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Bioinformatics, proteomics, structural biology

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Employment (4)

Københavns Universitet: København K, DK

Employment
Source: check_circle
University of Copenhagen

University of Copenhagen: Copenhagen, Copenhagen, DK

2022-09-01 to present | Postdoctoral Researcher (Section for Plant Biochemistry, Department of Plant and Environmental Sciences)
Employment
Source: Self-asserted source
Mallika Vijayanathan

Biology Centre CAS: České Budějovice, Branišovská, CZ

2020-01-27 to 2022-08-31 | Postdoc (Plant Epigenetics)
Employment
Source: Self-asserted source
Mallika Vijayanathan

Rajiv Gandhi Centre for Biotechnology: Thiruvananthapuram, Kerala, IN

2018-05-03 to 2020-01-20 | Research Associate (Plant Disease Biology & Biotechnology)
Employment
Source: Self-asserted source
Mallika Vijayanathan

Education and qualifications (1)

Rajiv Gandhi Centre for Biotechnology: Thiruvananthapuram, Kerala, IN

2010-10-18 to 2018-05-31 | PhD (Plant Disease Biology & Biotechnology)
Qualification
Source: Self-asserted source
Mallika Vijayanathan

Works (14)

Structural and mechanistic insights into Quinolone Synthase to address its functional promiscuity

Communications Biology
2024 | Journal article | Author
DOI: 10.1038/s42003-024-06152-2
SOURCE-WORK-ID:

4a32f8e8-e89c-4a49-9d55-ff3b52f8ca71

EID:

2-s2.0-85193205944

PMID: 38745065
Contributors: Mallika Vijayanathan; Abhinav Koyamangalath Vadakkepat; Kozhinjampara R. Mahendran; Abdoallah Sharaf; Kristian Erik Høpfner Frandsen; Debashree Bandyopadhyay; M. Radhakrishna Pillai; Eppurath Vasudevan Soniya
Source: check_circle
University of Copenhagen
grade
Preferred source (of 2)‎

Identification of nitric oxide mediated defense signaling and its microRNA mediated regulation during Phytophthora capsici infection in black pepper

Physiology and Molecular Biology of Plants
2024-01 | Journal article
DOI: 10.1007/s12298-024-01414-z
Part of ISSN: 0971-5894
Part of ISSN: 0974-0430
Contributors: Srinivasan Asha; Divya Kattupalli; Mallika Vijayanathan; Dr E V Soniya
Source: Self-asserted source
Mallika Vijayanathan
grade
Preferred source (of 2)‎

Structural analysis unravels the functional promiscuity of Quinolone synthase-mediated polyketide biosynthesis in Aegle marmelos Correa

2022-08-26 | Preprint
DOI: 10.1101/2022.08.26.505429
Contributors: Mallika Vijayanathan; KV Abhinav; Debashree Bandyopadhyay; Kozhinjampara R Mahendran; Abdoallah Sharaf; M Radhakrishna Pillai; EV Soniya
Source: check_circle
Crossref

Phylogenetic profiling resolves early emergence of PRC2 and illuminates its functional core

Life Science Alliance
2022-04 | Journal article
DOI: 10.26508/lsa.202101271
Part of ISSN: 2575-1077
Contributors: Abdoallah Sharaf; Mallika Vijayanathan; Miroslav Oborník; Iva Mozgová
Source: Self-asserted source
Mallika Vijayanathan via Crossref Metadata Search

Polycomb Repressive Complex 2 in Eukaryotes—An Evolutionary Perspective

Epigenomes
2022-01-17 | Journal article
DOI: 10.3390/epigenomes6010003
Contributors: Mallika Vijayanathan; María Guadalupe Trejo-Arellano; Iva Mozgová
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Harnessing the natural pool of polyketide and non-ribosomal peptide family: A route map towards novel drug development

Current Molecular Pharmacology
2021-03 | Journal article
DOI: 10.2174/1874467214666210319145816
Part of ISSN: 1874-4672
Contributors: Aiswarya Girija; Mallika Vijayanathan; Sweda Sreekumar; Jasim Basheer; Tara G Menon; Radhakrishnan Edayileveetil Krishnankutty; Eppurathu Vasudevan Soniya
Source: Self-asserted source
Mallika Vijayanathan via Crossref Metadata Search
grade
Preferred source (of 2)‎

In silico approaches illustrate the evolutionary pattern and protein-small molecule interactions of quinolone synthase from Aegle marmelos Correa

Journal of Biomolecular Structure and Dynamics
2018-01 | Journal article
DOI: 10.1080/07391102.2017.1422991
Part of ISSN: 0739-1102
Contributors: V. Mallika; K.C. Sivakumar; G. Aiswarya; E.V. Soniya
Source: Self-asserted source
Mallika Vijayanathan via Crossref Metadata Search

Nitric oxide as a bioactive molecule in the regulation of chalcone synthase during jasmonic acid mediated defense signaling in ginger

Plant Cell, Tissue and Organ Culture (PCTOC)
2016-11 | Journal article
DOI: 10.1007/s11240-016-1129-8
Part of ISSN: 0167-6857
Contributors: Aiswarya Girija; Lovely Jael Paul Solomon Devakumar; Mallika Vijayanathan; Soniya Eppurathu Vasudevan
Source: Self-asserted source
Mallika Vijayanathan via Crossref Metadata Search

Ectopic expression and functional characterization of type III polyketide synthase mutants from Emblica officinalis Gaertn

Plant Cell Reports
2016-07 | Journal article
DOI: 10.1007/s00299-016-2020-0
Part of ISSN: 0721-7714
Contributors: Girija Aiswarya; Vijayanathan Mallika; Luis A. J. Mur; Eppurathu Vasudevan Soniya
Source: Self-asserted source
Mallika Vijayanathan via Crossref Metadata Search

Type III polyketide synthase repertoire in Zingiberaceae: computational insights into the sequence, structure and evolution

Development Genes and Evolution
2016-05-02 | Journal article
DOI: 10.1007/s00427-016-0548-1
Part of ISSN: 0949-944X
Contributors: Vijayanathan Mallika; Girija Aiswarya; Paily Thottathil Gincy; Appukuttan Remakanthan; Eppurathu Vasudevan Soniya
Source: Self-asserted source
Mallika Vijayanathan via Crossref Metadata Search

De novo Transcriptome Sequencing Reveals a Considerable Bias in the Incidence of Simple Sequence Repeats towards the Downstream of ‘Pre-miRNAs’ of Black Pepper

PLoS ONE
2013-03-04 | Journal article
DOI: 10.1371/journal.pone.0056694
Part of ISSN: 1932-6203
Contributors: Nisha Joy; Srinivasan Asha; Vijayan Mallika; Eppurathu Vasudevan Soniya; Luis Herrera-Estrella
Source: Self-asserted source
Mallika Vijayanathan via Crossref Metadata Search

Evolutionary Implications and Physicochemical Analyses of Selected Proteins of Type III Polyketide Synthase Family

Evolutionary Bioinformatics
2011-05 | Journal article
DOI: 10.4137/ebo.s6854
Part of ISSN: 1176-9343
Contributors: V. Mallika; K.C. Sivakumar; E.V. Soniya
Source: Self-asserted source
Mallika Vijayanathan via Crossref Metadata Search

PKSIIIexplorer: TSVM approach for predicting Type III polyketide synthase proteins

Bioinformation
2011-04 | Journal article
DOI: 10.6026/97320630006125
Part of ISSN: 0973-8894
Contributors: Mallika Vijayan; Sivakumar Krishnankutty Chandrika; Soniya Eppurathu Vasudevan
Source: Self-asserted source
Mallika Vijayanathan via Crossref Metadata Search

Kernel based machine learning algorithm for the efficient prediction of type III polyketide synthase family of proteins

Journal of Integrative Bioinformatics
2010-03-01 | Journal article
DOI: 10.1515/jib-2010-143
Part of ISSN: 1613-4516
Contributors: V Mallika; Kc Sivakumar; S Jaichand; Ev Soniya
Source: Self-asserted source
Mallika Vijayanathan via Crossref Metadata Search
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