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Works (21)

Gene variants of coagulation related proteins that interact with SARS-CoV-2

PLOS Computational Biology
2021-03-17 | Journal article
Contributors: David Holcomb; James M. Briggs; Aikaterini Alexaki; Nancy Hernandez; Ryan Hunt; Kyle Laurie; Jacob Kames; Nobuko Hamasaki-Katagiri; Anton A. Komar; Michael DiCuccio et al.
Source: check_circle
Crossref

Immunogenicity of Protein Therapeutics: A Lymph Node Perspective

Frontiers in Immunology
2020 | Journal article
EID:

2-s2.0-85085490973

Part of ISBN:

16643224

Contributors: Fu, K.; March, K.; Alexaki, A.; Fabozzi, G.; Moysi, E.; Petrovas, C.
Source: Self-asserted source
Aikaterini Alexaki via Scopus - Elsevier

TissueCoCoPUTs: Novel Human Tissue-Specific Codon and Codon-Pair Usage Tables Based on Differential Tissue Gene Expression

Journal of Molecular Biology
2020 | Journal article
EID:

2-s2.0-85078914512

Part of ISBN:

10898638 00222836

Contributors: Kames, J.; Alexaki, A.; Holcomb, D.D.; Santana-Quintero, L.V.; Athey, J.C.; Hamasaki-Katagiri, N.; Katneni, U.; Golikov, A.; Ibla, J.C.; Bar, H. et al.
Source: Self-asserted source
Aikaterini Alexaki via Scopus - Elsevier

Codon and Codon-Pair Usage Tables (CoCoPUTs): Facilitating Genetic Variation Analyses and Recombinant Gene Design

Journal of Molecular Biology
2019 | Journal article
EID:

2-s2.0-85065099709

Part of ISBN:

10898638 00222836

Contributors: Alexaki, A.; Kames, J.; Holcomb, D.D.; Athey, J.; Santana-Quintero, L.V.; Lam, P.V.N.; Hamasaki-Katagiri, N.; Osipova, E.; Simonyan, V.; Bar, H. et al.
Source: Self-asserted source
Aikaterini Alexaki via Scopus - Elsevier

Effects of codon optimization on coagulation factor IX translation and structure: Implications for protein and gene therapies

Scientific Reports
2019 | Journal article
EID:

2-s2.0-85074279891

Part of ISBN:

20452322

Contributors: Alexaki, A.; Hettiarachchi, G.K.; Athey, J.C.; Katneni, U.K.; Simhadri, V.; Hamasaki-Katagiri, N.; Nanavaty, P.; Lin, B.; Takeda, K.; Freedberg, D. et al.
Source: Self-asserted source
Aikaterini Alexaki via Scopus - Elsevier

The Kazusa codon usage database, CoCoPUTs, and the value of up-to-date codon usage statistics

Infection, Genetics and Evolution
2019 | Journal article
EID:

2-s2.0-85065837926

Part of ISBN:

15677257 15671348

Contributors: Holcomb, D.D.; Alexaki, A.; Katneni, U.; Kimchi-Sarfaty, C.
Source: Self-asserted source
Aikaterini Alexaki via Scopus - Elsevier

A new and updated resource for codon usage tables

BMC Bioinformatics
2017 | Journal article
EID:

2-s2.0-85028635262

Part of ISBN:

14712105

Contributors: Athey, J.; Alexaki, A.; Osipova, E.; Rostovtsev, A.; Santana-Quintero, L.V.; Katneni, U.; Simonyan, V.; Kimchi-Sarfaty, C.
Source: Self-asserted source
Aikaterini Alexaki via Scopus - Elsevier

De novo sphingolipid biosynthesis is required for adipocyte survival and metabolic homeostasis

Journal of Biological Chemistry
2017 | Journal article
EID:

2-s2.0-85014531534

Part of ISBN:

1083351X 00219258

Contributors: Alexaki, A.; Clarke, B.A.; Gavrilova, O.; Ma, Y.; Zhu, H.; Ma, X.; Xu, L.; Tuymetova, G.; Larman, B.C.; Allende, M.L. et al.
Source: Self-asserted source
Aikaterini Alexaki via Scopus - Elsevier

Functional Studies of CCAAT/Enhancer Binding Protein Site Located Downstream of the Transcriptional Start Site

Clinical Medicine Insights: Pathology
2017 | Journal article
EID:

2-s2.0-85044505420

Part of ISBN:

11795557

Contributors: Liu, Y.; Nonnemacher, M.R.; Alexaki, A.; Pirrone, V.; Banerjee, A.; Li, L.; Kilareski, E.; Wigdahl, B.
Source: Self-asserted source
Aikaterini Alexaki via Scopus - Elsevier

Recent advances in (therapeutic protein) drug development

F1000Research
2017 | Journal article
EID:

2-s2.0-85013746070

Part of ISBN:

1759796X 20461402

Contributors: Sauna, Z.E.; Lagassé, H.A.D.; Alexaki, A.; Simhadri, V.L.; Katagiri, N.H.; Jankowski, W.; Kimchi-Sarfaty, C.
Source: Self-asserted source
Aikaterini Alexaki via Scopus - Elsevier

Expression of the ORMDLS, modulators of serine palmitoyltransferase, is regulated by sphingolipids in mammalian cells

Journal of Biological Chemistry
2015 | Journal article
EID:

2-s2.0-84920676629

Part of ISBN:

1083351X 00219258

Contributors: Gupta, S.D.; Gable, K.; Alexaki, A.; Chandris, P.; Proia, R.L.; Dunn, T.M.; Harmon, J.M.
Source: Self-asserted source
Aikaterini Alexaki via Scopus - Elsevier

Impact of Viral Activators and Epigenetic Regulators on HIV-1 LTRs Containing Naturally Occurring Single Nucleotide Polymorphisms

BioMed Research International
2015 | Journal article
Contributors: Sonia Shah; Vanessa Pirrone; Aikaterini Alexaki; Michael R. Nonnemacher; Brian Wigdahl
Source: check_circle
Crossref
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Preferred source (of 2)‎

Autophagy regulates sphingolipid levels in the liver

Journal of Lipid Research
2014 | Journal article
EID:

2-s2.0-84919781522

Part of ISBN:

15397262 00222275

Contributors: Alexaki, A.; Gupta, S.D.; Majumder, S.; Kono, M.; Tuymetova, G.; Harmon, J.M.; Dunn, T.M.; Proia, R.L.
Source: Self-asserted source
Aikaterini Alexaki via Scopus - Elsevier

Effect of μ-opioid agonist DAMGO on surface CXCR4 and HIV-1 replication in TF-1 human bone marrow progenitor cells

BMC Research Notes
2014 | Journal article
EID:

2-s2.0-84989184444

Part of ISBN:

17560500

Contributors: Strazza, M.; Banerjee, A.; Alexaki, A.; Passic, S.R.; Meucci, O.; Pirrone, V.; Wigdahl, B.; Nonnemacher, M.R.
Source: Self-asserted source
Aikaterini Alexaki via Scopus - Elsevier

Functional properties of the HIV-1 long terminal repeat containing single-nucleotide polymorphisms in Sp site III and CCAAT/enhancer binding protein site i

Virology Journal
2014 | Journal article
EID:

2-s2.0-84902143618

Part of ISBN:

1743422X

Contributors: Shah, S.; Alexaki, A.; Pirrone, V.; Dahiya, S.; Nonnemacher, M.R.; Wigdahl, B.
Source: Self-asserted source
Aikaterini Alexaki via Scopus - Elsevier

Biology Revealed by Sphingosine 1-Phosphate (S1P) Receptor Gene-Altered Mice

Lysophospholipid Receptors: Signaling and Biochemistry
2013 | Book
EID:

2-s2.0-84886520720

Contributors: Allende, M.L.; Kono, M.; Alexaki, A.; Giannouli, C.; Kang, J.; Theisen, C.C.; Koerner, E.L.; Proia, R.L.
Source: Self-asserted source
Aikaterini Alexaki via Scopus - Elsevier

Cellular reservoirs of HIV-1 and their role in viral persistence

Current HIV Research
2008 | Journal article
EID:

2-s2.0-53849134844

Part of ISBN:

1570162X

Contributors: Alexaki, A.; Liu, Y.; Wigdahl, B.
Source: Self-asserted source
Aikaterini Alexaki via Scopus - Elsevier

HIV-1 infection of bone marrow hematopoietic progenitor cells and their role in trafficking and viral dissemination

PLoS Pathogens
2008 | Journal article
EID:

2-s2.0-58149261687

Part of ISBN:

15537366 15537374

Contributors: Alexaki, A.; Wigdahl, B.
Source: Self-asserted source
Aikaterini Alexaki via Scopus - Elsevier

PMA-induced differentiation of a bone marrow progenitor cell line activates HIV-1 LTR-driven transcription

DNA and Cell Biology
2007 | Journal article
EID:

2-s2.0-34250878430

Part of ISBN:

10445498

Contributors: Alexaki, A.; Quiterio, S.J.; Liu, Y.; Irish, B.; Kilareski, E.; Nonnemacher, M.R.; Wigdahl, B.
Source: Self-asserted source
Aikaterini Alexaki via Scopus - Elsevier

AP-1-directed human T cell leukemia virus type 1 viral gene expression during monocytic differentiation

Journal of Leukocyte Biology
2006 | Journal article
EID:

2-s2.0-33751550701

Part of ISBN:

07415400

Contributors: Grant, C.; Jain, P.; Nonnemacher, M.; Flaig, K.E.; Irish, B.; Ahuja, J.; Alexaki, A.; Alefantis, T.; Wigdahl, B.
Source: Self-asserted source
Aikaterini Alexaki via Scopus - Elsevier

Hamsters Fed Diets High in Saturated Fat Have Increased Cholesterol Accumulation and Cytokine Production in the Aortic Arch Compared with Cholesterol-Fed Hamsters with Moderately Elevated Plasma Non-HDL Cholesterol Concentrations

Journal of Nutrition
2004 | Journal article
EID:

2-s2.0-0942290531

Part of ISBN:

00223166

Contributors: Alexaki, A.; Wilson, T.A.; Atallah, M.T.; Handelman, G.; Nicolosi, R.J.
Source: Self-asserted source
Aikaterini Alexaki via Scopus - Elsevier