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Employment (3)

Institute of Urban Environment, Chinese Academy of Sciences: Xiamen, CN

Prof. Dr
Employment
Source: Self-asserted source
丽 崔

Oxford University: Oxford, GB

2015-07-15 to 2016-02-18 | Visiting scholar
Employment
Source: Self-asserted source
丽 崔

Lancaster University: Lancaster, Lancashire, GB

2015-02-15 to 2015-07-16 | Visiting scholar
Employment
Source: Self-asserted source
丽 崔

Education and qualifications (1)

Xiamen University: Xiamen, Fujian, CN

2002-09-05 to 2008-08-16 | PhD (Chemistry department)
Education
Source: Self-asserted source
丽 崔

Works (35)

Elevated Toxicity and High-Risk Impacts of Small Polycyclic Aromatic Hydrocarbon Clusters on Microbes Compared to Large Clusters

Environmental Science & Technology
2025-01-14 | Journal article
DOI: 10.1021/acs.est.4c10078
Contributors: Shuyue Zheng; Jihong Dong; Quan Chen; Min Wu; Dong Zhu; Li Cui; Philippe Frangois-Xavier Corvini; Hong-Zhe Li; Bo Pan
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Crossref

High-Throughput Single-Cell Metabolic Labeling, Sorting, and Sequencing of Active Antibiotic-Resistant Bacteria in the Environment

Environmental Science & Technology
2024-10-08 | Journal article
DOI: 10.1021/acs.est.4c02906
Contributors: Wenfang Lin; Ruilong Li; Shaoheng Cao; Hongzhe Li; Kai Yang; Zhugen Yang; Jianqiang Su; Yong-Guan Zhu; Li Cui
Source: check_circle
Crossref

Single-cell exploration of active phosphate-solubilizing bacteria across diverse soil matrices for sustainable phosphorus management

Nature Food
2024-08-05 | Journal article
DOI: 10.1038/s43016-024-01024-8
Contributors: Hong-Zhe Li; Jingjing Peng; Kai Yang; Yiyue Zhang; Qing-Lin Chen; Yong-Guan Zhu; Li Cui
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Crossref

Integrating Multiple Bacterial Phenotypes and Bayesian Network for Analyzing Health Risks of Pathogens in Plastisphere

Analytical Chemistry
2024-07-16 | Journal article
DOI: 10.1021/acs.analchem.4c01433
Contributors: Hong-Zhe Li; Wen-Jing Li; Zi-Jian Wang; Qing-Lin Chen; Mia Kristine Staal Jensen; Min Qiao; Li Cui
Source: check_circle
Crossref

MicrobioRaman: an open-access web repository for microbiological Raman spectroscopy data

Nature Microbiology
2024-05-07 | Journal article
DOI: 10.1038/s41564-024-01656-3
Contributors: Kang Soo Lee; Zachary Landry; Awais Athar; Uria Alcolombri; Pratchaya Pramoj Na Ayutthaya; David Berry; Philippe de Bettignies; Ji-Xin Cheng; Gabor Csucs; Li Cui et al.
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Crossref

Aerobic Anoxygenic Phototrophic Bacteria in the Marine Environments Revealed by Raman/Fluorescence-Guided Single-Cell Sorting and Targeted Metagenomics

Environmental Science & Technology
2024-04-23 | Journal article
DOI: 10.1021/acs.est.4c02881
Contributors: Lin Xu; Xiao-Lan Yue; Hong-Zhe Li; Shu-Ling Jian; Wen-Sheng Shu; Li Cui; Xue-Wei Xu
Source: check_circle
Crossref

Single-cell exploration of active microbiota in solubilizing fixed phosphorus in soils

2024-02-26 | Preprint
DOI: 10.21203/rs.3.rs-3931032/v1
Contributors: Yong-Guan Zhu; Hong-Zhe Li; JingJing Peng; Kai Yang; Yi-Yue Zhang; Qing-Lin Chen; Li Cui
Source: check_circle
Crossref

Patch-Based Convolutional Encoder: A Deep Learning Algorithm for Spectral Classification Balancing the Local and Global Information

Analytical Chemistry
2024-02-07 | Journal article
DOI: 10.1021/acs.analchem.3c03889
Contributors: Xin-Yu Lu; Chen-Yue Wang; Hui Tang; Yi-Fei Qin; Li Cui; Xiang Wang; Guo-Kun Liu; Bin Ren
Source: check_circle
Crossref

Nitrogen fixation and diazotroph diversity in groundwater systems

The ISME Journal
2023-11 | Journal article
DOI: 10.1038/s41396-023-01513-x
Contributors: Xiaohan Liu; Ping Li; Helin Wang; Li-Li Han; Kai Yang; Yanhong Wang; Zhou Jiang; Li Cui; Shuh-Ji Kao
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Crossref

Unraveling the Role of Microalgae in Mitigating Antibiotics and Antibiotic Resistance Genes in Photogranules Treating Antibiotic Wastewater

Environmental Science & Technology
2023-11-07 | Journal article
DOI: 10.1021/acs.est.3c04798
Contributors: Claude Kiki; Dan Qin; Lin Liu; Min Qiao; Bob Adyari; Binessi Edouard Ifon; Adenike B. E. Adeoye; Longji Zhu; Li Cui; Qian Sun
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Crossref

Quantifying health risks of plastisphere antibiotic resistome and deciphering driving mechanisms in an urbanizing watershed

Water Research
2023-10 | Journal article
DOI: 10.1016/j.watres.2023.120574
Contributors: Longji Zhu; Ruilong Li; Kai Yang; Fei Xu; Chenshuo Lin; Qinglin Chen; Dong Zhu; Qian Sun; Yong-Guan Zhu; Li Cui
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Crossref

Impact of Airborne Pathogen-Derived Extracellular Vesicles on Macrophages Revealed by Raman Spectroscopy and Multiomics

Environmental Science & Technology
2023-10-24 | Journal article
DOI: 10.1021/acs.est.3c04800
Contributors: Yifei Qin; Zheng Shi; Longji Zhu; Hongzhe Li; Wenjia Lu; Guozhu Ye; Qiansheng Huang; Li Cui
Source: check_circle
Crossref

Single‐cell Raman and functional gene analyses reveal microbial P solubilization in agriculture waste‐modified soils

mLife
2023-06 | Journal article
DOI: 10.1002/mlf2.12053
Contributors: Hongzhe Li; Jiazhi Ding; Longji Zhu; Fei Xu; Wenjing Li; Yanpo Yao; Li Cui
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Crossref

An Isotope‐Labeled Single‐Cell Raman Spectroscopy Approach for Tracking the Physiological Evolution Trajectory of Bacteria toward Antibiotic Resistance

Angewandte Chemie
2023-03-27 | Journal article
DOI: 10.1002/ange.202217412
Contributors: Kai Yang; Fei Xu; Longji Zhu; Hongzhe Li; Qian Sun; Aixin Yan; Bin Ren; Yong‐Guan Zhu; Li Cui
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Crossref

An Isotope‐Labeled Single‐Cell Raman Spectroscopy Approach for Tracking the Physiological Evolution Trajectory of Bacteria toward Antibiotic Resistance

Angewandte Chemie International Edition
2023-03-27 | Journal article
DOI: 10.1002/anie.202217412
Contributors: Kai Yang; Fei Xu; Longji Zhu; Hongzhe Li; Qian Sun; Aixin Yan; Bin Ren; Yong‐Guan Zhu; Li Cui
Source: check_circle
Crossref

Live tracking metabolic networks and physiological responses within microbial assemblages at single-cell level

PNAS Nexus
2023-03-03 | Journal article
DOI: 10.1093/pnasnexus/pgad006
Contributors: Li Cui; Yuhan Xin; Kai Yang; Hongzhe Li; Fengjiao Tan; Yulong Zhang; Xingrui Li; Zhi Zhu; Jun Yang; Shuh-Ji Kao et al.
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Crossref

Denitrification and N2O Emission in Estuarine Sediments in Response to Ocean Acidification: From Process to Mechanism

Environmental Science & Technology
2022-10-18 | Journal article
DOI: 10.1021/acs.est.2c03550
Contributors: Xiaoxuan Su; Li Cui; Yijia Tang; Teng Wen; Kai Yang; Yingmu Wang; Jinbo Zhang; Guibing Zhu; Xiaoru Yang; Lijun Hou et al.
Source: check_circle
Crossref

Active antibiotic resistome in soils unraveled by single-cell isotope probing and targeted metagenomics

Proceedings of the National Academy of Sciences
2022-10-04 | Journal article
DOI: 10.1073/pnas.2201473119
Contributors: Hong-Zhe Li; Kai Yang; Hu Liao; Simon Bo Lassen; Jian-Qiang Su; Xian Zhang; Li Cui; Yong-Guan Zhu
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Crossref

Deep Learning-Enabled Raman Spectroscopic Identification of Pathogen-Derived Extracellular Vesicles and the Biogenesis Process

Analytical Chemistry
2022-09-13 | Journal article
DOI: 10.1021/acs.analchem.2c02226
Contributors: Yi-Fei Qin; Xin-Yu Lu; Zheng Shi; Qian-Sheng Huang; Xiang Wang; Bin Ren; Li Cui
Source: check_circle
Crossref

Widespread of Potential Pathogen-Derived Extracellular Vesicles Carrying Antibiotic Resistance Genes in Indoor Dust

Environmental Science & Technology
2022-05-03 | Journal article
DOI: 10.1021/acs.est.1c08654
Contributors: Yifei Qin; Zihan Guo; Haining Huang; Liting Zhu; Sijun Dong; Yong-Guan Zhu; Li Cui; Qiansheng Huang
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Crossref

Raman biosensor and molecular tools for integrated monitoring of pathogens and antimicrobial resistance in wastewater

TrAC Trends in Analytical Chemistry
2021-10 | Journal article
DOI: 10.1016/j.trac.2021.116415
Contributors: Li Cui; Hong-Zhe Li; Kai Yang; Long-Ji Zhu; Fei Xu; Yong-Guan Zhu
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Crossref

Impact of Urbanization on Antibiotic Resistome in Different Microplastics: Evidence from a Large-Scale Whole River Analysis

Environmental Science & Technology
2021-07-06 | Journal article
DOI: 10.1021/acs.est.1c01395
Contributors: Ruilong Li; Longji Zhu; Kai Yang; Hongzhe Li; Yong-Guan Zhu; Li Cui
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Crossref

Potential of indigenous crop microbiomes for sustainable agriculture

Nature Food
2021-04-21 | Journal article
DOI: 10.1038/s43016-021-00253-5
Contributors: Qing-Lin Chen; Hang-Wei Hu; Zi-Yang He; Li Cui; Yong-Guan Zhu; Ji-Zheng He
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Crossref

Long-Term Fertilization History Alters Effects of Microplastics on Soil Properties, Microbial Communities, and Functions in Diverse Farmland Ecosystem

Environmental Science & Technology
2021-04-20 | Journal article
DOI: 10.1021/acs.est.0c04849
Contributors: Hong-Zhe Li; Dong Zhu; Jonathan Hessner Lindhardt; Shao-Min Lin; Xin Ke; Li Cui
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Crossref

Phenotypic Tracking of Antibiotic Resistance Spread via Transformation from Environment to Clinic by Reverse D2O Single-Cell Raman Probing

Analytical Chemistry
2020-12-01 | Journal article
DOI: 10.1021/acs.analchem.0c03218
Contributors: Hong-Zhe Li; DanDan Zhang; Kai Yang; Xin-Li An; Qiang Pu; Shao-Min Lin; Jian-Qiang Su; Li Cui
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Crossref

Temporal Dynamics of Antibiotic Resistome in the Plastisphere during Microbial Colonization

Environmental Science & Technology
2020-09-15 | Journal article
DOI: 10.1021/acs.est.0c04292
Contributors: Kai Yang; Qing-Lin Chen; Mo-Lian Chen; Hong-Zhe Li; Hu Liao; Qiang Pu; Yong-Guan Zhu; Li Cui
Source: check_circle
Crossref

Perspective on Surface-Enhanced Raman Spectroscopic Investigation of Microbial World

Analytical Chemistry
2019-12-17 | Journal article
DOI: 10.1021/acs.analchem.9b03996
Contributors: Li Cui; DanDan Zhang; Kai Yang; Xian Zhang; Yong-Guan Zhu
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Crossref

Fate of Labile Organic Carbon in Paddy Soil Is Regulated by Microbial Ferric Iron Reduction

Environmental Science & Technology
2019-08-06 | Journal article
DOI: 10.1021/acs.est.9b01323
Contributors: Jian-Xin Xu; Xiao-Ming Li; Guo-Xin Sun; Li Cui; Long-Jun Ding; Chen He; Li-Guan Li; Quan Shi; Barth F. Smets; Yong-Guan Zhu
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Crossref

Rapid Antibiotic Susceptibility Testing of Pathogenic Bacteria Using Heavy-Water-Labeled Single-Cell Raman Spectroscopy in Clinical Samples

Analytical Chemistry
2019-05-07 | Journal article
DOI: 10.1021/acs.analchem.9b01064
Contributors: Kai Yang; Hong-Zhe Li; Xuan Zhu; Jian-Qiang Su; Bin Ren; Yong-Guan Zhu; Li Cui
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Crossref

Heavy water-labeled Raman spectroscopy reveals carboxymethylcellulose-degrading bacteria and degradation activity at the single-cell level

Applied Microbiology and Biotechnology
2019-02-07 | Journal article
DOI: 10.1007/s00253-018-9459-6
Contributors: Oladipo Oladiti Olaniyi; Kai Yang; Yong-Guan Zhu; Li Cui
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Crossref

D2O-Isotope-Labeling Approach to Probing Phosphate-Solubilizing Bacteria in Complex Soil Communities by Single-Cell Raman Spectroscopy

Analytical Chemistry
2019-02-05 | Journal article
DOI: 10.1021/acs.analchem.8b04820
Contributors: Hong-Zhe Li; Qing-fang Bi; Kai Yang; Bang-Xiao Zheng; Qiang Pu; Li Cui
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Crossref

Response to Comment on “Application of Struvite Alters the Antibiotic Resistome in Soil, Rhizosphere, and Phyllosphere”

Environmental Science & Technology
2018-12-18 | Journal article
DOI: 10.1021/acs.est.8b06203
Contributors: Qing-Lin Chen; Yong-Guan Zhu; Li Cui
Source: check_circle
Crossref

Functional Single-Cell Approach to Probing Nitrogen-Fixing Bacteria in Soil Communities by Resonance Raman Spectroscopy with 15N2 Labeling

Analytical Chemistry
2018-04-17 | Journal article
DOI: 10.1021/acs.analchem.7b05080
Contributors: Li Cui; Kai Yang; Hong-Zhe Li; Han Zhang; Jian-Qiang Su; Maria Paraskevaidi; Francis L. Martin; Bin Ren; Yong-Guan Zhu
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Crossref

Application of Struvite Alters the Antibiotic Resistome in Soil, Rhizosphere, and Phyllosphere

Environmental Science & Technology
2017-07-18 | Journal article
DOI: 10.1021/acs.est.7b01420
Contributors: Qing-Lin Chen; Xin-Li An; Yong-Guan Zhu; Jian-Qiang Su; Michael R. Gillings; Zhi-Long Ye; Li Cui
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Crossref

Surface-Enhanced Raman Spectroscopy Combined with Stable Isotope Probing to Monitor Nitrogen Assimilation at Both Bulk and Single-Cell Level

Analytical Chemistry
2017-06-06 | Journal article
DOI: 10.1021/acs.analchem.6b04913
Contributors: Li Cui; Kai Yang; Guowei Zhou; Wei E. Huang; Yong-Guan Zhu
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Crossref

Peer review (49 reviews for 6 publications/grants)

Review activity for ACS applied materials & interfaces. (1)
Review activity for Advanced healthcare materials (1)
Review activity for Analytical chemistry. (33)
Review activity for Environmental science & technology. (12)
Review activity for Langmuir : (1)
Review activity for Water research. (1)
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