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Works (13)

Protein binding sites for drug design

Biophysical Reviews
2022-12 | Journal article
DOI: 10.1007/s12551-022-01028-3
Contributors: Janez Konc; Dušanka Janežič
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ProBiS-Fold Approach for Annotation of Human Structures from the AlphaFold Database with No Corresponding Structure in the PDB to Discover New Druggable Binding Sites

Journal of Chemical Information and Modeling
2022-11-28 | Journal article
DOI: 10.1021/acs.jcim.2c00947
Contributors: Janez Konc; Dušanka Janežič
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ProBiS-Dock: A Hybrid Multitemplate Homology Flexible Docking Algorithm Enabled by Protein Binding Site Comparison

Journal of Chemical Information and Modeling
2022-03-28 | Journal article
DOI: 10.1021/acs.jcim.1c01176
Contributors: Janez Konc; Samo Lešnik; Blaž Škrlj; Matej Sova; Matic Proj; Damijan Knez; Stanislav Gobec; Dušanka Janežič
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Deep node ranking for neuro‐symbolic structural node embedding and classification

International Journal of Intelligent Systems
2022-01 | Journal article
DOI: 10.1002/int.22651
Contributors: Blaž Škrlj; Jan Kralj; Janez Konc; Marko Robnik‐Šikonja; Nada Lavrač
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Exact Maximum Clique Algorithm for Different Graph Types Using Machine Learning

Mathematics
2021-12-28 | Journal article
DOI: 10.3390/math10010097
Contributors: Kristjan Reba; Matej Guid; Kati Rozman; Dušanka Janežič; Janez Konc
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ProBiS-Dock Database: A Web Server and Interactive Web Repository of Small Ligand–Protein Binding Sites for Drug Design

Journal of Chemical Information and Modeling
2021-08-23 | Journal article
DOI: 10.1021/acs.jcim.1c00454
Contributors: Janez Konc; Samo Lešnik; Blaž Škrlj; Dušanka Janežič
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CaNDis: a web server for investigation of causal relationships between diseases, drugs and drug targets

Bioinformatics
2021-05-05 | Journal article
DOI: 10.1093/bioinformatics/btaa762
Contributors: Blaž Škrlj; Nika Eržen; Nada Lavrač; Tanja Kunej; Janez Konc; Lenore Cowen
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Mechanistic Insights into Side Effects of Troglitazone and Rosiglitazone Using a Novel Inverse Molecular Docking Protocol

Pharmaceutics
2021-02-28 | Journal article
DOI: 10.3390/pharmaceutics13030315
Contributors: Katarina Kores; Janez Konc; Urban Bren
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Loop Grafting between Similar Local Environments for Fc-Silent Antibodies

Journal of Chemical Information and Modeling
2020-11-23 | Journal article
DOI: 10.1021/acs.jcim.9b01198
Contributors: Samo Lešnik; Milan Hodošček; Barbara Podobnik; Janez Konc
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ProBiS H2O MD Approach for Identification of Conserved Water Sites in Protein Structures for Drug Design

ACS Medicinal Chemistry Letters
2020-05-14 | Journal article
DOI: 10.1021/acsmedchemlett.9b00651
Contributors: Marko Jukič; Janez Konc; Dušanka Janežič; Urban Bren
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CANDOCK: Chemical Atomic Network-Based Hierarchical Flexible Docking Algorithm Using Generalized Statistical Potentials

Journal of Chemical Information and Modeling
2020-03-23 | Journal article
DOI: 10.1021/acs.jcim.9b00686
Contributors: Jonathan Fine; Janez Konc; Ram Samudrala; Gaurav Chopra
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Binding site comparisons for target-centered drug discovery

Expert Opinion on Drug Discovery
2019-05-04 | Journal article
DOI: 10.1080/17460441.2019.1588883
Contributors: Janez Konc
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Inverse Molecular Docking as a Novel Approach to Study Anticarcinogenic and Anti-Neuroinflammatory Effects of Curcumin

Molecules
2018-12-18 | Journal article
DOI: 10.3390/molecules23123351
Contributors: Veronika Furlan; Janez Konc; Urban Bren
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Peer review (41 reviews for 6 publications/grants)

Review activity for ACS omega. (2)
Review activity for Communications biology. (1)
Review activity for Journal of chemical information and modeling. (28)
Review activity for Journal of medicinal chemistry. (7)
Review activity for Molecular pharmaceutics. (2)
Review activity for Nature communications (1)
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