Personal information

Activities

Employment (1)

Lincoln University: Christchurch, NZ

1991 to present | Professor (Faculty of Environment, Society and Design)
Employment
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Lincoln University

Education and qualifications (1)

Virginia Tech: Blacksburg, Virginia, US

1987 to 1991 | PhD (Engineering); MS(Engineering) (Department of Sustainable Biomaterials)
Education
Source: Self-asserted source
sandhya samarasinghe

Works (50 of 200)

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Page 1 of 4

Proteins as fuzzy controllers: Auto tuning a biological fuzzy inference system to predict protein dynamics in complex biological networks

Biosystems
2023-02 | Journal article
Contributors: Mohammad Abdallah Alsharaiah; Sandhya Samarasinghe; Don Kulasiri
Source: check_circle
Crossref

A Comprehensive conceptual and computational dynamics framework for autonomous regeneration of form and function in biological organisms

PNAS Nexus
2023-02-03 | Journal article
Contributors: Sandhya Samarasinghe; Tran Nguyen Minh-Thai; Shibu Yooseph
Source: check_circle
Crossref

Collective computational intelligence in biology – Emergence of memory in somatic tissues

Biosystems
2023-01 | Journal article
Contributors: Sandhya Samarasinghe
Source: check_circle
Crossref

A Comprehensive conceptual and computational dynamics framework for autonomous regeneration of form and function in biological organisms

OpenAlex
2023-01-09 | Other
Contributors: sandhya samarasinghe; Tran Nguyen Minh-Thai
Source: check_circle
DataCite

A Comprehensive conceptual and computational dynamics framework for autonomous regeneration of form and function in biological organisms

OpenAlex
2023-01-09 | Other
Contributors: sandhya samarasinghe; Tran Nguyen Minh-Thai
Source: check_circle
DataCite

Water distribution in community irrigation using a multi-agent system

Journal of the Royal Society of New Zealand
2023-01-01 | Journal article
Contributors: Kitti Chiewchan; Patricia Anthony; Birendra KC; Sandhya Samarasinghe
Source: check_circle
Crossref

A System of Subsystems: Hierarchical Modularity of Guard Cell ABA Signalling Network defines its Evolutionary Success

2022-11-17 | Preprint
Contributors: sandhya samarasinghe; Pramuditha Waidyarathne
Source: check_circle
Crossref

A Comprehensive Conceptual and Computational Dynamics Framework for Autonomous Regeneration of Form and Function in Biological Organisms

2022-09-06 | Preprint
Contributors: Sandhya Samarasinghe; Tran Nguyen Minh-Thai
Source: check_circle
Crossref

A new hierarchical approach to multi-level model abstraction for simplifying ODE models of biological networks and a case study: The G1/S Checkpoint/DNA damage signalling pathways of mammalian cell cycle

Biosystems
2021-05 | Journal article
Contributors: Mutaz Khazaaleh; Sandhya Samarasinghe; Don Kulasiri
Source: check_circle
Crossref

Towards abstraction of computational modelling of mammalian cell cycle: Model reduction pipeline incorporating multi-level hybrid petri nets

Journal of Theoretical Biology
2020-07 | Journal article
Contributors: Ali Abroudi; Sandhya Samarasinghe; Don Kulasiri
Source: check_circle
Crossref

Agent based irrigation management for mixed-cropping farms

Lecture Notes in Electrical Engineering
2019 | Conference paper
Part of ISBN: 9789811326219
Source: Self-asserted source
sandhya samarasinghe
grade
Preferred source (of 2)‎

A Novel Data-Driven Boolean Model for Genetic Regulatory Networks

Frontiers in Physiology
2018 | Journal article
WOSUID:

WOS:000445632100001

Contributors: Chen, Leshi; Kulasiri, Don; Samarasinghe, Sandhya
Source: Self-asserted source
sandhya samarasinghe via ResearcherID

A comprehensive complex systems approach to the study and analysis of mammalian cell cycle control system in the presence of DNA damage stress

Journal of Theoretical Biology
2017 | Journal article
EID:

2-s2.0-85021755086

Contributors: Abroudi, A.; Samarasinghe, S.; Kulasiri, D.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier
grade
Preferred source (of 2)‎

A local sensitivity analysis of Ca²⁺-calmodulin binding and its influence over PP1 activity

Proceedings of 22nd International Congress on Modelling and Simulation
2017 | Conference paper
Source: Self-asserted source
sandhya samarasinghe

A local sensitivity analysis of Ca²⁺-calmodulin binding and its influence over PP1 activity

Proceedings of 22nd International Congress on Modelling and Simulation
2017 | Conference paper
Source: Self-asserted source
sandhya samarasinghe

A system of recurrent neural networks for modularising, parameterising and dynamic analysis of cell signalling networks

BioSystems
2017 | Journal article
EID:

2-s2.0-85014010455

Contributors: Samarasinghe, S.; Ling, H.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier
grade
Preferred source (of 2)‎

Analysis of ligand binding to macromolecules using kinetic and polynomial approaches

Proceedings of 22nd International Congress on Modelling and Simulation, Hobart, Tasmania, Australia
2017 | Conference paper
Source: Self-asserted source
sandhya samarasinghe

Analysis of ligand binding to macromolecules using kinetic and polynomial approaches

Proceedings of 22nd International Congress on Modelling and Simulation, Hobart, Tasmania, Australia
2017 | Conference paper
Source: Self-asserted source
sandhya samarasinghe

Computational investigation of Amyloid-β-induced location-and subunit-specific disturbances of NMDAR at hippocampal dendritic spine in Alzheimer’s disease

PLoS ONE
2017 | Journal article
EID:

2-s2.0-85028435732

Contributors: Liang, J.; Kulasiri, D.; Samarasinghe, S.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier
grade
Preferred source (of 2)‎

Global sensitivity analysis of a model related to memory formation in synapses: Model reduction based on epistemic parameter uncertainties and related issues

Journal of Theoretical Biology
2017 | Journal article
EID:

2-s2.0-85013173188

Contributors: Kulasiri, D.; Liang, J.; He, Y.; Samarasinghe, S.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier
grade
Preferred source (of 2)‎

A novel semi-quantitative Fuzzy Cognitive Map model for complex systems for addressing challenging participatory real life problems

Applied Soft Computing Journal
2016 | Journal article
EID:

2-s2.0-84978033672

Contributors: Obiedat, M.; Samarasinghe, S.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier
grade
Preferred source (of 2)‎

Artificial Neural Network Modelling

Studies in Computational Intelligence
2016 | Book
Part of ISBN: 9783319284934
Part of ISSN: 1860-949X
Contributors: Subana Shanmuganathan; Sandhya Samarasinghe
Source: Self-asserted source
sandhya samarasinghe via Crossref Metadata Search
grade
Preferred source (of 2)‎

Improved ultrasound based computer aided diagnosis system for breast cancer incorporating a new feature of mass central regularity degree (CRD)

Studies in Computational Intelligence
2016 | Book chapter
Source: Self-asserted source
sandhya samarasinghe
grade
Preferred source (of 3)‎

Modelling bidirectional modulations in synaptic plasticity: A biochemical pathway model to understand the emergence of long term potentiation (LTP) and long term depression (LTD)

Journal of Theoretical Biology
2016 | Journal article
EID:

2-s2.0-84969513496

Contributors: He, Y.; Kulasiri, D.; Samarasinghe, S.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier
grade
Preferred source (of 2)‎

Neural networks for robotic detection of mastitis in dairy cows: Netherlands and New Zealand perspectives

Proceedings of SAI Intelligent Systems Conference (IntelliSys) 2016: Volume 2
2016 | Conference paper
Part of ISBN: 978-3-319-56990-1
Source: Self-asserted source
sandhya samarasinghe
grade
Preferred source (of 4)‎

Order in the black box: Consistency and robustness of hidden neuron activation of feed forward neural networks and its use in efficient optimization of network structure

Studies in Computational Intelligence
2016 | Book chapter
Source: Self-asserted source
sandhya samarasinghe
grade
Preferred source (of 3)‎

Stochastic neural networks for modelling random processes from observed data

Studies in Computational Intelligence
2016 | Book chapter
Source: Self-asserted source
sandhya samarasinghe
grade
Preferred source (of 3)‎

A Review of Computational Models of Mammalian Cell Cycle

21st International Congress on Modelling and Simulation (Modsim2015)
2015 | Journal article
WOSUID:

WOS:000410535400079

Contributors: Abroudi, A.; Samarasinghe, S.; Kulasiri, D.
Source: Self-asserted source
sandhya samarasinghe via ResearcherID

Ca<sup>2+</sup> dysregulation in the endoplasmic reticulum related to Alzheimer's disease: A review on experimental progress and computational modeling

BioSystems
2015 | Journal article
EID:

2-s2.0-84930198272

Contributors: Liang, J.; Kulasiri, D.; Samarasinghe, S.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier
grade
Preferred source (of 2)‎

Computational modeling and experimental validation of odor detection behaviors of classically conditioned parasitic wasp, Microplitis croceipes

Biotechnology Progress
2015 | Journal article
EID:

2-s2.0-84928212209

Contributors: Zhou, Z.; Kulasiri, D.; Samarasinghe, S.; Rains, G.; Olson, D.M.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier
grade
Preferred source (of 2)‎

Computational techniques in mathematical modelling of biological switches

21st International Congress on Modelling and Simulation (Modsim2015)
2015 | Journal article
WOSUID:

WOS:000410535400081

Contributors: Chong, K. H.; Samarasinghe, S.; Kulasiri, D.; Zheng, J.
Source: Self-asserted source
sandhya samarasinghe via ResearcherID

Mathematical modelling of p53 basal dynamics and DNA damage response

Mathematical Biosciences
2015 | Journal article
EID:

2-s2.0-84920628098

Contributors: Chong, K.H.; Samarasinghe, S.; Kulasiri, D.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier
grade
Preferred source (of 2)‎

Modelling the dynamics of CaMKII-NMDAR complex related to memory formation in synapses: The possible roles of threonine 286 autophosphorylation of CaMKII in long term potentiation

Journal of Theoretical Biology
2015 | Journal article
EID:

2-s2.0-84911365665

Contributors: He, Y.; Kulasiri, D.; Samarasinghe, S.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier
grade
Preferred source (of 2)‎

Neural networks and fuzzy clustering methods for assessing the efficacy of microarray based intrinsic gene signatures in breast cancer classification and the character and relations of identified subtypes

Artificial Neural Networks
2015 | Book chapter
Source: Self-asserted source
sandhya samarasinghe
grade
Preferred source (of 3)‎

On the Use of Local and Global Search Paradigms for Computer-Aided Diagnosis of Breast Cancer

21st International Congress on Modelling and Simulation (Modsim2015)
2015 | Journal article
WOSUID:

WOS:000410535400078

Contributors: Abroudi, A.; Shokouhifar, M.; Samarasinghe, S.
Source: Self-asserted source
sandhya samarasinghe via ResearcherID

Prediction of wheat production using artificial neural networks and investigating indirect factors affecting it: Case study in canterbury province, New Zealand

Journal of Agricultural Science and Technology
2015 | Journal article
WOSUID:

WOS:000360584500001

Contributors: Safa, M.; Samarasinghe, S.; Nejat, M.
Source: Self-asserted source
sandhya samarasinghe via ResearcherID

Prediction of wheat production using artificial neural networks and investigating indirect factors affecting it: Case study in canterbury province, New Zealand

Journal of Agricultural Science and Technology
2015 | Journal article
EID:

2-s2.0-84935460314

Contributors: Safa, M.; Samarasinghe, S.; Nejat, M.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier

Regulation of meiosis initiation before the commitment point in budding yeast: A review of biology, molecular mechanisms and related mathematical models

Current Bioinformatics
2015 | Journal article
EID:

2-s2.0-84930516865

Contributors: Wannige, C.T.; Kulasiri, D.; Samarasinghe, S.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier
grade
Preferred source (of 2)‎

System Modelling of Mammalian Cell Cycle Regulation Using Multi-Level Hybrid Petri Nets

21st International Congress on Modelling and Simulation (Modsim2015)
2015 | Journal article
WOSUID:

WOS:000410535400080

Contributors: Abroudi, A.; Samarasinghe, S.
Source: Self-asserted source
sandhya samarasinghe via ResearcherID

A nutrient dependant switch explains mutually exclusive existence of meiosis and mitosis initiation in budding yeast

Journal of Theoretical Biology
2014 | Journal article
EID:

2-s2.0-84886474291

Contributors: Wannige, C.T.; Kulasiri, D.; Samarasinghe, S.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier
grade
Preferred source (of 2)‎

Artificial neural networks to identify naturally existing disease severity status

Neural Computing and Applications
2014 | Journal article
EID:

2-s2.0-84907706127

Contributors: Waidyarathne, K.P.; Samarasinghe, S.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier
grade
Preferred source (of 2)‎

Complex time series analysis of PM10 and PM2.5 for a coastal site using artificial neural network modelling and k-means clustering

Atmospheric Environment
2014 | Journal article
EID:

2-s2.0-84901006073

Contributors: Elangasinghe, M.A.; Singhal, N.; Dirks, K.N.; Salmond, J.A.; Samarasinghe, S.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier
grade
Preferred source (of 2)‎

Integrated analysis of gene network in childhood leukemia from microarray and pathway databases

BioMed Research International
2014 | Journal article
EID:

2-s2.0-84900015223

Contributors: Chaiboonchoe, A.; Samarasinghe, S.; Kulasiri, D.; Salehi-Ashtiani, K.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier
grade
Preferred source (of 2)‎

Neural networks and fuzzy clustering methods for assessing the efficacy of microarray based intrinsic gene signatures in breast cancer classification and the character and relations of identified subtypes

Artificial Neural Networks: Second Edition
2014 | Book
EID:

2-s2.0-84958668360

Contributors: Samarasinghe, S.; Chaiboonchoe, A.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier

Systems biology of synaptic plasticity: A review on N-methyl-d-aspartate receptor mediated biochemical pathways and related mathematical models

BioSystems
2014 | Journal article
EID:

2-s2.0-84903206925

Contributors: He, Y.; Kulasiri, D.; Samarasinghe, S.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier
grade
Preferred source (of 2)‎

The meiotic-mitotic initiation switch in budding yeast maintains its function robustly against sensitive parameter perturbations

BioSystems
2014 | Journal article
EID:

2-s2.0-84908150745

Contributors: Wannige, C.T.; Kulasiri, D.; Samarasinghe, S.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier
grade
Preferred source (of 2)‎

Computational experiments reveal the efficacy of targeting CDK2 and CKIs for significantly lowering cellular senescence bar for potential cancer treatment

BioSystems
2013 | Journal article
EID:

2-s2.0-84872669396

Contributors: Ling, H.; Samarasinghe, S.; Kulasiri, D.
Source: Self-asserted source
sandhya samarasinghe via Scopus - Elsevier
grade
Preferred source (of 2)‎

Diagnostic models for mastitis detection using sensor data from automatic milking systems: Current trends and future perspectives

2013 | Conference paper
Source: Self-asserted source
sandhya samarasinghe

Fuzzy representation and aggregation of fuzzy cognitive maps

2013 | Conference paper
Part of ISBN: 978-0-9872143-3-1
Source: Self-asserted source
sandhya samarasinghe

Fuzzy Representation and Aggregation of Fuzzy Cognitive Maps

20th International Congress on Modelling and Simulation (Modsim2013)
2013 | Journal article
WOSUID:

WOS:000357105900100

Contributors: Obiedat, Mamoon; Samarasinghe, Sandhya
Source: Self-asserted source
sandhya samarasinghe via ResearcherID
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