Personal information

No personal information available

Activities

Collapse all

Works (18)

OmicNavigator: open-source software for the exploration, visualization, and archival of omic studies.

BMC bioinformatics
2024-04-24 | Journal article
DOI: 10.1186/s12859-024-05743-4
PMID: 38658834
PMC: PMC11040775
Contributors: Ernst TR; Blischak JD; Nordlund P; Dalen J; Moore J; Bhamidipati A; Dwivedi P; LoGrasso J; Curado MR; Engelmann BW
Source: Self-asserted source
John Blischak

Characterizing and inferring quantitative cell cycle phase in single-cell RNA-seq data analysis

Genome Research
2020-04-20 | Journal article
DOI: 10.1101/gr.247759.118
Contributors: Chiaowen Joyce Hsiao; PoYuan Tung; John D. Blischak; Jonathan E. Burnett; Kenneth A. Barr; Kushal K. Dey; Matthew Stephens; Yoav Gilad
Source: check_circle
Crossref

Creating and sharing reproducible research code the workflowr way

F1000Research
2019-10-14 | Journal article
DOI: 10.12688/f1000research.20843.1
Contributors: John D. Blischak; Peter Carbonetto; Matthew Stephens
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Discovery and characterization of variance QTLs in human induced pluripotent stem cells

PLOS Genetics
2019-04-19 | Journal article
DOI: 10.1371/journal.pgen.1008045
Contributors: Abhishek K. Sarkar; Chris Cotsapas; Po-Yuan Tung; John D. Blischak; Jonathan E. Burnett; Yang I. Li; Matthew Stephens; Yoav Gilad
Source: check_circle
Crossref

Characterizing and inferring quantitative cell cycle phase in single-cell RNA-seq data analysis

2019-02-03 | Other
DOI: 10.1101/526848
Contributors: Chiaowen Joyce Hsiao; PoYuan Tung; John D. Blischak; Jonathan E. Burnett; Kenneth A. Barr; Kushal K. Dey; Matthew Stephens; Yoav Gilad
Source: check_circle
Crossref

A Methodological Assessment and Characterization of Genetically-Driven Variation in Three Human Phosphoproteomes

Scientific Reports
2018-08-14 | Journal article
DOI: 10.1038/s41598-018-30587-3
Contributors: Brett W. Engelmann; Chiaowen Joyce Hsiao; John D. Blischak; Yannick Fourne; Zia Khan; Michael Ford; Yoav Gilad
Source: check_circle
Crossref

Determining the genetic basis of anthracycline-cardiotoxicity by molecular response QTL mapping in induced cardiomyocytes

eLife
2018-05-08 | Journal article
DOI: 10.7554/eLife.33480
Contributors: David A Knowles; Courtney K Burrows; John D Blischak; Kristen M Patterson; Daniel J Serie; Nadine Norton; Carole Ober; Jonathan K Pritchard; Yoav Gilad
Source: check_circle
Crossref

A Methodological Assessment and Characterization of Genetically-Driven Variation in Three Human Phosphoproteomes

2018-02-26 | Other
DOI: 10.1101/271650
Contributors: Brett W. Engelmann; Chiaowen Joyce Hsiao; John D. Blischak; Yannick Fourne; Michael Ford; Yoav Gilad
Source: check_circle
Crossref

Determining the genetic basis of anthracycline-cardiotoxicity by molecular response QTL mapping in induced cardiomyocytes

2017-11-01 | Other
DOI: 10.1101/212381
Contributors: David A Knowles; Courtney K Burrows; John D Blischak; Kristen M Patterson; Carole Ober; Jonathan K Pritchard; Yoav Gilad
Source: check_circle
Crossref

Predicting susceptibility to tuberculosis based on gene expression profiling in dendritic cells

Scientific Reports
2017-07-18 | Journal article
DOI: 10.1038/s41598-017-05878-w
Contributors: John D. Blischak; Ludovic Tailleux; Marsha Myrthil; Cécile Charlois; Emmanuel Bergot; Aurélien Dinh; Gloria Morizot; Olivia Chény; Cassandre Von Platen; Jean-Louis Herrmann et al.
Source: check_circle
Crossref

Predicting susceptibility to tuberculosis based on gene expression profiling in dendritic cells

2017-02-03 | Preprint
DOI: 10.1101/104729
Contributors: John D. Blischak; Ludovic Tailleux; Marsha Myrthil; Cécile Charlois; Emmanuel Bergot; Aurélien Dinh; Gloria Morizot; Olivia Chény; Cassandre Von Platen; Jean-Louis Herrmann et al.
Source: check_circle
Crossref

Batch effects and the effective design of single-cell gene expression studies

Scientific Reports
2017-01-03 | Journal article
DOI: 10.1038/srep39921
Contributors: Po-Yuan Tung; John D. Blischak; Chiaowen Joyce Hsiao; David A. Knowles; Jonathan E. Burnett; Jonathan K. Pritchard; Yoav Gilad
Source: Self-asserted source
John Blischak via Crossref Metadata Search

Batch effects and the effective design of single-cell gene expression studies

2016-07-08 | Preprint
DOI: 10.1101/062919
Contributors: Po-Yuan Tung; John D. Blischak; Chiaowen Joyce Hsiao; David A. Knowles; Jonathan E. Burnett; Jonathan K. Pritchard; Yoav Gilad
Source: check_circle
Crossref

Patterns of Transcriptional Response to 1,25-Dihydroxyvitamin D3 and Bacterial Lipopolysaccharide in Primary Human Monocytes

G3: Genes|Genomes|Genetics
2016-03 | Journal article
DOI: 10.1534/g3.116.028712
Contributors: Silvia N. Kariuki; John D. Blischak; Shigeki Nakagome; David B. Witonsky; Anna Di Rienzo
Source: Self-asserted source
John Blischak via Crossref Metadata Search

A Quick Introduction to Version Control with Git and GitHub

PLOS Computational Biology
2016-01 | Journal article
DOI: 10.1371/journal.pcbi.1004668
Contributors: John D. Blischak; Emily R. Davenport; Greg Wilson; Francis Ouellette
Source: Self-asserted source
John Blischak via Crossref Metadata Search

Mycobacterial infection induces a specific human innate immune response

Scientific Reports
2015-11 | Journal article
DOI: 10.1038/srep16882
Contributors: John D. Blischak; Ludovic Tailleux; Amy Mitrano; Luis B. Barreiro; Yoav Gilad
Source: Self-asserted source
John Blischak via Crossref Metadata Search

Methylation QTLs Are Associated with Coordinated Changes in Transcription Factor Binding, Histone Modifications, and Gene Expression Levels

PLoS Genetics
2014-09 | Journal article
DOI: 10.1371/journal.pgen.1004663
Contributors: Nicholas E. Banovich; Xun Lan; Graham McVicker; Bryce van de Geijn; Jacob F. Degner; John D. Blischak; Julien Roux; Jonathan K. Pritchard; Yoav Gilad; Timothy E. Reddy
Source: Self-asserted source
John Blischak via Crossref Metadata Search

The Laron Mouse

Laron Syndrome - From Man to Mouse
2010-10 | Other
DOI: 10.1007/978-3-642-11183-9_49
Contributors: John J. Kopchick; John D. Blischak
Source: Self-asserted source
John Blischak via Crossref Metadata Search
How many people are using ORCID?