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University of Vienna profile page

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Scopus Author ID: 55966312700
Scopus Author ID: 55966312700

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Employment (5)

University of Vienna: Vienna, AT

2021-08-01 to present | Assistant Professor (Department of Anthropology)
Employment
Source: Self-asserted source
Martin Kuhlwilm

Universitat Pompeu Fabra: Barcelona, ES

2019-04-01 to 2021-07-31 | LaCaixa JuniorLeader postdoctoral fellow
Employment
Source: Self-asserted source
Martin Kuhlwilm

Universitat Pompeu Fabra: Barcelona, Catalunya, ES

2015-10 to 2019-03-31 | Postdoctoral fellow (Institut de Biologia Evolutiva)
Employment
Source: Self-asserted source
Martin Kuhlwilm

Max Planck Institute for Evolutionary Anthropology: Leipzig, DE

2014-06 to 2015-10 | Research assistant
Employment
Source: Self-asserted source
Martin Kuhlwilm

Max Planck Institute for Evolutionary Anthropology: Leipzig, DE

2010-06 to 2014-06 | Max Planck Fellowship (PhD student)
Employment
Source: Self-asserted source
Martin Kuhlwilm

Education and qualifications (2)

Max Planck Institute for Evolutionary Anthropology: Leipzig, DE

2010-06 to 2015-07 | PhD (Evolutionary Genetics)
Education
Source: Self-asserted source
Martin Kuhlwilm

Martin-Luther-Universitat Halle-Wittenberg: Halle, Sachsen-Anhalt, DE

2004-10 to 2010-05 | Biologie-Diplom
Education
Source: Self-asserted source
Martin Kuhlwilm

Funding (4)

Historical perspectives on great ape RNA viruses

2023-01-01 to 2024-06-30 | Grant
FWF Austrian Science Fund (Vienna, AT)
URL: https://app.dimensions.ai/details/grant/grant.12957464
GRANT_NUMBER: TAI 729
Source: Self-asserted source
Martin Kuhlwilm via DimensionsWizard

Navigating landscapes of admixture

2021-08-01 to 2029-07-31 | Grant
Vienna Science and Technology Fund (Vienna, AT)
URL: https://app.dimensions.ai/details/grant/grant.9728054
GRANT_NUMBER: VRG20-001
Source: Self-asserted source
Martin Kuhlwilm via DimensionsWizard

Admixture in primates and its functional relevance

2019-04 to 2022-03 | Grant
“la Caixa” Foundation (Barcelona, ES)
GRANT_NUMBER:

LCF/BQ/PR19/11700002
Source: Self-asserted source
Martin Kuhlwilm

Comparative analysis of the Y chromosome in humans and great apes

Source: Self-asserted source
Martin Kuhlwilm
grade
Preferred source (of 2)‎

Works (40)

A curated great ape genome diversity panel

2025-02-19 | Preprint
DOI: 10.1101/2025.02.18.638799
Contributors: Sojung Han; Sepand Riyahi; Xin Huang; Martin Kuhlwilm
Source: check_circle
Crossref

Intra-individual variability in ancient plasmodium DNA recovery highlights need for enhanced sampling

Scientific Reports
2025-01-04 | Journal article | Author
DOI: 10.1038/s41598-024-85038-z
SOURCE-WORK-ID:

d8d18fac-fdca-4bb0-9713-06689cb6c694

EID:

2-s2.0-85214084069

PMID: 39755798
Contributors: Alejandro Llanos-Lizcano; Michelle Hämmerle; Alessandra Sperduti; Susanna Sawyer; Brina Zagorc; Kadir Toykan Özdoğan; Meriam Guellil; Olivia Cheronet; Martin Kuhlwilm; Ron Pinhasi et al.
Source: check_circle
University of Vienna - u:cris

Screening great ape museum specimens for DNA viruses

Scientific Reports
2024-11-30 | Journal article
DOI: 10.1038/s41598-024-80780-w
Part of ISSN: 2045-2322
Contributors: Michelle Hämmerle; Meriam Guellil; Lovro Trgovec-Greif; Olivia Cheronet; Susanna Sawyer; Irune Ruiz-Gartzia; Esther Lizano; Aigerim Rymbekova; Pere Gelabert; Paolo Bernardi et al.
Source: Self-asserted source
Martin Kuhlwilm

Social and genetic diversity in first farmers of central Europe

Nature Human Behaviour
2024-11-29 | Journal article
DOI: 10.1038/s41562-024-02034-z
Part of ISSN: 2397-3374
Contributors: PERE GELABERT; Penelope Fiona Bickle; Daniela Hofmann; Maria Eva Teschler-Nicola; Alexandra Anders; Xin Huang; Michelle Hämmerle; Iñigo Olalde; Romain Fournier; Harald Ringbauer et al.
Source: Self-asserted source
Martin Kuhlwilm

Deep genetic substructure within bonobos

Current Biology
2024-10 | Journal article
DOI: 10.1016/j.cub.2024.09.043
DOI: 10.1101/2024.07.01.601523
Part of ISSN: 0960-9822
Contributors: Sojung Han; Cesare de Filippo; Genís Parra; Juan Ramon Meneu; Romain Laurent; Peter Frandsen; Christina Hvilsom; Ilan Gronau; Tomas Marques-Bonet; Martin Kuhlwilm et al.
Source: Self-asserted source
Martin Kuhlwilm
grade
Preferred source (of 4)‎

Link between Monkeypox Virus Genomes from Museum Specimens and 1965 Zoo Outbreak

Emerging Infectious Diseases
2024-04 | Journal article
DOI: 10.3201/eid3004.231546
Part of ISSN: 1080-6040
Part of ISSN: 1080-6059
Contributors: Michelle Hämmerle; Aigerim Rymbekova; Pere Gelabert; Susanna Sawyer; Olivia Cheronet; Paolo Bernardi; Sébastien Calvignac-Spencer; Martin Kuhlwilm; Meriam Guellil; Ron Pinhasi
Source: Self-asserted source
Martin Kuhlwilm
grade
Preferred source (of 2)‎

A complete mitochondrial genome of a Roman-eraPlasmodium falciparum

2024-03-05 | Preprint
DOI: 10.1101/2024.03.05.583465
Contributors: Alejandro Llanos-Lizcano; Michelle Hämmerle; Alessandra Sperduti; Susanna Sawyer; Brina Zagorc; Kadir Toykan Özdoğan; Meriam Guellil; Olivia Cheronet; Martin Kuhlwilm; Ron Pinhasi et al.
Source: check_circle
Crossref

Harnessing deep learning for population genetic inference

Nature Reviews Genetics
2024-01 | Journal article
DOI: 10.1038/s41576-023-00636-3
Contributors: Xin Huang; Aigerim Rymbekova; Olga Dolgova; Oscar Lao; Martin Kuhlwilm
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Identification of constrained sequence elements across 239 primate genomes

Nature
2023-11-29 | Journal article | Author
DOI: 10.1038/s41586-023-06798-8
Part of ISSN: 0028-0836
Part of ISSN: 1476-4687
Contributors: Lukas F.K. Kuderna; Jacob C. Ulirsch; Sabrina Rashid; Mohamed Ameen; Laksshman Sundaram; Glenn Hickey; Anthony J. Cox; Hong Gao; Arvind Kumar; Francois Aguet et al.
Source: Self-asserted source
Martin Kuhlwilm
grade
Preferred source (of 2)‎

Ghost admixture in eastern gorillas

Nature Ecology & Evolution
2023-07-27 | Journal article | Author
DOI: 10.1038/s41559-023-02145-2
Part of ISSN: 2397-334X
Contributors: Harvinder Pawar; Aigerim Rymbekova; Sebastian Cuadros-Espinoza; Xin Huang; Marc de Manuel; Tom van der Valk; Irene Lobon; Marina Alvarez-Estape; Marc Haber; Olga Dolgova et al.
Source: Self-asserted source
Martin Kuhlwilm

A global catalog of whole-genome diversity from 233 primate species

Science
2023-06-02 | Journal article
DOI: 10.1126/science.abn7829
Contributors: Lukas F. K. Kuderna; Hong Gao; Mareike C. Janiak; Martin Kuhlwilm; Joseph D. Orkin; Thomas Bataillon; Shivakumara Manu; Alejandro Valenzuela; Juraj Bergman; Marjolaine Rousselle et al.
Source: check_circle
Crossref

Genome-wide coancestry reveals details of ancient and recent male-driven reticulation in baboons

Science
2023-06-02 | Journal article
DOI: 10.1126/science.abn8153
Contributors: Erik F. Sørensen; R. Alan Harris; Liye Zhang; Muthuswamy Raveendran; Lukas F. K. Kuderna; Jerilyn A. Walker; Jessica M. Storer; Martin Kuhlwilm; Claudia Fontsere; Lakshmi Seshadri et al.
Source: check_circle
Crossref

The landscape of tolerated genetic variation in humans and primates

Science
2023-06-02 | Journal article | Author
DOI: 10.1126/science.abn8197
Part of ISSN: 0036-8075
Part of ISSN: 1095-9203
Contributors: Hong Gao; Tobias Hamp; Jeffrey Ede; Joshua G. Schraiber; Jeremy McRae; Moriel Singer-Berk; Yanshen Yang; Anastasia Susanna Dagmar Dietrich; Petko Fiziev; Lukas F.K. Kuderna et al.
Source: Self-asserted source
Martin Kuhlwilm

Divergent sensory and immune gene evolution in sea turtles with contrasting demographic and life histories

Proceedings of the National Academy of Sciences
2023-02-14 | Journal article
DOI: 10.1073/pnas.2201076120
Part of ISSN: 0027-8424
Part of ISSN: 1091-6490
Contributors: Blair P Bentley; Tomas carrasco; Elisa Ramos; Harvinder Pawar; Larissa Souza Arantes; Alana Alexander; Shreya Banerjee; Patrick Masterson; Martin Kuhlwilm; Martin Pippel et al.
Source: Self-asserted source
Martin Kuhlwilm

sstar: A Python Package for Detecting Archaic Introgression from Population Genetic Data with <i>S</i>*

Molecular Biology and Evolution
2022-11-03 | Journal article | Author
DOI: 10.1093/molbev/msac212
Part of ISSN: 0737-4038
Part of ISSN: 1537-1719
Contributors: Xin Huang; Patricia Kruisz; Martin Kuhlwilm
Source: Self-asserted source
Martin Kuhlwilm
grade
Preferred source (of 4)‎

Population dynamics and genetic connectivity in recent chimpanzee history

Cell Genomics
2022-06 | Journal article
DOI: 10.1016/j.xgen.2022.100133
Part of ISSN: 2666-979X
Contributors: Claudia Fontsere; Martin Kuhlwilm; Carlos Morcillo-Suarez; Marina Alvarez-Estape; Jack D. Lester; Paolo Gratton; Joshua M. Schmidt; Paula Dieguez; Thierry Aebischer; Paula Álvarez-Varona et al.
Source: Self-asserted source
Martin Kuhlwilm

Temporal mapping of derived high-frequency gene variants supports the mosaic nature of the evolution of Homo sapiens

Scientific Reports
2022-06-15 | Journal article
DOI: 10.1038/s41598-022-13589-0
Part of ISSN: 2045-2322
Contributors: Alejandro Andirkó; Juan Moriano; Alessandro Vitriolo; Martin Kuhlwilm; Giuseppe Testa; Cedric Boeckx
Source: Self-asserted source
Martin Kuhlwilm

The genetic impact of an Ebola outbreak on a wild gorilla population

BMC Genomics
2021 | Journal article
DOI: 10.1186/s12864-021-08025-y
SOURCE-WORK-ID:

4b50652e-4798-43ab-b563-08fc5c8fbe16

WOSUID:

000706138700001

EID:

2-s2.0-85117263016
Contributors: Martin Kuhlwilm; Claudia Fontsere; Peter Frandsen; Jessica Hernandez-Rodriguez; Jonas Niemann; Camilla Hjorth Scharff-Olsen; Dominique Vallet; Pascaline Le Gouar; Nelly Ménard; Arcadi Navarro et al.
Source: check_circle
University of Vienna - u:cris

HuConTest: Testing Human Contamination in Great Ape Samples

Genome Biology and Evolution
2021-06-08 | Journal article
DOI: 10.1093/gbe/evab117
Contributors: Martin Kuhlwilm; Claudia Fontsere; Sojung Han; Marina Alvarez-Estape; Tomas Marques-Bonet; David Enard
Source: check_circle
Crossref

Epigenomic profiling of primate lymphoblastoid cell lines reveals the evolutionary patterns of epigenetic activities in gene regulatory architectures

Nature Communications
2021-05-25 | Journal article
DOI: 10.1038/s41467-021-23397-1
Contributors: Raquel García-Pérez; Paula Esteller-Cucala; Glòria Mas; Irene Lobón; Valerio Di Carlo; Meritxell Riera; Martin Kuhlwilm; Arcadi Navarro; Antoine Blancher; Luciano Di Croce et al.
Source: check_circle
Crossref

Maximizing the acquisition of unique reads in noninvasive capture sequencing experiments

Molecular Ecology Resources
2021-04 | Journal article
DOI: 10.1111/1755-0998.13300
Part of ISSN: 1755-098X
Part of ISSN: 1755-0998
Contributors: Claudia Fontsere; Marina Álvarez Estapé; Jack Lester; Mimi Arandjelovic; Martin Kuhlwilm; Paula Dieguez; Anthony Agbor; Samuel Angedakin; Emmanuel Ayuk Ayimisin; Mattia Bessone et al.
Source: Self-asserted source
Martin Kuhlwilm

Resurrection of the Ghosts

BioEssays
2020-06 | Journal article
DOI: 10.1002/bies.202000057
Contributors: Martin Kuhlwilm
Source: check_circle
Crossref

The dental proteome of Homo antecessor

Nature
2020-04-09 | Journal article
DOI: 10.1038/s41586-020-2153-8
Contributors: Frido Welker; Jazmín Ramos-Madrigal; Petra Gutenbrunner; Meaghan Mackie; Shivani Tiwary; Rosa Rakownikow Jersie-Christensen; Cristina Chiva; Marc R. Dickinson; Martin Kuhlwilm; Marc de Manuel et al.
Source: check_circle
Crossref

Admixture in Mammals and How to Understand Its Functional Implications

BioEssays
2019-12 | Journal article
DOI: 10.1002/bies.201900123
Contributors: Claudia Fontsere; Marc de Manuel; Tomas Marques‐Bonet; Martin Kuhlwilm
Source: check_circle
Crossref

Enamel proteome shows that Gigantopithecus was an early diverging pongine

Nature
2019-12 | Journal article
DOI: 10.1038/s41586-019-1728-8
Part of ISSN: 0028-0836
Part of ISSN: 1476-4687
Source: Self-asserted source
Martin Kuhlwilm

Ancient admixture from an extinct ape lineage into bonobos

Nature Ecology & Evolution
2019-04-29 | Journal article
DOI: 10.1038/s41559-019-0881-7
Contributors: Martin Kuhlwilm; Sojung Han; Vitor C. Sousa; Laurent Excoffier; Tomas Marques-Bonet
Source: check_circle
Crossref

The Genomic Footprints of the Fall and Recovery of the Crested Ibis

Current Biology
2019-01 | Journal article
DOI: 10.1016/j.cub.2018.12.008
Part of ISSN: 0960-9822
Source: Self-asserted source
Martin Kuhlwilm

Selective single molecule sequencing and assembly of a human Y chromosome of African origin

Nature Communications
2019-01-02 | Journal article
DOI: 10.1038/s41467-018-07885-5
Contributors: Lukas F. K. Kuderna; Esther Lizano; Eva Julià; Jessica Gomez-Garrido; Aitor Serres-Armero; Martin Kuhlwilm; Regina Antoni Alandes; Marina Alvarez-Estape; David Juan; Heath Simon et al.
Source: check_circle
Crossref
grade
Preferred source (of 3)‎

The evolution of FOXP2 in the light of admixture

Current Opinion in Behavioral Sciences
2018-06 | Journal article
DOI: 10.1016/j.cobeha.2018.04.006
Contributors: Martin Kuhlwilm
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

A catalog of single nucleotide changes distinguishing modern humans from archaic hominins

2018-04-11 | Other
DOI: 10.1101/298950
Contributors: Martin Kuhlwilm; Cedric Boeckx
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Selection in the Introgressed Regions of the Chimpanzee Genome

Genome Biology and Evolution
2018-04-04 | Journal article
DOI: 10.1093/gbe/evy077
Part of ISSN: 1759-6653
Contributors: Jessica Nye; Hafid Laayouni; Martin Kuhlwilm; Mayukh Mondal; Tomas Marques-Bonet; Jaume Bertranpetit
Source: Self-asserted source
Martin Kuhlwilm via Crossref Metadata Search
grade
Preferred source (of 2)‎

Genetic variation in Pan species is shaped by demographic history and underlies lineage-specific functions

2018-03-11 | Other
DOI: 10.1101/280016
Contributors: Sojung Han; Aida M. Andrés; Tomas Marques-Bonet; Martin Kuhlwilm
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Evolution and demography of the great apes

Current Opinion in Genetics & Development
2016 | Journal article
DOI: 10.1016/j.gde.2016.09.005
Contributors: Martin Kuhlwilm; Marc de Manuel; Alexander Nater; Maja P Greminger; Michael Krützen; Tomas Marques-Bonet
Source: Self-asserted source
Martin Kuhlwilm via Crossref Metadata Search
grade
Preferred source (of 2)‎

Chimpanzee genomic diversity reveals ancient admixture with bonobos

Science
2016-10 | Journal article
DOI: 10.1126/science.aag2602
Contributors: M. de Manuel; M. Kuhlwilm; P. Frandsen; V. C. Sousa; T. Desai; J. Prado-Martinez; J. Hernandez-Rodriguez; I. Dupanloup; O. Lao; P. Hallast et al.
Source: Self-asserted source
Martin Kuhlwilm via Crossref Metadata Search
grade
Preferred source (of 2)‎

Ancient gene flow from early modern humans into Eastern Neanderthals

Nature
2016-02 | Journal article
DOI: 10.1038/nature16544
Contributors: Martin Kuhlwilm; Ilan Gronau; Melissa J. Hubisz; Cesare de Filippo; Javier Prado-Martinez; Martin Kircher; Qiaomei Fu; Hernán A. Burbano; Carles Lalueza-Fox; Marco de la Rasilla et al.
Source: Self-asserted source
Martin Kuhlwilm via Crossref Metadata Search
grade
Preferred source (of 2)‎

A test for ancient selective sweeps and an application to candidate sites in modern humans

Molecular Biology and Evolution
2014 | Journal article
DOI: 10.1093/molbev/msu255
EID:

2-s2.0-84925002619
Contributors: Racimo, F.; Kuhlwilm, M.; Slatkin, M.
Source: Self-asserted source
Martin Kuhlwilm via Scopus - Elsevier

Analysis of candidate genes for lineage-specific expression changes in humans and primates.

2014-08 | Journal article
DOI: 10.1021/pr500045f
PMID: 24911366
Contributors: Lindskog C; Kuhlwilm M; Davierwala A; Fu N; Hegde G; Uhlén M; Navani S; Pääbo S; Pontén F
Source: Self-asserted source
Martin Kuhlwilm via Europe PubMed Central
grade
Preferred source (of 2)‎

Patterns of coding variation in the complete exomes of three Neandertals.

2014-05 | Journal article
DOI: 10.1073/pnas.1405138111
PMID: 24753607
Contributors: Castellano S; Parra G; Sánchez-Quinto FA; Racimo F; Kuhlwilm M; Kircher M; Sawyer S; Fu Q; Heinze A; Nickel B et al.
Source: Self-asserted source
Martin Kuhlwilm via Europe PubMed Central
grade
Preferred source (of 2)‎

The complete genome sequence of a Neanderthal from the Altai Mountains.

2014-01 | Journal article
DOI: 10.1038/nature12886
PMID: 24352235
PMC: PMC4031459
Contributors: Prüfer K; Racimo F; Patterson N; Jay F; Sankararaman S; Sawyer S; Heinze A; Renaud G; Sudmant PH; de Filippo C et al.
Source: Self-asserted source
Martin Kuhlwilm via Europe PubMed Central
grade
Preferred source (of 2)‎

Identification of putative target genes of the transcription factor RUNX2.

2013 | Journal article
DOI: 10.1371/journal.pone.0083218
PMID: 24349465
PMC: PMC3861491
Contributors: Kuhlwilm M; Davierwala A; Pääbo S
Source: Self-asserted source
Martin Kuhlwilm via Europe PubMed Central
grade
Preferred source (of 2)‎

Peer review (6 reviews for 5 publications/grants)

Review activity for Journal of archaeological method and theory. (1)
Review activity for Journal of Genetics and Genomics. (2)
Review activity for Nature (1)
Review activity for PLOS genetics. (1)
Review activity for PloS one. (1)
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