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Employment (6)

Aurlide ltd.: Turku, FI

2023-01 to present | Manager of Molecular Discovery
Employment
Source: Self-asserted source
Sami Kurkinen

University of Turku: Turku, FI

2022-03 to 2022-12 | Senior researcher (Faculty of Medicine)
Employment
Source: Self-asserted source
Sami Kurkinen

University of Turku: Turku, FI

2021-11 to 2022-02 | Project Researcher (Faculty of Medicine)
Employment
Source: Self-asserted source
Sami Kurkinen

University of Turku: Turku, FI

2018 to 2021-11 | Phd student (Faculty of Medicine)
Employment
Source: Self-asserted source
Sami Kurkinen

Aurlide ltd: Turku, FI

2020 to 2021 | Part-time consultant
Employment
Source: Self-asserted source
Sami Kurkinen

University of Jyväskylä: Jyväskylä, FI

2017-02 to 2018-08 | Project Researcher (The Department of Biological and Environmental Science)
Employment
Source: Self-asserted source
Sami Kurkinen

Education and qualifications (1)

University of Turku: Turku, FI

2018 to 2021 | Doctor of Philosophy (Faculty of Medicine)
Education
Source: Self-asserted source
Sami Kurkinen

Works (11)

Virtual Screening Strategy to Identify Retinoic Acid-Related Orphan Receptor γt Modulators

Molecules
2023-04-13 | Journal article
DOI: 10.3390/molecules28083420
Contributors: Elmeri M. Jokinen; Miika Niemeläinen; Sami T. Kurkinen; Jukka V. Lehtonen; Sakari Lätti; Pekka A. Postila; Olli T. Pentikäinen; Sanna P. Niinivehmas
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Conserved histidine and tyrosine determine spectral responses through the water network in Deinococcus radiodurans phytochrome

Photochemical & Photobiological Sciences
2022-07-29 | Journal article
DOI: 10.1007/s43630-022-00272-6
Contributors: Heli Lehtivuori; Jessica Rumfeldt; Satu Mustalahti; Sami Kurkinen; Heikki Takala
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Crossref

Ligand-Enhanced Negative Images Optimized for Docking Rescoring

International Journal of Molecular Sciences
2022-07-17 | Journal article
DOI: 10.3390/ijms23147871
Contributors: Sami T. Kurkinen; Jukka V. Lehtonen; Olli T. Pentikäinen; Pekka A. Postila
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Optimization of Cavity-Based Negative Images to Boost Docking Enrichment in Virtual Screening

Journal of Chemical Information and Modeling
2022-02-28 | Journal article
DOI: 10.1021/acs.jcim.1c01145
Contributors: Sami T. Kurkinen; Jukka V. Lehtonen; Olli T. Pentikäinen; Pekka A. Postila
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Crossref

Detection of binding sites on SARS-CoV-2 Spike protein receptor-binding domain by molecular dynamics simulations in mixed solvents.

IEEE/ACM transactions on computational biology and bioinformatics
2021-04-29 | Journal article
DOI: 10.1109/tcbb.2021.3076259
PMID: 33914685
Source: Self-asserted source
Sami Kurkinen

Negative Image-Based Screening: Rigid Docking Using Cavity Information

Protein-Ligand Interactions and Drug Design
2021-03-24 | Book chapter
Source: Self-asserted source
Sami Kurkinen

Inhibition of Pneumolysin Cytotoxicity by Hydrolysable Tannins

Antibiotics
2020-12-21 | Journal article
DOI: 10.3390/antibiotics9120930
Part of ISSN: 2079-6382
Source: Self-asserted source
Sami Kurkinen

Screening of Natural Products Targeting SARS-CoV-2–ACE2 Receptor Interface – A MixMD Based HTVS Pipeline

Frontiers in Chemistry
2020-11-19 | Journal article
DOI: 10.3389/fchem.2020.589769
Part of ISSN: 2296-2646
Source: Self-asserted source
Sami Kurkinen

Getting Docking into Shape Using Negative Image-Based Rescoring

Journal of Chemical Information and Modeling
2019-08-26 | Journal article
DOI: 10.1021/acs.jcim.9b00383
Part of ISSN: 1549-9596
Part of ISSN: 1549-960X
Source: Self-asserted source
Sami Kurkinen

A Practical Perspective: The Effect of Ligand Conformers on the Negative Image-Based Screening

International Journal of Molecular Sciences
2019-06-06 | Journal article
DOI: 10.3390/ijms20112779
Part of ISSN: 1422-0067
Source: Self-asserted source
Sami Kurkinen

Improving Docking Performance Using Negative Image-Based Rescoring

Frontiers in Pharmacology
2018-03-26 | Journal article
DOI: 10.3389/fphar.2018.00260
Part of ISSN: 1663-9812
Source: Self-asserted source
Sami Kurkinen

Peer review (1 review for 1 publication/grant)

Review activity for Nature machine intelligence. (1)
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