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ResearcherID: J-6209-2014

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Works (47)

Changes in the expression of N- and O-glycopeptides in patients with colorectal cancer and hepatocellular carcinoma quantified by full-MS scan FT-ICR and multiple reaction monitoring

Journal of Proteomics
2017 | Journal article
DOI: 10.1016/j.jprot.2016.09.004
WOSUID:

WOS:000393529100006
Contributors: Darebna, Petra; Novak, Petr; Kucera, Radek; Topolcan, Ondrej; Sanda, Miloslav; Goldman, Radoslav; Pompach, Petr
Source: Self-asserted source
Petr Pompach via ResearcherID

Modifications in the glycerophospholipid composition between the Coxiella burnetii phase I and phase II cells suggest an association with phase variation of the bacterium

Acta Virologica
2016 | Journal article
DOI: 10.4149/av_2016_01_27
WOSUID:

WOS:000384894300003
Contributors: Frimmelova, M.; Toman, R.; Pompach, P.; Skultety, L.
Source: Self-asserted source
Petr Pompach via ResearcherID

Planar Functionalized Surfaces for Direct Immunoaffinity Desorption/Ionization Mass Spectrometry

Clinical Chemistry
2016 | Journal article
DOI: 10.1373/clinchem.2015.244004
WOSUID:

WOS:000367703400036
Contributors: Pompach, Petr; Novakova, Jana; Kavan, Daniel; Benada, Oldrich; Ruzicka, Viktor; Volny, Michael; Novak, Petr
Source: Self-asserted source
Petr Pompach via ResearcherID

Protein Chips Compatible with MALDI Mass Spectrometry Prepared by Ambient Ion Landing

Analytical Chemistry
2016 | Journal article
DOI: 10.1021/acs.analchem.6b01366
WOSUID:

WOS:000382805900028
Contributors: Pompach, Petr; Benada, Oldrich; Rosulek, Michal; Darebna, Petra; Hausner, Jiri; Ruzicka, Viktor; Volny, Michael; Novak, Petr
Source: Self-asserted source
Petr Pompach via ResearcherID

High-throughput workflow for identification of phosphorylated peptides by LC-MALDI-TOF/TOF-MS coupled to in situ enrichment on MALDI plates functionalized by ion landing

Journal of Mass Spectrometry
2015 | Journal article
DOI: 10.1002/jms.3586
WOSUID:

WOS:000355618600003
Contributors: Krasny, Lukas; Pompach, Petr; Strnadova, Marcela; Hynek, Radovan; Valis, Karel; Havlicek, Vladimir; Novak, Petr; Volny, Michael
Source: Self-asserted source
Petr Pompach via ResearcherID

Dimerization of an Immunoactivating Peptide Derived from Mycobacterial hsp65 Using N-Hydroxysuccinimide Based Bifunctional Reagents Is Critical for Its Antitumor Properties (vol 23, pg 2032, 2012)

Bioconjugate Chemistry
2014 | Journal article
DOI: 10.1021/bc400578j
WOSUID:

WOS:000331779700028
Contributors: Bezouska, Karel; Kubinkova, Zuzana; Stribny, Jiri; Volfova, Barbora; Pompach, Petr; Kuzma, Marek; Sirova, Milada; Rihova, Blanka
Source: Self-asserted source
Petr Pompach via ResearcherID

Protein and Site Specificity of Fucosylation in Liver-Secreted Glycoproteins

Journal of Proteome Research
2014 | Journal article
DOI: 10.1021/pr5005482
WOSUID:

WOS:000346039400024
Contributors: Pompach, Petr; Ashline, David J.; Brnakova, Zuzana; Benicky, Julius; Sanda, Miloslav; Goldman, Radoslav
Source: Self-asserted source
Petr Pompach via ResearcherID

Quantification of Fucosylated Hemopexin and Complement Factor H in Plasma of Patients with Liver Disease

Analytical Chemistry
2014 | Journal article
DOI: 10.1021/ac502727s
WOSUID:

WOS:000344510200032
Contributors: Benicky, Julius; Sanda, Miloslav; Pompach, Petr; Wu, Jing; Goldman, Radoslav
Source: Self-asserted source
Petr Pompach via ResearcherID

Synthetic N-Acetyl-D-glucosamine Based Fully Branched Tetrasaccharide, a Mimetic of the Endogenous Ligand for CD69, Activates CD69(+) Killer Lymphocytes upon Dimerization via a Hydrophilic Flexible Linker (Retraction of vol 53, pg 4050, 2010)

Journal of Medicinal Chemistry
2014 | Journal article
DOI: 10.1021/jm5007726
WOSUID:

WOS:000338184100040
Contributors: Kovalova, Anna; Ledvina, Miroslav; Saman, David; Zyka, Daniel; Kubickova, Monika; Zidek, Lukas; Sklenar, Vladimir; Pompach, Petr; Kavan, Daniel; Bily, Jan et al.
Source: Self-asserted source
Petr Pompach via ResearcherID

Exploring Site-Specific N-Glycosylation Microheterogeneity of Haptoglobin Using Glycopeptide CID Tandem Mass Spectra and Glycan Database Search

Journal of Proteome Research
2013 | Journal article
DOI: 10.1021/pr400196s
WOSUID:

WOS:000322852800010
Contributors: Chandler, Kevin Brown; Pompach, Petr; Goldman, Radoslav; Edwards, Nathan
Source: Self-asserted source
Petr Pompach via ResearcherID

Figure_S1.tif

Figshare
2013 | Other
DOI: http://dx.doi.org/10.1371/journal.pone.0057083.s001
WOSUID:

DRCI:DATA2013079003359981
Contributors: Grousl, Tomas; Novakova, Lenka; Ivanov, Pavel; Malcova, Ivana; Pompach, Petr; Frydlova, Ivana; Slaba, Renata; Senohrabkova, Lenka; Hasek, Jiri
Source: Self-asserted source
Petr Pompach via ResearcherID

Figure_S2.tif

Figshare
2013 | Other
DOI: http://dx.doi.org/10.1371/journal.pone.0057083.s002
WOSUID:

DRCI:DATA2013079003359982
Contributors: Grousl, Tomas; Novakova, Lenka; Ivanov, Pavel; Malcova, Ivana; Pompach, Petr; Frydlova, Ivana; Slaba, Renata; Senohrabkova, Lenka; Hasek, Jiri
Source: Self-asserted source
Petr Pompach via ResearcherID

Figure_S3.tif

Figshare
2013 | Other
DOI: http://dx.doi.org/10.1371/journal.pone.0057083.s003
WOSUID:

DRCI:DATA2013079003359983
Contributors: Grousl, Tomas; Novakova, Lenka; Ivanov, Pavel; Malcova, Ivana; Pompach, Petr; Frydlova, Ivana; Slaba, Renata; Senohrabkova, Lenka; Hasek, Jiri
Source: Self-asserted source
Petr Pompach via ResearcherID

Figure_S4.tif

Figshare
2013 | Other
DOI: http://dx.doi.org/10.1371/journal.pone.0057083.s004
WOSUID:

DRCI:DATA2013079003359984
Contributors: Grousl, Tomas; Novakova, Lenka; Ivanov, Pavel; Malcova, Ivana; Pompach, Petr; Frydlova, Ivana; Slaba, Renata; Senohrabkova, Lenka; Hasek, Jiri
Source: Self-asserted source
Petr Pompach via ResearcherID

Heat Shock-Induced Accumulation of Translation Elongation and Termination Factors Precedes Assembly of Stress Granules in S. cerevisiae

Figshare
2013 | Other
WOSUID:

DRCI:DATA2013076003359980
Contributors: Grousl, Tomas; Novakova, Lenka; Ivanov, Pavel; Malcova, Ivana; Pompach, Petr; Frydlova, Ivana; Slaba, Renata; Senohrabkova, Lenka; Hasek, Jiri
Source: Self-asserted source
Petr Pompach via ResearcherID

Heat Shock-Induced Accumulation of Translation Elongation and Termination Factors Precedes Assembly of Stress Granules in S. cerevisiae

Plos One
2013 | Journal article
DOI: 10.1371/journal.pone.0057083
WOSUID:

WOS:000316849500064
Contributors: Grousl, Tomas; Ivanov, Pavel; Malcova, Ivana; Pompach, Petr; Frydlova, Ivana; Slaba, Renata; Senohrabkova, Lenka; Novakova, Lenka; Hasek, Jiri
Source: Self-asserted source
Petr Pompach via ResearcherID

Interlaboratory Study on Differential Analysis of Protein Glycosylation by Mass Spectrometry: The ABRF Glycoprotein Research Multi-Institutional Study 2012

Molecular & Cellular Proteomics
2013 | Journal article
DOI: 10.1074/mcp.M113.030643
WOSUID:

WOS:000330537000021
Contributors: Leymarie, Nancy; Griffin, Paula J.; Jonscher, Karen; Kolarich, Daniel; Orlando, Ron; McComb, Mark; Zaia, Joseph; Aguilan, Jennifer; Alley, William R.; Altmann, Friederich et al.
Source: Self-asserted source
Petr Pompach via ResearcherID

LC-MS3 quantification of O-glycopeptides in human serum

Electrophoresis
2013 | Journal article
DOI: 10.1002/elps.201200658
WOSUID:

WOS:000327665500010
Contributors: Sanda, Miloslav; Pompach, Petr; Benicky, Julius; Goldman, Radoslav
Source: Self-asserted source
Petr Pompach via ResearcherID

MS identification of Yef3 (eEF3) protein

Figshare
2013 | Other
DOI: http://dx.doi.org/10.1371/journal.pone.0057083.t002
WOSUID:

DRCI:DATA2014037003205761
Contributors: Grousl, Tomas; Novakova, Lenka; Ivanov, Pavel; Malcova, Ivana; Pompach, Petr; Frydlova, Ivana; Slaba, Renata; Senohrabkova, Lenka; Hasek, Jiri
Source: Self-asserted source
Petr Pompach via ResearcherID

Purification and characterization of a nitrilase from Aspergillus niger K10 (vol 73, pg 567, 2006)

Applied Microbiology and Biotechnology
2013 | Journal article
DOI: 10.1007/s00253-013-4743-y
WOSUID:

WOS:000317136700046
Contributors: Kaplan, Ondrej; Vejvoda, Vojtech; Plihal, Ondrej; Pompach, Petr; Kavan, Daniel; Bojarova, Pavla; Bezouska, Karel; Mackova, Martina; Cantarella, Maria; Jirku, Vladimir et al.
Source: Self-asserted source
Petr Pompach via ResearcherID

Quantitative Liquid Chromatography-Mass Spectrometry-Multiple Reaction Monitoring (LC-MS-MRM) Analysis of Site-specific Glycoforms of Haptoglobin in Liver Disease

Molecular & Cellular Proteomics
2013 | Journal article
DOI: 10.1074/mcp.M112.023325
WOSUID:

WOS:000319705100021
Contributors: Sanda, Miloslav; Pompach, Petr; Brnakova, Zuzana; Wu, Jing; Makambi, Kepher; Goldman, Radoslav
Source: Self-asserted source
Petr Pompach via ResearcherID

Site-specific Glycoforms of Haptoglobin in Liver Cirrhosis and Hepatocellular Carcinoma

Molecular & Cellular Proteomics
2013 | Journal article
DOI: 10.1074/mcp.M112.023259
WOSUID:

WOS:000319705100020
Contributors: Pompach, Petr; Brnakova, Zuzana; Sanda, Miloslav; Wu, Jing; Edwards, Nathan; Goldman, Radoslav
Source: Self-asserted source
Petr Pompach via ResearcherID

Yeast strains

Figshare
2013 | Other
DOI: http://dx.doi.org/10.1371/journal.pone.0057083.t001
WOSUID:

DRCI:DATA2014037003205781
Contributors: Grousl, Tomas; Novakova, Lenka; Ivanov, Pavel; Malcova, Ivana; Pompach, Petr; Frydlova, Ivana; Slaba, Renata; Senohrabkova, Lenka; Hasek, Jiri
Source: Self-asserted source
Petr Pompach via ResearcherID

Analysis of Tubulin Alpha-1A/1B C-Terminal Tail Post-translational Poly-glutamylation Reveals Novel Modification Sites

Journal of Proteome Research
2012 | Journal article
DOI: 10.1021/pr2011044
WOSUID:

WOS:000300916200044
Contributors: Sahab, Ziad J.; Kirilyuk, Alexander; Zhang, Lihua; Khamis, Zahraa I.; Pompach, Petr; Sung, YouMe; Byers, Stephen W.
Source: Self-asserted source
Petr Pompach via ResearcherID

Dimerization of an Immunoactivating Peptide Derived from Mycobacterial hsp65 Using N-Hydroxysuccinimide Based Bifunctional Reagents Is Critical for Its Antitumor Properties

Bioconjugate Chemistry
2012 | Journal article
DOI: 10.1021/bc300056x
WOSUID:

WOS:000309855000006
Contributors: Bezouska, Karel; Kubinkova, Zuzana; Stribny, Jiri; Volfova, Barbora; Pompach, Petr; Kuzma, Marek; Sirova, Milada; Rihova, Blanka
Source: Self-asserted source
Petr Pompach via ResearcherID

Evolution of haptoglobin glycoforms in liver disease progression

Glycobiology
2012 | Journal article
WOSUID:

WOS:000310368700271
Contributors: Goldman, Radoslav; Pompach, Petr; Sanda, Miloslav; Brnakova, Zuzana; Wu, Jing
Source: Self-asserted source
Petr Pompach via ResearcherID

In-situ enrichment of phosphopeptides on MALDI plates modified by ambient ion landing

Journal of Mass Spectrometry
2012 | Journal article
DOI: 10.1002/jms.3081
WOSUID:

WOS:000309396300004
Contributors: Krasny, Lukas; Pompach, Petr; Strohalm, Martin; Obsilova, Veronika; Strnadova, Marcela; Novak, Petr; Volny, Michael
Source: Self-asserted source
Petr Pompach via ResearcherID

Semi-Automated Identification of N-Glycopeptides by Hydrophilic Interaction Chromatography, nano-Reverse-Phase LC-MS/MS, and Glycan Database Search

Journal of Proteome Research
2012 | Journal article
DOI: 10.1021/pr201183w
WOSUID:

WOS:000300916200027
Contributors: Pompach, Petr; Chandler, Kevin B.; Lan, Renny; Edwards, Nathan; Goldman, Radoslav
Source: Self-asserted source
Petr Pompach via ResearcherID

Sequencing, cloning and high-yield expression of a fungal beta-N-acetylhexosaminidase in Pichia pastoris

Protein Expression and Purification
2012 | Journal article
DOI: 10.1016/j.pep.2012.01.004
WOSUID:

WOS:000300923700032
Contributors: Slamova, Kristyna; Bojarova, Pavla; Gerstorferova, Daniela; Fliedrova, Barbora; Hofmeisterova, Jana; Fiala, Martin; Pompach, Petr; Kren, Vladimir
Source: Self-asserted source
Petr Pompach via ResearcherID

Enzymatic characterization and molecular modeling of an evolutionarily interesting fungal beta-N-acetylhexosaminidase

Febs Journal
2011 | Journal article
DOI: 10.1111/j.1742-4658.2011.08173.x
WOSUID:

WOS:000292932700007
Contributors: Ryslava, Helena; Kalendova, Alzbeta; Doubnerova, Veronika; Skocdopol, Premysl; Kumar, Vinay; Kukacka, Zdenek; Pompach, Petr; Vanek, Ondrej; Slamova, Kristyna; Bojarova, Pavla et al.
Source: Self-asserted source
Petr Pompach via ResearcherID

Molecular architecture of mouse activating NKR-P1 receptors

Journal of Structural Biology
2011 | Journal article
DOI: 10.1016/j.jsb.2011.05.001
WOSUID:

WOS:000293807000019
Contributors: Kolenko, Petr; Rozbesky, Daniel; Vanek, Ondrej; Kopecky, Vladimir, Jr.; Hofbauerova, Katerina; Novak, Petr; Pompach, Petr; Hasek, Jindrich; Skalova, Tereza; Bezouska, Karel et al.
Source: Self-asserted source
Petr Pompach via ResearcherID

Down-regulation of Protein-tyrosine Phosphatases Activates an Immune Receptor in the Absence of Its Translocation into Lipid Rafts

Journal of Biological Chemistry
2010 | Journal article
DOI: 10.1074/jbc.M109.052555
WOSUID:

WOS:000276787800037
Contributors: Heneberg, Petr; Draberova, Lubica; Bambouskova, Monika; Pompach, Petr; Draber, Petr
Source: Self-asserted source
Petr Pompach via ResearcherID

Effective Removal of Nonionic Detergents in Protein Mass Spectrometry, Hydrogen/Deuterium Exchange, and Proteomics

Analytical Chemistry
2010 | Journal article
DOI: 10.1021/ac100171m
WOSUID:

WOS:000278616100035
Contributors: Rey, Martial; Mrazek, Hynek; Pompach, Petr; Novak, Petr; Pelosi, Ludovic; Brandolin, Gerard; Forest, Eric; Havlicek, Vladimir; Man, Petr
Source: Self-asserted source
Petr Pompach via ResearcherID

Fragmentation of Human Erythrocyte Actin following Exposure to Hypoxia

Acta Haematologica
2010 | Journal article
DOI: 10.1159/000256661
WOSUID:

WOS:000272340700002
Contributors: Risso, Angela; Santamaria, Barbara; Pistarino, Erika; Cosulich, Maria Elisabetta; Pompach, Petr; Bezouska, Karel; Antonutto, Guglielmo
Source: Self-asserted source
Petr Pompach via ResearcherID

Identification of Multiple Substrates of the StkP Ser/Thr Protein Kinase in Streptococcus pneumoniae

Journal of Bacteriology
2010 | Journal article
DOI: 10.1128/jb.01564-09
WOSUID:

WOS:000279183300008
Contributors: Novakova, Linda; Bezouskova, Silvia; Pompach, Petr; Spidlova, Petra; Saskova, Lenka; Weiser, Jaroslav; Branny, Pavel
Source: Self-asserted source
Petr Pompach via ResearcherID

Synthetic N-Acetyl-D-glucosamine Based Fully Branched Tetrasaccharide, a Mimetic of the Endogenous Ligand for CD69, Activates CD69(+) Killer Lymphocytes upon Dimerization via a Hydrophilic Flexible Linker (Retracted article. See vol. 57, pg. 5477, 2014)

Journal of Medicinal Chemistry
2010 | Journal article
DOI: 10.1021/jm100055b
WOSUID:

WOS:000277766900018
Contributors: Kovalova, Anna; Ledvina, Miroslav; Saman, David; Zyka, Daniel; Kubickova, Monika; Zidek, Lukas; Sklenar, Vladimir; Pompach, Petr; Kavan, Daniel; Bily, Jan et al.
Source: Self-asserted source
Petr Pompach via ResearcherID

The alpha-galactosidase type A gene aglA from Aspergillus niger encodes a fully functional alpha-N-acetylgalactosaminidase

Glycobiology
2010 | Journal article
DOI: 10.1093/glycob/cwq105
WOSUID:

WOS:000282750300009
Contributors: Kulik, Natallia; Weignerova, Lenka; Filipi, Tomas; Pompach, Petr; Novak, Petr; Mrazek, Hynek; Slamova, Kristyna; Bezouska, Karel; Kren, Vladimir; Ettrich, Ruediger
Source: Self-asserted source
Petr Pompach via ResearcherID

Modified electrophoretic and digestion conditions allow a simplified mass spectrometric evaluation of disulfide bonds

Journal of Mass Spectrometry
2009 | Journal article
DOI: 10.1002/jms.1609
WOSUID:

WOS:000272150300004
Contributors: Pompach, Petr; Man, Petr; Kavan, Daniel; Hofbauerova, Katerina; Kumar, Vinay; Bezouska, Karel; Havlicek, Vladimir; Novak, Petr
Source: Self-asserted source
Petr Pompach via ResearcherID

Utilization of high-accuracy FTICR-MS data in protein quantitation experiments

Journal of Mass Spectrometry
2009 | Journal article
DOI: 10.1002/jms.1602
WOSUID:

WOS:000272150300003
Contributors: Strohalm, Martin; Novak, Petr; Pompach, Petr; Man, Petr; Kavan, Daniel; Witt, Matthias; Dzubak, Petr; Hajduch, Marian; Havlicek, Vladimir
Source: Self-asserted source
Petr Pompach via ResearcherID

Purification and characterization of a nitrilase from Fusarium solani O1

Journal of Molecular Catalysis B-Enzymatic
2008 | Journal article
DOI: 10.1016/j.molcatb.2007.09.006
WOSUID:

WOS:000252487300009
Contributors: Vejvoda, Vojtech; Kaplan, Ondrej; Bezouska, Karel; Pompach, Petr; Sulc, Miroslav; Cantarella, Maria; Benada, Oldrich; Uhnakova, Bronislava; Rinagelova, Anna; Lutz-Wahl, Sabine et al.
Source: Self-asserted source
Petr Pompach via ResearcherID

Soluble recombinant CD69 receptors optimized to have an exceptional physical and chemical stability display prolonged circulation and remain intact in the blood of mice

Febs Journal
2008 | Journal article
DOI: 10.1111/j.1742-4658.2008.06683.x
WOSUID:

WOS:000260348600011
Contributors: Vanek, Ondrej; Nalezkova, Monika; Kavan, Daniel; Borovickova, Ivana; Pompach, Petr; Novak, Petr; Kumar, Vinay; Vannucci, Luca; Hudecek, Jiri; Hofbauerova, Katerina et al.
Source: Self-asserted source
Petr Pompach via ResearcherID

VDAC2 and aldolase A identified as membrane proteins of K562 cells with increased expression under iron deprivation

Molecular and Cellular Biochemistry
2008 | Journal article
DOI: 10.1007/s11010-008-9712-x
WOSUID:

WOS:000254204500025
Contributors: Valis, Karel; Neubauerova, Jitka; Man, Petr; Pompach, Petr; Vohradsky, Jiri; Kovar, Jan
Source: Self-asserted source
Petr Pompach via ResearcherID

Large propeptides of fungal beta-N-acetylhexosaminidases are novel enzyme regulators that must be intracellularly processed to control activity, dimerization, and secretion into the extracellular environment

Biochemistry
2007 | Journal article
DOI: 10.1021/bi061828m
WOSUID:

WOS:000244650100016
Contributors: Plihal, Ondrej; Sklenar, Jan; Hofbauerova, Katerina; Novak, Petr; Man, Petr; Pompach, Petr; Kavan, Daniel; Ryslava, Helena; Weignerova, Lenka; Charvatova-Pisvejcova, Andrea et al.
Source: Self-asserted source
Petr Pompach via ResearcherID

Structure of the dimeric N-glycosylated form of fungal beta-N-acetylhexosaminidase revealed by computer modeling, vibrational spectroscopy, and biochemical studies

Bmc Structural Biology
2007 | Journal article
DOI: 10.1186/1472-6807-7-32
WOSUID:

WOS:000247036500002
Contributors: Ettrich, Rudiger; Kopecky, Vladimir, Jr.; Hofbauerova, Katerina; Baumruk, Vladimir; Novak, Petr; Pompach, Petr; Man, Petr; Plihal, Ondrej; Kuty, Michal; Kulik, Natallia et al.
Source: Self-asserted source
Petr Pompach via ResearcherID

Purification and characterization of a nitrilase from Aspergillus niger K10

Applied Microbiology and Biotechnology
2006 | Journal article
DOI: 10.1007/s00253-006-0503-6
WOSUID:

WOS:000202987400011
Contributors: Kaplan, Ondrej; Vejvoda, Vojtech; Plihal, Ondrej; Pompach, Petr; Kavan, Daniel; Bojarova, Pavla; Bezouska, Karel; Mackova, Martina; Cantarella, Maria; Jirku, Vladimir et al.
Source: Self-asserted source
Petr Pompach via ResearcherID

A chemoenzymatic route to mannosamine derivatives bearing different N-acyl groups

Journal of Biotechnology
2005 | Journal article
DOI: 10.1016/j.jbiotec.2004.08.007
WOSUID:

WOS:000226632000005
Contributors: Kristova, V.; Martinkova, L.; Husakova, L.; Kuzma, M.; Rauvolfova, J.; Kavan, D.; Pompach, P.; Bezouska, K.; Kren, V.
Source: Self-asserted source
Petr Pompach via ResearcherID

Identification of signal transduction proteins in lymphocyte membrane microdomains

Molecular & Cellular Proteomics
2002 | Journal article
WOSUID:

BCI:BCI200300054540
Contributors: Pompach, Petr; Novak, Petr; Man, Petr; Havlicek, Vladimir; Bezouska, Karel
Source: Self-asserted source
Petr Pompach via ResearcherID
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