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King's College London profile page

Other IDs

Scopus Author ID: 56681848600
Scopus Author ID: 57202382565
Scopus Author ID: 57202382565

Keywords

complex networks, citation, causal structure

Biography

Research Associate in Biomedical Engineering at Kings College London

Activities

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Employment (2)

Kings College London: London, GB

2017-06-01 to present | Research Associate (School of Biomedical Engineering & Imaging Sciences)
Employment
Source: Self-asserted source
James Clough

King's College London: London, GB

2019-12-19
Employment
Source: check_circle
King's College London

Education and qualifications (2)

Imperial College London: London, London, GB

2013-10-01 to 2017-03-01 | PhD (Physics)
Education
Source: Self-asserted source
James Clough

Imperial College London: London, GB

2009-10-01 to 2013-07-01 | MSci Theoretical Physics (Physics)
Education
Source: Self-asserted source
James Clough

Works (33)

A Topological Loss Function for Deep-Learning Based Image Segmentation Using Persistent Homology

IEEE Transactions on Pattern Analysis and Machine Intelligence
2022-12-01 | Journal article
DOI: 10.1109/TPAMI.2020.3013679
Contributors: James R. Clough; Nicholas Byrne; Ilkay Oksuz; Veronika A. Zimmer; Julia A. Schnabel; Andrew P. King
Source: check_circle
Crossref

A persistent homology-based topological loss for CNN-based multi-class segmentation of CMR

IEEE Transactions on Medical Imaging
2022-08-31 | Journal article | Author
DOI: 10.48550/arXiv.2107.12689
DOI: 10.1109/TMI.2022.3203309
SOURCE-WORK-ID:

2a5bd72a-b2a6-4158-b1b6-628cfd3d2681

PMID: 36044487
EID:

2-s2.0-85137943661
Contributors: Nicholas Byrne; James Clough; Israel Valverde; Giovanni Montana; Andrew Peter King
Source: check_circle
King's College London

A Persistent Homology-Based Topological Loss Function for Multi-class CNN Segmentation of Cardiac MRI

Statistical Atlases and Computational Models of the Heart. MandMs and EMIDEC Challenges - 11th International Workshop, STACOM 2020, Held in Conjunction with MICCAI 2020, Revised Selected Papers
2021 | Conference paper | Author
DOI: 10.1007/978-3-030-68107-4_1
SOURCE-WORK-ID:

3480e8b0-120e-441d-b70a-a242457d8d84

EID:

2-s2.0-85101494372

Part of ISBN: 9783030681067
Contributors: Nicholas Byrne; James Clough; Giovanni Montana; Andrew P. King
Source: check_circle
King's College London

Left Ventricle Quantification Challenge: A Comprehensive Comparison and Evaluation of Segmentation and Regression for Mid-Ventricular Short-Axis Cardiac MR Data

IEEE Journal of Biomedical and Health Informatics
2021-09 | Journal article
DOI: 10.1109/JBHI.2021.3064353
Contributors: Wufeng Xue; Jiahui Li; Zhiqiang Hu; Eric Kerfoot; James Clough; Ilkay Oksuz; Hao Xu; Vicente Grau; Fumin Guo; Matthew Ng et al.
Source: check_circle
Crossref

Interpretable deep models for cardiac resynchronisation therapy response prediction

Medical Image Computing and Computer Assisted Intervention – MICCAI 2020 - 23rd International Conference, Proceedings
2020 | Conference paper | Author
DOI: 10.1007/978-3-030-59710-8_28
SOURCE-WORK-ID:

d9618add-d90d-4043-bb18-2b1495d090db

EID:

2-s2.0-85093068630

Part of ISBN: 9783030597092
Contributors: Esther Puyol-Antón; Chen Chen; James Clough; Bram Ruijsink; Baldeep S. Sidhu; Justin Gould; Bradley Porter; Marc Elliott; Vishal Mehta; Daniel Rueckert et al.
Source: check_circle
King's College London

Deep Learning-Based Detection and Correction of Cardiac MR Motion Artefacts During Reconstruction for High-Quality Segmentation

IEEE Transactions on Medical Imaging
2020-12 | Journal article
DOI: 10.1109/TMI.2020.3008930
Contributors: Ilkay Oksuz; James R. Clough; Bram Ruijsink; Esther Puyol Anton; Aurelien Bustin; Gastao Cruz; Claudia Prieto; Andrew P. King; Julia A. Schnabel
Source: check_circle
Crossref

A Topological Loss Function for Deep-Learning based Image Segmentation using Persistent Homology

IEEE Transactions on Pattern Analysis and Machine Intelligence
2020-09-04 | Journal article | Author
SOURCE-WORK-ID:

bc80e8e5-df4a-492c-8864-657bfa3c4d77

EID:

2-s2.0-85101301735
Contributors: James Clough; Nicholas Byrne; Ilkay Oksuz; Veronika Zimmer; Julia Anne Schnabel; Andrew Peter King
Source: check_circle
King's College London

A multi-scale variational neural network for accelerating motion-compensated whole-heart 3D coronary MR angiography

Magnetic Resonance Imaging
2020-07 | Journal article | Author
DOI: 10.1016/j.mri.2020.04.007
SOURCE-WORK-ID:

5c795b96-2d3a-471e-933b-426855c40cf1

PMID: 32353528
EID:

2-s2.0-85084453689
Contributors: Niccolo Fuin; Aurelien Bustin; Thomas Küstner; Ilkay Oksuz; James Clough; Andrew Peter King; Julia Anne Schnabel; Rene Michael Botnar; Claudia Prieto
Source: check_circle
King's College London

Weighted Manifold Alignment using Wave Kernel Signatures for Aligning Medical Image Datasets

IEEE Transactions on Pattern Analysis and Machine Intelligence
2020-04-01 | Journal article | Author
DOI: 10.1109/TPAMI.2019.2891600
SOURCE-WORK-ID:

512bf96a-60ca-401d-a1d8-173323992c5c

EID:

2-s2.0-85081631371
Contributors: James Clough; Daniel R. Balfour; Gastao Cruz; Paul Marsden; Claudia Prieto; Andrew Reader; Andrew Peter King
Source: check_circle
King's College London
grade
Preferred source (of 2)‎

Assessing the Impact of Blood Pressure on Cardiac Function Using Interpretable Biomarkers and Variational Autoencoders

Statistical Atlases and Computational Models of the Heart. Multi-Sequence CMR Segmentation, CRT-EPiggy and LV Full Quantification Challenges - 10th International Workshop, STACOM 2019, Held in Conjunction with MICCAI 2019, Revised Selected Papers
2020-01-23 | Conference paper | Author
DOI: 10.1007/978-3-030-39074-7_3
SOURCE-WORK-ID:

cf362ced-61ce-4f7e-9c5f-7ad19e603a83

EID:

2-s2.0-85081887604

Part of ISBN: 9783030390730
Contributors: Puyol-Anton; Bram Ruijsink; James Clough; Ilkay Oksuz; Daniel Rueckert; Reza Razavi; Andrew Peter King
Source: check_circle
King's College London

High-quality segmentation of low quality cardiac MR images using k-space artefact correction

Proceedings of Machine Learning Research
2019 | Conference paper | Author
SOURCE-WORK-ID:

c903e27a-2ab1-4f6b-be4e-2d732a9d95ce

EID:

2-s2.0-85089728894
Contributors: Ilkay Oksuz; James Clough; Wenjia Bai; Bram Ruijsink; Puyol-Anton; Gastao Cruz; Claudia Prieto; Andrew Peter King; Julia Anne Schnabel
Source: check_circle
King's College London

Self-supervised Recurrent Neural Network for 4D Abdominal and In-utero MR ImagingMachine Learning for Medical Image Reconstruction

MICCAI workshop on Machine Learning for Medical Image Reconstruction
2019 | Conference paper | Author
DOI: 10.1007/978-3-030-33843-5_2
SOURCE-WORK-ID:

ca91ce7a-1e8d-445b-ac6a-65e6d997bee4

EID:

2-s2.0-85076209471
Contributors: Tong Zhang; Laurence H Jackson; Alena Uus; James Clough; Lisa Story; mary rutherford; Joseph Hajnal; Maria Deprez
Source: check_circle
King's College London

Respiration resolved imaging with continuous stable state 2D acquisition using linear frequency SWEEP

Magnetic Resonance in Medicine
2019-11-01 | Journal article | Author
DOI: 10.1002/mrm.27834
SOURCE-WORK-ID:

c53f16da-e82d-4d92-b0d8-9aba91bcd6a1

EID:

2-s2.0-85067401649
Contributors: Laurence H Jackson; Anthony Neil Price; Jana Hutter; Alison Elizabeth Puiyun Ho; Tom Roberts; Paddy J. Slator; James Clough; Maria Deprez; Laura McCabe; Shaihan Jalal Malik et al.
Source: check_circle
King's College London

Image Reconstruction in a Manifold of Image Patches

Machine Learning for Medical Image Reconstruction - 2nd International Workshop, MLMIR 2019, held in Conjunction with MICCAI 2019, Proceedings
2019-10-24 | Conference paper | Author
DOI: 10.1007/978-3-030-33843-5_21
SOURCE-WORK-ID:

2c43232e-2170-4ef2-894e-f7fcd290f03e

EID:

2-s2.0-85076214210

Part of ISBN: 9783030338428
Contributors: Alberto Gomez; Veronika Zimmer; Nicolas Toussaint; Robert Wright; James Clough; Bishesh Khanal; Milou PM van Poppel; Emily Skelton; Jackie Matthews; Julia Anne Schnabel
Source: check_circle
King's College London

Topology-preserving augmentation for cnn-based segmentation of congenital heart defects from 3d paediatric cmr

Smart Ultrasound Imaging and Perinatal, Preterm and Paediatric Image Analysis - 1st International Workshop, SUSI 2019, and 4th International Workshop, PIPPI 2019, Held in Conjunction with MICCAI 2019, Proceedings
2019-10-08 | Conference paper | Author
DOI: 10.1007/978-3-030-32875-7_20
SOURCE-WORK-ID:

89412699-7026-4263-bd3e-e013e6c1fe7c

EID:

2-s2.0-85075719250

Part of ISBN: 9783030328740
Contributors: Nicholas Byrne; James Clough; Isra Valverde; Giovanni Montana; Andrew Peter King
Source: check_circle
King's College London

dAUTOMAP

conference abstracts of ISMRM
2019-09-24 | Journal article | Author
SOURCE-WORK-ID:

2611da76-8ada-4610-bbbc-66854baa0bf7

ARXIV: http://arxiv.org/abs/1909.10995v2
Contributors: Jo Schlemper; Ilkay Oksuz; James Clough; Jinming Duan; Andrew Peter King; Julia Anne Schnabel; Joseph Hajnal; Daniel Rueckert
Source: check_circle
King's College London

Automatic CNN-based detection of cardiac MR motion artefacts using k-space data augmentation and curriculum learning

Medical Image Analysis
2019-07-01 | Journal article | Author
DOI: 10.1016/j.media.2019.04.009
SOURCE-WORK-ID:

9c3d36d3-c88a-4797-94c0-0e9c4d65f46a

EID:

2-s2.0-85064952229
Contributors: Ilkay Oksuz; Jacobus Bernardus Ruijsink; Puyol-Anton; James Clough; Gastao Cruz; Aurelien Bustin; Claudia Prieto; Rene Michael Botnar; Daniel Rueckert; Julia Anne Schnabel et al.
Source: check_circle
King's College London

Mechanically Powered Motion Imaging Phantoms

2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2019
2019-07-01 | Conference paper | Author
DOI: 10.1109/EMBC.2019.8856577
SOURCE-WORK-ID:

a19a1e13-fd96-42c3-bd1f-ddf8bb48cd3d

EID:

2-s2.0-85077898429

Part of ISBN: 9781538613115
Contributors: Alberto Gomez; Cornelia Schmitz; Markus Henningsson; James Housden; Yohan Noh; Veronika A. Zimmer; James Clough; Ilkay Oksuz; Nicolas Toussaint; Andrew Peter King et al.
Source: check_circle
King's College London

Explicit Topological Priors for Deep-Learning Based Image Segmentation Using Persistent Homology

Information Processing in Medical Imaging - 26th International Conference, IPMI 2019, Proceedings
2019-05-22 | Conference paper | Author
DOI: 10.1007/978-3-030-20351-1_2
SOURCE-WORK-ID:

5576e2e3-a7b2-452e-afcf-549038c273f9

EID:

2-s2.0-85066130921

Part of ISBN: 9783030203504
Contributors: James Clough; Ilkay Oksuz; Nicholas Byrne; Julia Anne Schnabel; Andrew Peter King
Source: check_circle
King's College London

Magnetic resonance fingerprinting using recurrent neural networks

ISBI 2019 - 2019 IEEE International Symposium on Biomedical Imaging
2019-04-01 | Conference paper | Author
DOI: 10.1109/ISBI.2019.8759502
SOURCE-WORK-ID:

439b4dec-45e8-4c16-bdf9-289a4ff2577e

EID:

2-s2.0-85073892391

Part of ISBN: 9781538636411
Contributors: Ilkay Oksuz; Gastao Cruz; James Clough; Aurelien Bustin; Nicolo Fuin; Rene Michael Botnar; Claudia Prieto; Andrew Peter King; Julia Anne Schnabel
Source: check_circle
King's College London

Global and local interpretability for cardiac MRI classification

Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings
2019-01-01 | Conference paper | Author
DOI: 10.1007/978-3-030-32251-9_72
SOURCE-WORK-ID:

e40b9fe7-507d-4b45-81ec-69985df6625b

EID:

2-s2.0-85075650743

Part of ISBN: 9783030322502
Contributors: James Clough; Ilkay Oksuz; Puyol-Anton; Bram Ruijsink; Andrew Peter King; Julia Anne Schnabel
Source: check_circle
King's College London

Left-Ventricle Quantification Using Residual U-Net

Statistical Atlases and Computational Models of the Heart. Atrial Segmentation and LV Quantification Challenges - 9th International Workshop, STACOM 2018, Held in Conjunction with MICCAI 2018, Revised Selected Papers
2019-01-01 | Conference paper | Author
DOI: 10.1007/978-3-030-12029-0_40
SOURCE-WORK-ID:

4943f364-f436-40b9-b28c-b06fa0fdc031

EID:

2-s2.0-85064054978

Part of ISBN: 9783030120283
Contributors: Eric Kerfoot; James Clough; Ilkay Oksuz; Jack Lee; Andrew Peter King; Julia Anne Schnabel
Source: check_circle
King's College London

Pseudo-normal PET synthesis with generative adversarial networks for localising hypometabolism in epilepsies

Simulation and Synthesis in Medical Imaging - 4th International Workshop, SASHIMI 2019, Held in Conjunction with MICCAI 2019, Proceedings
2019-01-01 | Conference paper | Author
DOI: 10.1007/978-3-030-32778-1_5
SOURCE-WORK-ID:

ee32e58a-ec56-4d3a-bca6-55dd0497d277

EID:

2-s2.0-85075653008

Part of ISBN: 9783030327774
Contributors: Siti Nurbaya Yaakub; McGinnity CJ; James Clough; Eric Kerfoot; Nadine Girard; Eric Guedj; Alexander Hammers
Source: check_circle
King's College London

Automated CNN-based reconstruction of short-axis cardiac MR sequence from real-time image data

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2018 | Book
DOI: 10.1007/978-3-030-00946-5_4
EID:

2-s2.0-85053904962
Contributors: Kerfoot, E.; Puyol Anton, E.; Ruijsink, B.; Clough, J.; King, A.P.; Schnabel, J.A.
Source: Self-asserted source
James Clough via Scopus - Elsevier

Evaluation of strategies for PET motion correction - Manifold learning vs. Deep learning

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2018 | Book
DOI: 10.1007/978-3-030-02628-8_7
EID:

2-s2.0-85056466680
Contributors: Clough, J.R.; Balfour, D.R.; Prieto, C.; Reader, A.J.; Marsden, P.K.; King, A.P.
Source: Self-asserted source
James Clough via Scopus - Elsevier

PET-MR respiratory signal estimation using semi-supervised manifold alignment

Proceedings - International Symposium on Biomedical Imaging
2018 | Conference paper
DOI: 10.1109/ISBI.2018.8363647
EID:

2-s2.0-85048092166
Contributors: Balfour, D.R.; Clough, J.R.; Chen, X.; Belzunce, M.; Prieto, C.; Marsden, P.K.; Reader, A.J.; King, A.P.
Source: Self-asserted source
James Clough via Scopus - Elsevier
grade
Preferred source (of 2)‎

Cardiac MR Motion Artefact Correction from K-space Using Deep Learning-Based Reconstruction

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2018-09-12 | Journal article | Author
DOI: 10.1007/978-3-030-00129-2_3
SOURCE-WORK-ID:

861a247f-3fd4-4bef-90bf-b24fe011c334

EID:

2-s2.0-85053935756
Contributors: Ilkay Oksuz; James Clough; Aurelien Bustin; Gastao Cruz; Claudia Prieto; Rene Michael Botnar; Daniel Rueckert; Julia Anne Schnabel; Andrew P. King
Source: check_circle
King's College London
grade
Preferred source (of 2)‎

MRI slice stacking using manifold alignment and wave kernel signatures

2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018)
2018-05-24 | Conference paper | Author
DOI: 10.1109/ISBI.2018.8363583
SOURCE-WORK-ID:

3711da02-1920-4c6c-94a1-f93740f1d2a5

EID:

2-s2.0-85048125763
Contributors: James Clough; Daniel R. Balfour; Paul Marsden; Claudia Prieto; Andrew Reader; Andrew Peter King
Source: check_circle
King's College London
grade
Preferred source (of 2)‎

Neural Embeddings of Graphs in Hyperbolic Space

arXiv preprint arXiv:1705.10359
2017 | Journal article
Source: Self-asserted source
James Clough

Embedding graphs in Lorentzian spacetime

PLOS ONE
2017-11-06 | Journal article
DOI: 10.1371/journal.pone.0187301
Contributors: James R. Clough; Naoki Masuda; Tim S. Evans
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

What is the dimension of citation space?

Physica A: Statistical Mechanics and its Applications
2016-04 | Journal article
DOI: 10.1016/j.physa.2015.12.053
Contributors: James R. Clough; Tim S. Evans
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Time & citation networks

Proceedings of ISSI 2015 Istanbul: 15th International Society of Scientometrics and Informetrics Conference
2015 | Conference paper
EID:

2-s2.0-84991045130
Contributors: Clough, J.R.; Evans, T.S.
Source: Self-asserted source
James Clough via Scopus - Elsevier

Transitive reduction of citation networks

Journal of Complex Networks
2015 | Journal article
DOI: 10.1093/comnet/cnu039
EID:

2-s2.0-84930944287
Contributors: Clough, J.R.; Gollings, J.; Loach, T.V.; Evans, T.S.
Source: Self-asserted source
James Clough via Scopus - Elsevier
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