Personal information

Emails & domains

Verified email domains

Other IDs

Scopus Author ID: 57202231284

Activities

Collapse all

Works (20)

Harnessing Protein Language Model for Structure-Based Discovery of Highly Efficient and Robust PET Hydrolases

2024-12-16 | Preprint
DOI: 10.21203/rs.3.rs-5492523/v1
Contributors: Lirong Zheng; Banghao Wu; Bozitao Zhong; Runye Huang; Shifeng Jiang; Mingchen Li; Pan Tan; Liang Hong
Source: check_circle
Crossref

A general Temperature-Guided Language model to design proteins of enhanced Stability and Activity

Science Advances
2024-11-27 | Journal article | Author
DOI: 10.1126/sciadv.adr2641
Contributors: Yan Feng; Guang-Yu Yang; Yufeng Pei; Qian Liu; Wanli Ouyang; Yuanxi Yu; Xinyu Sun; Zhiqiang Hu; Guisheng Fan; Liang Zhang et al.
Source: check_circle
AAAS - Science

Erratum: “A random batch Ewald method for charged particles in the isothermal–isobaric ensemble” [J. Chem. Phys. 157, 144102 (2022)]

The Journal of Chemical Physics
2024-11-14 | Journal article
DOI: 10.1063/5.0245101
Contributors: Jiuyang Liang; Pan Tan; Liang Hong; Shi Jin; Zhenli Xu; Lei Li
Source: check_circle
Crossref

Simple, Efficient, and Scalable Structure-Aware Adapter Boosts Protein Language Models

Journal of Chemical Information and Modeling
2024-08-26 | Journal article
DOI: 10.1021/acs.jcim.4c00689
Contributors: Yang Tan; Mingchen Li; Bingxin Zhou; Bozitao Zhong; Lirong Zheng; Pan Tan; Ziyi Zhou; Huiqun Yu; Guisheng Fan; Liang Hong
Source: check_circle
Crossref

Enhancing efficiency of protein language models with minimal wet-lab data through few-shot learning

Nature Communications
2024-07-02 | Journal article
DOI: 10.1038/s41467-024-49798-6
Contributors: Ziyi Zhou; Liang Zhang; Yuanxi Yu; Banghao Wu; Mingchen Li; Liang Hong; Pan Tan
Source: check_circle
Crossref

ProSST: Protein Language Modeling with Quantized Structure and Disentangled Attention

2024-04-17 | Preprint
DOI: 10.1101/2024.04.15.589672
Contributors: Mingchen Li; Pan Tan; Xinzhu Ma; Bozitao Zhong; Huiqun Yu; Ziyi Zhou; Wanli Ouyang; Bingxin Zhou; Liang Hong; Yang Tan
Source: check_circle
Crossref

SESNet: sequence-structure feature-integrated deep learning method for data-efficient protein engineering

Journal of Cheminformatics
2023-02-03 | Journal article
DOI: 10.1186/s13321-023-00688-x
Part of ISSN: 1758-2946
Contributors: Mingchen Li; Liqi Kang; Yi Xiong; Yu Guang Wang; Guisheng Fan; Pan Tan; Liang Hong
Source: Self-asserted source
Pan Tan

Proteome-wide 3D structure prediction provides insights into the ancestral metabolism of ancient archaea and bacteria

Nature Communications
2022-12-21 | Journal article
DOI: 10.1038/s41467-022-35523-8
Contributors: Weishu Zhao; Bozitao Zhong; Lirong Zheng; Pan Tan; Yinzhao Wang; Hao Leng; Nicolas de Souza; Zhuo Liu; Liang Hong; Xiang Xiao
Source: check_circle
Crossref

A random batch Ewald method for charged particles in the isothermal–isobaric ensemble

The Journal of Chemical Physics
2022-10-14 | Journal article
DOI: 10.1063/5.0107140
Contributors: Jiuyang Liang; Pan Tan; Liang Hong; Shi Jin; Zhenli Xu; Lei Li
Source: check_circle
Crossref

Superscalability of the random batch Ewald method

The Journal of Chemical Physics
2022-01-07 | Journal article
DOI: 10.1063/5.0073424
Contributors: Jiuyang Liang; Pan Tan; Yue Zhao; Lei Li; Shi Jin; Liang Hong; Zhenli Xu
Source: check_circle
Crossref

Solid-Like Nano-Anion Cluster Constructs a Free Lithium-Ion-Conducting Superfluid Framework in a Water-in-Salt Electrolyte

The Journal of Physical Chemistry C
2021-06-10 | Journal article
DOI: 10.1021/acs.jpcc.1c01663
Contributors: Pan Tan; Jinming Yue; Yuanxi Yu; Binghang Liu; Tao Liu; Lirong Zheng; Lunhua He; Xiaohua Zhang; Liumin Suo; Liang Hong
Source: check_circle
Crossref

Decoupling between the translation and rotation of water in the proximity of a protein molecule

Physical Chemistry Chemical Physics
2020 | Journal article
DOI: 10.1039/d0cp02416c
Part of ISSN: 1463-9076
Part of ISSN: 1463-9084
Source: Self-asserted source
Pan Tan
grade
Preferred source (of 2)‎

Differences between calcium rich and depleted alpha-lactalbumin investigated by molecular dynamics simulations and incoherent neutron scattering

Physical Review E
2020 | Journal article
DOI: 10.1103/PhysRevE.101.032415
EID:

2-s2.0-85083407444

Part of ISBN:

24700053 24700045
Contributors: Zeller, D.; Tan, P.; Hong, L.; Di Bari, D.; Garcia Sakai, V.; Peters, J.
Source: Self-asserted source
Pan Tan via Scopus - Elsevier
grade
Preferred source (of 2)‎

Structural analysis of An<inf>l</inf>-cysteine desulfurase from an SSP dna phosphorothioation system

mBio
2020 | Journal article
DOI: 10.1128/mBio.00488-20
EID:

2-s2.0-85084170222

Part of ISBN:

21507511 21612129
Contributors: Liu, L.; Jiang, S.; Xing, M.; Chen, C.; Lai, C.; Li, N.; Liu, G.; Wu, D.; Gao, H.; Hong, L. et al.
Source: Self-asserted source
Pan Tan via Scopus - Elsevier

Anomalous sub-diffusion of water in biosystems: From hydrated protein powders to concentrated protein solution to living cells

Structural Dynamics
2020-09 | Journal article
DOI: 10.1063/4.0000036
Contributors: Rui Li; Zhuo Liu; Like Li; Juan Huang; Takeshi Yamada; Victoria García Sakai; Pan Tan; Liang Hong
Source: check_circle
Crossref

One-dimensional nature of protein low-energy vibrations

Physical Review Research
2020-08-27 | Journal article
DOI: 10.1103/PhysRevResearch.2.032050
Contributors: Minhao Yu; Pan Tan; Yiyang Ye; David J. Voneshen; Xiangjun Xing; Liang Hong
Source: check_circle
Crossref

How BamA recruits OMP substrates via poly-POTRAs domain

FASEB journal : official publication of the Federation of American Societies for Experimental Biology
2019 | Journal article
DOI: 10.1096/fj.201900681RR
EID:

2-s2.0-85076197886

Part of ISBN:

15306860
Contributors: Ma, X.; Wang, Q.; Li, Y.; Tan, P.; Wu, H.; Wang, P.; Dong, X.; Hong, L.; Meng, G.
Source: Self-asserted source
Pan Tan via Scopus - Elsevier

Statistical properties for diffusive motion of hydration water on protein surface

Physica B: Condensed Matter
2019 | Journal article
DOI: 10.1016/j.physb.2019.01.004
EID:

2-s2.0-85063115351

Part of ISBN:

09214526
Contributors: Tan, P.; Li, J.; Hong, L.
Source: Self-asserted source
Pan Tan via Scopus - Elsevier

Dynamic Neutron Scattering by Biological Systems

Annual Review of Biophysics
2018 | Book
DOI: 10.1146/annurev-biophys-070317-033358
EID:

2-s2.0-85047556701

Part of ISBN:

19361238 1936122X
Contributors: Smith, J.C.; Tan, P.; Petridis, L.; Hong, L.
Source: Self-asserted source
Pan Tan via Scopus - Elsevier

Gradual Crossover from Subdiffusion to Normal Diffusion: A Many-Body Effect in Protein Surface Water

Physical Review Letters
2018 | Journal article
DOI: 10.1103/PhysRevLett.120.248101
EID:

2-s2.0-85048522874

Part of ISBN:

10797114 00319007
Contributors: Tan, P.; Liang, Y.; Xu, Q.; Mamontov, E.; Li, J.; Xing, X.; Hong, L.
Source: Self-asserted source
Pan Tan via Scopus - Elsevier
How many people are using ORCID?