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Employment (1)

Harvard Medical School: Boston, MA, US

2016-10-29 to present | Postdoc (Department of Systems Biology)
Employment
Source: Self-asserted source
Ruoshi Yuan

Education and qualifications (1)

Shanghai Jiao Tong University: Shanghai, CN

PhD (Biomedical Engineering)
Education
Source: Self-asserted source
Ruoshi Yuan

Works (25)

The complex landscape of haematopoietic lineage commitments is encoded in the coarse-grained endogenous network

Royal Society Open Science
2021-11 | Journal article
Contributors: Mengyao Wang; Junqiang Wang; Xingxing Zhang; Ruoshi Yuan
Source: check_circle
Crossref

Correction to: ‘Dynamical modelling of secondary metabolism and metabolic switches in Streptomyces xiamenensis 318’

Royal Society Open Science
2019-06-28 | Journal article
Contributors: Xiao-Mei Zhu; Xing-Xing Zhang; Run-Tan Cheng; He-Lin Yu; Ruo-Shi Yuan; Xu-Liang Bu; Jun Xu; Ping Ao; Yong-Cong Cheng; Min-Juan Xu
Source: check_circle
Crossref

Dynamical modelling of secondary metabolism and metabolic switches in Streptomyces xiamenensis 318

Royal Society Open Science
2019-04-26 | Journal article
Contributors: Xiao-Mei Zhu; Xing-Xing Zhang; Run-Tan Cheng; He-Lin Yu; Ruo-Shi Yuan; Xu-Liang Bu; Jun Xu; Ping Ao; Yong-Cong Chen; Min-Juan Xu
Source: check_circle
Crossref

Beyond cancer genes: colorectal cancer as robust intrinsic states formed by molecular interactions

Open Biology
2017-11 | Journal article
Contributors: Ruoshi Yuan; Suzhan Zhang; Jiekai Yu; Yanqin Huang; Demin Lu; Runtan Cheng; Sui Huang; Ping Ao; Shu Zheng; Leroy Hood et al.
Source: check_circle
Crossref

SDE decomposition and A-type stochastic interpretation in nonequilibrium processes

Frontiers of Physics
2017-09-07 | Journal article
Contributors: Ruoshi Yuan; Ying Tang; Ping Ao
Source: Self-asserted source
Ruoshi Yuan via Crossref Metadata Search

Coarse-grained endogenous network predicts main dynamical sequences in myeloid differentiation and trans-differentiation

SCIENTIA SINICA Vitae
2017-06-01 | Journal article
Contributors: Hang SU; GaoWei WANG; RuoShi YUAN; Ping AO
Source: Self-asserted source
Ruoshi Yuan via Crossref Metadata Search

Comment on “Construction of the landscape for multi-stable systems: Potential landscape, quasi-potential, A-type integral and beyond” [J. Chem. Phys. 144, 094109 (2016)]

The Journal of Chemical Physics
2016-10-14 | Journal article
Contributors: Ruoshi Yuan; Ying Tang; Ping Ao
Source: check_circle
Crossref

From molecular interaction to acute promyelocytic leukemia: Calculating leukemogenesis and remission from endogenous molecular-cellular network

Scientific Reports
2016-04 | Journal article
Contributors: Ruoshi Yuan; Xiaomei Zhu; Jerald P. Radich; Ping Ao
Source: Self-asserted source
Ruoshi Yuan via Crossref Metadata Search

Anomalous free energy changes induced by topology

Physical Review E
2015 | Journal article
Contributors: Ying Tang; Ruoshi Yuan; Ping Ao
Source: Self-asserted source
Ruoshi Yuan via Crossref Metadata Search

Work relations connecting nonequilibrium steady states without detailed balance

Physical Review E
2015-04-07 | Journal article
Contributors: Ying Tang; Ruoshi Yuan; Jianhong Chen; Ping Ao
Source: Self-asserted source
Ruoshi Yuan via Crossref Metadata Search

Controlling symmetry-breaking states by a hidden quantity in multiplicative noise

2014 | Journal article
DOI:

10.1103/PhysRevE.90.052121

EID:

2-s2.0-84912569683

Contributors: Tang, Y.; Yuan, R.; Chen, J.; Ao, P.
Source: Self-asserted source
Ruoshi Yuan via Scopus - Elsevier

Lyapunov function as potential function: A dynamical equivalence

2014 | Journal article
DOI:

10.1088/1674-1056/23/1/010505

EID:

2-s2.0-84893155545

Contributors: Yuan, R.-S.; Ma, Y.-A.; Yuan, B.; Ao, P.
Source: Self-asserted source
Ruoshi Yuan via Scopus - Elsevier

Potential function in a continuous dissipative chaotic system: Decomposition scheme and role of strange attractor

2014 | Journal article
DOI:

10.1142/S0218127414500151

EID:

2-s2.0-84896260160

Contributors: Ma, Y.; Tan, Q.; Yuan, R.; Yuan, B.; Ao, P.
Source: Self-asserted source
Ruoshi Yuan via Scopus - Elsevier
grade
Preferred source (of 2)‎

Summing over trajectories of stochastic dynamics with multiplicative noise

2014 | Journal article
DOI:

10.1063/1.4890968

EID:

2-s2.0-84905660138

Contributors: Tang, Y.; Yuan, R.; Ao, P.
Source: Self-asserted source
Ruoshi Yuan via Scopus - Elsevier

Two programmed replicative lifespans of Saccharomyces cerevisiae formed by the endogenous molecular-cellular network

2014 | Journal article
DOI:

10.1016/j.jtbi.2014.01.007

EID:

2-s2.0-84921890025

Contributors: Hu, J.; Zhu, X.; Wang, X.; Yuan, R.; Zheng, W.; Xu, M.; Ao, P.
Source: Self-asserted source
Ruoshi Yuan via Scopus - Elsevier

Nonequilibrium work relation beyond the Boltzmann-Gibbs distribution

Physical Review E
2014-06-09 | Journal article
Contributors: Ying Tang; Ruoshi Yuan; Ping Ao
Source: Self-asserted source
Ruoshi Yuan via Crossref Metadata Search

A new numerical method to construct global lyapunov function for complex attractors

2013 | Conference paper
EID:

2-s2.0-84890513337

Contributors: Wang, X.; Yuan, R.; Yuan, B.; Ao, P.
Source: Self-asserted source
Ruoshi Yuan via Scopus - Elsevier

Decomposition scheme in continuous dissipative chaotic systems and role of strange attractors

2013 22nd International Conference on Noise and Fluctuations (ICNF)
2013-06 | Conference paper
Contributors: Yian Ma; Qijun Tan; Ruoshi Yuan; Bo Yuan; Ping Ao
Source: Self-asserted source
Ruoshi Yuan via Crossref Metadata Search

Mapping noise disturbed oscillators onto quasi-symplectic dynamics

2013 22nd International Conference on Noise and Fluctuations (ICNF)
2013-06 | Conference paper
Contributors: Ruoshi Yuan; Ping Ao
Source: Self-asserted source
Ruoshi Yuan via Crossref Metadata Search

Exploring a noisy van der Pol type oscillator with a stochastic approach

Physical Review E
2013-06-07 | Journal article
Contributors: Ruoshi Yuan; Xinan Wang; Yian Ma; Bo Yuan; Ping Ao
Source: Self-asserted source
Ruoshi Yuan via Crossref Metadata Search

Dynamical behaviors determined by the Lyapunov function in competitive Lotka-Volterra systems

Physical Review E
2013-01 | Journal article
Contributors: Ying Tang; Ruoshi Yuan; Yian Ma
Source: Self-asserted source
Ruoshi Yuan via Crossref Metadata Search

Beyond Itô versus Stratonovich

2012 | Journal article
DOI:

10.1088/1742-5468/2012/07/P07010

EID:

2-s2.0-84864415377

Contributors: Yuan, R.; Ao, P.
Source: Self-asserted source
Ruoshi Yuan via Scopus - Elsevier

Relation of a New Interpretation of Stochastic Differential Equations to Ito Process

2012 | Journal article
DOI:

10.1007/s10955-012-0532-8

EID:

2-s2.0-84865405760

Contributors: Shi, J.; Chen, T.; Yuan, R.; Yuan, B.; Ao, P.
Source: Self-asserted source
Ruoshi Yuan via Scopus - Elsevier

Potential function in dynamical systems and the relation with Lyapunov function

2011 | Conference paper
EID:

2-s2.0-80053091079

Contributors: Yuan, R.; Ma, Y.; Yuan, B.; Ao, P.
Source: Self-asserted source
Ruoshi Yuan via Scopus - Elsevier

Exploring a minimal two-component p53 model

2010 | Journal article
DOI:

10.1088/1478-3975/7/3/036008

EID:

2-s2.0-78349297886

Contributors: Sun, T.; Yuan, R.; Xu, W.; Zhu, F.; Shen, P.
Source: Self-asserted source
Ruoshi Yuan via Scopus - Elsevier