE
2018 | Conference paper
DOI: 10.1117/12.2293740
EID:

2-s2.0-85047849269
Contributors: Saygili, G.
Source: Self-asserted source
Gorkem Saygili via Scopus - Elsevier

Accuracy estimation for medical image registration using regression forests

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2016 | Book
DOI: 10.1007/978-3-319-46726-9_13
EID:

2-s2.0-84996550744
Contributors: Sokooti, H.; Saygili, G.; Glocker, B.; Lelieveldt, B.P.F.; Staring, M.
Source: Self-asserted source
Gorkem Saygili via Scopus - Elsevier

Confidence estimation for medical image registration based on stereo confidences

IEEE Transactions on Medical Imaging
2016 | Journal article
DOI: 10.1109/TMI.2015.2481609
EID:

2-s2.0-84959353749
Contributors: Saygili, G.; Staring, M.; Hendriks, E.A.
Source: Self-asserted source
Gorkem Saygili via Scopus - Elsevier

Adaptive stereo similarity fusion using confidence measures

Computer Vision and Image Understanding
2015 | Journal article
DOI: 10.1016/j.cviu.2015.02.005
EID:

2-s2.0-84939939223
Contributors: Saygili, G.; Van Der Maaten, L.; Hendriks, E.A.
Source: Self-asserted source
Gorkem Saygili via Scopus - Elsevier

Confidence-guided adaptive scanline optimization for stereo matching,Güven-tabanli uyarlanir doǧrusal tarama kullanarak stereo karşila̧stirma

2014 22nd Signal Processing and Communications Applications Conference, SIU 2014 - Proceedings
2014 | Conference paper
DOI: 10.1109/SIU.2014.6830350
EID:

2-s2.0-84903786072
Contributors: Saygili, G.; Hendriks, E.A.; Bilgi, A.S.; Kalkan, H.
Source: Self-asserted source
Gorkem Saygili via Scopus - Elsevier

Hybrid kinect depth map refinement for transparent objects

Proceedings - International Conference on Pattern Recognition
2014 | Conference paper
DOI: 10.1109/ICPR.2014.474
EID:

2-s2.0-84919934124
Contributors: Saygili, G.; Van Der Maaten, L.; Hendriks, E.A.
Source: Self-asserted source
Gorkem Saygili via Scopus - Elsevier

Stereo Similarity Metric Fusion Using Stereo Confidence

Proceedings - International Conference on Pattern Recognition
2014 | Conference paper
DOI: 10.1109/ICPR.2014.376
EID:

2-s2.0-84919934888
Contributors: Saygili, G.; Van Der Maaten, L.; Hendriks, E.A.
Source: Self-asserted source
Gorkem Saygili via Scopus - Elsevier

Estimating the missing kinect depth information by polynomial fitting,Polinom uydurma ile kinect' de kayip derinlik bilgisi tahmini

2013 21st Signal Processing and Communications Applications Conference, SIU 2013
2013 | Conference paper
DOI: 10.1109/SIU.2013.6531177
EID:

2-s2.0-84880856628
Contributors: Saygili, G.; Balim, C.; Kalkan, H.; Hendriks, E.A.
Source: Self-asserted source
Gorkem Saygili via Scopus - Elsevier

Hierarchical grid-based learning approach for recovering unknown depths in kinect depth maps

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2013 | Book
DOI: 10.1007/978-3-642-39094-4_75
EID:

2-s2.0-84884481854
Contributors: Saygili, G.; Balim, C.; Kalkan, H.; Hendriks, E.A.
Source: Self-asserted source
Gorkem Saygili via Scopus - Elsevier

Accelerating cost aggregation for real-time stereo matching

Proceedings of the International Conference on Parallel and Distributed Systems - ICPADS
2012 | Conference paper
DOI: 10.1109/ICPADS.2012.71
EID:

2-s2.0-84874086134
Contributors: Fang, J.; Varbanescu, A.L.; Shen, J.; Sips, H.; Saygili, G.; Van Der Maaten, L.
Source: Self-asserted source
Gorkem Saygili via Scopus - Elsevier

Improving segment based stereo matching using SURF key points

Proceedings - International Conference on Image Processing, ICIP
2012 | Conference paper
DOI: 10.1109/ICIP.2012.6467524
EID:

2-s2.0-84875839763
Contributors: Saygili, G.; Van Der Maaten, L.; Hendriks, E.A.
Source: Self-asserted source
Gorkem Saygili via Scopus - Elsevier

Evaluation of asymmetric stereo video coding and rate scaling for adaptive 3D video streaming

IEEE Transactions on Broadcasting
2011 | Journal article
DOI: 10.1109/TBC.2011.2131450
EID:

2-s2.0-79957586248
Contributors: Saygili, G.; Gürler, C.G.; Tekalp, A.M.
Source: Self-asserted source
Gorkem Saygili via Scopus - Elsevier

Flexible transport of 3-d video over networks

Proceedings of the IEEE
2011 | Journal article
DOI: 10.1109/JPROC.2010.2100010
EID:

2-s2.0-79952986489
Contributors: Gürler, C.G.; Gorkemli, B.; Saygili, G.; Tekalp, A.M.
Source: Self-asserted source
Gorkem Saygili via Scopus - Elsevier

Quality assessment of asymmetric stereo video coding

Proceedings - International Conference on Image Processing, ICIP
2010 | Conference paper
DOI: 10.1109/ICIP.2010.5653339
EID:

2-s2.0-78651096609
Contributors: Saygili, G.; Göktuǧ Gürler, C.; Murat Tekalp, A.
Source: Self-asserted source
Gorkem Saygili via Scopus - Elsevier

3D display dependent quality evaluation and rate allocation using scalable video coding

Proceedings - International Conference on Image Processing, ICIP
2009 | Conference paper
DOI: 10.1109/ICIP.2009.5414317
EID:

2-s2.0-77951970637
Contributors: Saygili, G.; Gürler, C.G.; Tekalp, A.M.
Source: Self-asserted source
Gorkem Saygili via Scopus - Elsevier
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