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ResearcherID: G-7798-2012
Scopus Author ID: 7102012562

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Oulun yliopisto: Oulu, Pohjois-Pohjanmaa, FI

2016-07-01 to present | professor, vice-head (Research Unit of Health Sciences and Technology)
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Miika T. Nieminen

Works (50 of 185)

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Melting of aqueous NaCl solutions in porous materials: shifted phase transition distribution (SIDI) approach for determining NMR cryoporometry pore size distributions

Physical Chemistry Chemical Physics
2024 | Journal article
DOI: 10.1039/D3CP04029A
Contributors: Sarah E. Mailhiot; Katja Tolkkinen; Henning Henschel; Jiří Mareš; Matti Hanni; Miika T. Nieminen; Ville-Veikko Telkki
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Imaging phenotype evaluation from digital breast tomosynthesis data: A preliminary study

Computers in Biology and Medicine
2024-12 | Journal article
DOI: 10.1016/j.compbiomed.2024.109285
Contributors: Antti Isosalo; Satu I. Inkinen; Lucia Prostredná; Helinä Heino; Pieta S. Ipatti; Jarmo Reponen; Miika T. Nieminen
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Anisotropy of T2 and T1ρ relaxation time in articular cartilage at 3 T

Magnetic Resonance in Medicine
2024-09 | Journal article
DOI: 10.1002/mrm.30096
Contributors: Ville Kantola; Jouni Karjalainen; Tomi Jaakola; Henri P. P. Leskinen; Mikko J. Nissi; Victor Casula; Miika T. Nieminen
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External Focus of Attention Reduces Cartilage Load During Drop Landings

Scandinavian Journal of Medicine & Science in Sports
2024-09 | Journal article
DOI: 10.1111/sms.14718
Contributors: Lukáš Slovák; Egor Panfilov; David Zahradník; Victor Casula; Miika T. Nieminen; William M. Land; Takehiro Iwatsuki; Reza Abdollahipour
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Does T1ρ Measure Proteoglycan Concentration in Cartilage?

Journal of Magnetic Resonance Imaging
2024-05 | Journal article
DOI: 10.1002/jmri.28981
Contributors: Victor Casula; Jouni Karjalainen; Vladimir Mlynarik; Timo Liimatainen; Matti Hanni; Edwin H.G. Oei; Mikko J. Nissi; Miika T. Nieminen
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If you can make it, you can share it – Perspectives on the first DIY-fair at the European congress of medical physics (ECMP, DUBLIN 2022)

Physica Medica
2024-02 | Journal article
DOI: 10.1016/j.ejmp.2024.103214
Contributors: Miika T. Nieminen; Irene Hernandez-Giron; Jonas S. Andersson
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Deep learning enables time-efficient soft tissue enhancement in CBCT: Proof-of-concept study for dentomaxillofacial applications

Physica Medica
2024-01 | Journal article
DOI: 10.1016/j.ejmp.2023.103184
Contributors: Sampo Ylisiurua; Annina Sipola; Miika T. Nieminen; Mikael A.K. Brix
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SPICY: a method for single scan rotating frame relaxometry

Physical Chemistry Chemical Physics
2023 | Journal article
DOI: 10.1039/D2CP05988F
Contributors: Katja Tolkkinen; Sarah E. Mailhiot; Anne Selent; Otto Mankinen; Henning Henschel; Miika T. Nieminen; Matti Hanni; Anu M. Kantola; Timo Liimatainen; Ville-Veikko Telkki
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Deep‐Learning‐Based Contrast Synthesis From MRF Parameter Maps in the Knee Joint

Journal of Magnetic Resonance Imaging
2023-08 | Journal article
DOI: 10.1002/jmri.28573
Contributors: Olli Nykänen; Mika Nevalainen; Victor Casula; Antti Isosalo; Satu I. Inkinen; Marko Nikki; Riccardo Lattanzi; Martijn A. Cloos; Mikko J. Nissi; Miika T. Nieminen
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Independent evaluation of a multi-view multi-task convolutional neural network breast cancer classification model using Finnish mammography screening data

Computers in Biology and Medicine
2023-07 | Journal article
DOI: 10.1016/j.compbiomed.2023.107023
Contributors: A. Isosalo; S.I. Inkinen; T. Turunen; P.S. Ipatti; J. Reponen; M.T. Nieminen
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Effects of a 360° virtual counselling environment on patient anxiety and CCTA process time: A randomised controlled trial

Radiography
2023-05 | Journal article
DOI: 10.1016/j.radi.2022.09.013
Contributors: Karoliina Paalimäki-Paakki; Mari Virtanen; Anja Henner; Hannu Vähänikkilä; Miika T. Nieminen; Tanja Schroderus-Salo; Maria Kääriäinen
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Machine Learning Prediction of Collagen Fiber Orientation and Proteoglycan Content From Multiparametric Quantitative MRI in Articular Cartilage

Journal of Magnetic Resonance Imaging
2023-04 | Journal article
DOI: 10.1002/jmri.28353
Contributors: Seyed Amir Mirmojarabian; Abdul Wahed Kajabi; Juuso H. J. Ketola; Olli Nykänen; Timo Liimatainen; Miika T. Nieminen; Mikko J. Nissi; Victor Casula
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Assessing post-traumatic changes in cartilage using T<sub>1ρ</sub> dispersion parameters.

Magnetic resonance imaging
2023-01 | Journal article
DOI: 10.1016/j.mri.2022.12.012
PMID: 36610648
Contributors: Elsayed H; Karjalainen J; Nissi MJ; Ketola J; Kajabi AW; Casula V; Zbýň Š; Nieminen MT; Hanni M
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Miika T. Nieminen via Europe PubMed Central
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Evaluation of different convolutional neural network encoder-decoder architectures for breast mass segmentation

Progress in Biomedical Optics and Imaging - Proceedings of SPIE
2022 | Conference paper
DOI: 10.1117/12.2628190
EID:

2-s2.0-85132031899

Part of ISSN: 16057422
Contributors: Isosalo, A.; Mustonen, H.; Turunen, T.; Ipatti, P.S.; Reponen, J.; Nieminen, M.T.; Inkinen, S.I.
Source: Self-asserted source
Miika T. Nieminen via Scopus - Elsevier

Predicting Knee Osteoarthritis Progression from Structural MRI Using Deep Learning

Proceedings - International Symposium on Biomedical Imaging
2022 | Conference paper
DOI: 10.1109/ISBI52829.2022.9761458
EID:

2-s2.0-85129615570

Part of ISSN: 19458452 19457928
Contributors: Panfilov, E.; Saarakkala, S.; Nieminen, M.T.; Tiulpin, A.
Source: Self-asserted source
Miika T. Nieminen via Scopus - Elsevier

PREDICTING KNEE OSTEOARTHRITIS PROGRESSION FROM STRUCTURAL MRI USING DEEP LEARNING

arXiv
2022 | Other
EID:

2-s2.0-85123977396

Part of ISSN: 23318422
Contributors: Panfilov, E.; Saarakkala, S.; Nieminen, M.T.; Tiulpin, A.
Source: Self-asserted source
Miika T. Nieminen via Scopus - Elsevier

Relaxation anisotropy of quantitative MRI parameters in biological tissues

ResearchSquare
2022 | Other
DOI: 10.21203/rs.3.rs-1576057
EID:

2-s2.0-85134089697
Contributors: Hänninen, N.E.; Liimatainen, T.; Hanni, M.; Gröhn, O.; Nieminen, M.T.; Nissi, M.J.
Source: Self-asserted source
Miika T. Nieminen via Scopus - Elsevier

Unsupervised denoising for sparse multi-spectral computed tomography

arXiv
2022 | Other
DOI: 10.48550/arXiv.2211.01159
EID:

2-s2.0-85142792094

Part of ISSN: 23318422
Contributors: Inkinen, S.I.; Brix, M.A.K.; Nieminen, M.T.; Arridge, S.; Hauptmann, A.
Source: Self-asserted source
Miika T. Nieminen via Scopus - Elsevier

Predicting osteoarthritis onset and progression with 3D texture analysis of cartilage MRI DESS: 6‐Year data from osteoarthritis initiative

Journal of Orthopaedic Research
2022-11 | Journal article
DOI: 10.1002/jor.25293
Contributors: Ari Väärälä; Victor Casula; Arttu Peuna; Egor Panfilov; Ali Mobasheri; Marianne Haapea; Eveliina Lammentausta; Miika T. Nieminen
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The KNee OsteoArthritis Prediction (KNOAP2020) challenge: An image analysis challenge to predict incident symptomatic radiographic knee osteoarthritis from MRI and X-ray images.

Osteoarthritis and cartilage
2022-10 | Journal article
DOI: 10.1016/j.joca.2022.10.001
PMID: 36243308
Contributors: Hirvasniemi J; Runhaar J; van der Heijden RA; Zokaeinikoo M; Yang M; Li X; Tan J; Rajamohan HR; Zhou Y; Deniz CM et al.
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Miika T. Nieminen via Europe PubMed Central
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Relaxation anisotropy of quantitative MRI parameters in biological tissues.

Scientific reports
2022-07 | Journal article
DOI: 10.1038/s41598-022-15773-8
PMID: 35840627
PMC: PMC9287339
Contributors: Hänninen NE; Liimatainen T; Hanni M; Gröhn O; Nieminen MT; Nissi MJ
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Miika T. Nieminen via Europe PubMed Central
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Myocardium Assessment by Relaxation along Fictitious Field, Extracellular Volume, Feature Tracking, and Myocardial Strain in Hypertensive Patients with Left Ventricular Hypertrophy.

International journal of biomedical imaging
2022-06 | Journal article
DOI: 10.1155/2022/9198691
PMID: 35782296
PMC: PMC9246602
Contributors: Mirmojarabian SA; Lammentausta E; Liukkonen E; Ahvenjärvi L; Junttila J; Nieminen MT; Liimatainen T
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Miika T. Nieminen via Europe PubMed Central
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Compositional MRI of articular cartilage — current status and the way forward

Osteoarthritis and Cartilage
2022-05 | Journal article
DOI: 10.1016/j.joca.2022.01.006
Contributors: M.T. Nieminen; V. Casula; M.J. Nissi
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Quantitative evaluation of the tibiofemoral joint cartilage by T2 mapping in patients with acute anterior cruciate ligament injury vs contralateral knees: results from the subacute phase using data from the NACOX study cohort.

Osteoarthritis and cartilage
2022-04 | Journal article
DOI: 10.1016/j.joca.2022.02.623
PMID: 35421548
Contributors: Casula V; Tajik BE; Kvist J; Frobell R; Haapea M; Nieminen MT; Gauffin H; Englund M
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Miika T. Nieminen via Europe PubMed Central
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Relaxation anisotropy of quantitative MRI parameters in biological tissues

2022-04 | Preprint
DOI: 10.21203/rs.3.rs-1576057/v1
PPR: PPR486217
Contributors: Hänninen NE; Liimatainen T; Hanni M; Gröhn O; Nieminen MT; Nissi MJ
Source: Self-asserted source
Miika T. Nieminen via Europe PubMed Central

Dipolar Relaxation of Water Protons in the Vicinity of a Collagen-like Peptide.

The journal of physical chemistry. B
2022-03 | Journal article
DOI: 10.1021/acs.jpcb.2c00052
PMID: 35343227
PMC: PMC8996236
Contributors: Karjalainen J; Henschel H; Nissi MJ; Nieminen MT; Hanni M
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Miika T. Nieminen via Europe PubMed Central
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Three Professional Singers' Vocal Tract Dimensions in Operatic Singing, Kulning, and Edge-A Multiple Case Study Examining Loud Singing.

Journal of voice : official journal of the Voice Foundation
2022-03 | Journal article
DOI: 10.1016/j.jvoice.2022.01.024
PMID: 35277318
Contributors: Ikävalko T; Laukkanen AM; McAllister A; Eklund R; Lammentausta E; Leppävuori M; Nieminen MT
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Miika T. Nieminen via Europe PubMed Central
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Effectiveness of Digital Counseling Environments on Anxiety, Depression, and Adherence to Treatment Among Patients Who Are Chronically Ill: Systematic Review

Journal of Medical Internet Research
2022-01-06 | Journal article
DOI: 10.2196/30077
Contributors: Karoliina Paalimäki-Paakki; Mari Virtanen; Anja Henner; Miika T Nieminen; Maria Kääriäinen
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Virtual monochromatic imaging reduces beam hardening artefacts in cardiac interior photon counting computed tomography: a phantom study with cadaveric specimens

Biomedical Physics & Engineering Express
2022-01-01 | Journal article
DOI: 10.1088/2057-1976/ac4397
Contributors: Satu I Inkinen; Mikael A K Juntunen; Juuso Ketola; Kristiina Korhonen; Pasi Sepponen; Antti Kotiaho; Vesa-Matti Pohjanen; Miika Nieminen
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Automated detection of patellofemoral osteoarthritis from knee lateral view radiographs using deep learning: Data from the Multicenter Osteoarthritis Study (MOST)

arXiv
2021 | Other
EID:

2-s2.0-85101241428

Part of ISSN: 23318422
Contributors: Bayramoglu, N.; Nieminen, M.T.; Saarakkala, S.
Source: Self-asserted source
Miika T. Nieminen via Scopus - Elsevier

Deep learning-based sinogram extension method for interior computed tomography

Progress in Biomedical Optics and Imaging - Proceedings of SPIE
2021 | Conference paper
DOI: 10.1117/12.2580886
EID:

2-s2.0-85103695001

Part of ISSN: 16057422
Contributors: Ketola, J.H.J.; Heino, H.; Juntunen, M.A.K.; Nieminen, M.T.; Inkinen, S.I.
Source: Self-asserted source
Miika T. Nieminen via Scopus - Elsevier

Machine learning based texture analysis of patella from X-rays for detecting patellofemoral osteoarthritis

arXiv
2021 | Other
EID:

2-s2.0-85108640235

Part of ISSN: 23318422
Contributors: Bayramoglu, N.; Nieminen, M.T.; Saarakkala, S.
Source: Self-asserted source
Miika T. Nieminen via Scopus - Elsevier

T2‐weighted magnetic resonance imaging texture as predictor of low back pain: A texture analysis‐based classification pipeline to symptomatic and asymptomatic cases

Journal of Orthopaedic Research
2021-11 | Journal article
DOI: 10.1002/jor.24973
Contributors: Juuso H. J. Ketola; Satu I. Inkinen; Jaro Karppinen; Jaakko Niinimäki; Osmo Tervonen; Miika T. Nieminen
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Generative adversarial networks improve interior computed tomography angiography reconstruction

Biomedical Physics & Engineering Express
2021-11-01 | Journal article
DOI: 10.1088/2057-1976/ac31cb
Contributors: Juuso H J Ketola; Helinä Heino; Mikael A K Juntunen; Miika T Nieminen; Samuli Siltanen; Satu I Inkinen
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Machine learning based texture analysis of patella from X-rays for detecting patellofemoral osteoarthritis.

International journal of medical informatics
2021-10 | Journal article
DOI: 10.1016/j.ijmedinf.2021.104627
PMID: 34773800
Contributors: Bayramoglu N; Nieminen MT; Saarakkala S
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Miika T. Nieminen via Europe PubMed Central
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Deep learning-based segmentation of knee MRI for fully automatic subregional morphological assessment of cartilage tissues: Data from the Osteoarthritis Initiative.

Journal of orthopaedic research : official publication of the Orthopaedic Research Society
2021-08 | Journal article
DOI: 10.1002/jor.25150
PMID: 34324223
Contributors: Panfilov E; Tiulpin A; Nieminen MT; Saarakkala S; Casula V
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Miika T. Nieminen via Europe PubMed Central
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Automated detection of patellofemoral osteoarthritis from knee lateral view radiographs using deep learning: data from the Multicenter Osteoarthritis Study (MOST).

Osteoarthritis and cartilage
2021-07 | Journal article
DOI: 10.1016/j.joca.2021.06.011
PMID: 34245873
Contributors: Bayramoglu N; Nieminen MT; Saarakkala S
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Miika T. Nieminen via Europe PubMed Central
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Functional and structural properties of human patellar articular cartilage in osteoarthritis.

Journal of biomechanics
2021-07 | Journal article
DOI: 10.1016/j.jbiomech.2021.110634
PMID: 34454206
Contributors: Nissinen MT; Hänninen N; Prakash M; Mäkelä JTA; Nissi MJ; Töyräs J; Nieminen MT; Korhonen RK; Tanska P
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Miika T. Nieminen via Europe PubMed Central
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Orientation anisotropy of quantitative MRI parameters in degenerated human articular cartilage

Journal of Orthopaedic Research
2021-04 | Journal article
DOI: 10.1002/jor.24778
Contributors: Nina Elina Hänninen; Olli Nykänen; Mithilesh Prakash; Matti Hanni; Miika Tapio Nieminen; Mikko Johannes Nissi
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Effectiveness of Digital Counseling Environments on Anxiety, Depression, and Adherence to Treatment Among Patients Who Are Chronically Ill: Systematic Review (Preprint)

2021-04-30 | Preprint
DOI: 10.2196/preprints.30077
Contributors: Karoliina Paalimäki-Paakki; Mari Virtanen; Anja Henner; Miika T Nieminen; Maria Kääriäinen
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Optimizing iterative reconstruction for quantification of calcium hydroxyapatite with photon counting flat-detector computed tomography: a cardiac phantom study.

Journal of medical imaging (Bellingham, Wash.)
2021-03 | Journal article
DOI: 10.1117/1.jmi.8.5.052102
PMID: 33718518
PMC: PMC7946398
Contributors: Juntunen MAK; Kotiaho AO; Nieminen MT; Inkinen SI
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Miika T. Nieminen via Europe PubMed Central
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Quantitative dual contrast photon-counting computed tomography for assessment of articular cartilage health.

Scientific reports
2021-03 | Journal article
DOI: 10.1038/s41598-021-84800-x
PMID: 33692379
PMC: PMC7946949
Contributors: Paakkari P; Inkinen SI; Honkanen MKM; Prakash M; Shaikh R; Nieminen MT; Grinstaff MW; Mäkelä JTA; Töyräs J; Honkanen JTJ
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Miika T. Nieminen via Europe PubMed Central
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Machine learning classification on texture analyzed T2 maps of osteoarthritic cartilage: oulu knee osteoarthritis study.

Osteoarthritis and cartilage
2021-02 | Journal article
DOI: 10.1016/j.joca.2021.02.561
PMID: 33631317
Contributors: Peuna A; Thevenot J; Saarakkala S; Nieminen MT; Lammentausta E
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Miika T. Nieminen via Europe PubMed Central
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A Lightweight CNN and Joint Shape-Joint Space ($$JS^2$$ ) Descriptor for Radiological Osteoarthritis Detection

Communications in Computer and Information Science
2020 | Book
DOI: 10.1007/978-3-030-52791-4_26
EID:

2-s2.0-85088595687

Part of ISSN: 18650937 18650929
Contributors: Bayramoglu, N.; Nieminen, M.T.; Saarakkala, S.
Source: Self-asserted source
Miika T. Nieminen via Scopus - Elsevier

A Lightweight CNN and Joint Shape-Joint Space (JS<sup>2</sup>) Descriptor for Radiological Osteoarthritis Detection

arXiv
2020 | Other
EID:

2-s2.0-85094738464

Part of ISSN: 23318422
Contributors: Bayramoglu, N.; Nieminen, M.T.; Saarakkala, S.
Source: Self-asserted source
Miika T. Nieminen via Scopus - Elsevier

Calibration method and photon flux influences tiled flat-panel photon counting detector image uniformity in computed tomography

Journal of Instrumentation
2020 | Journal article
DOI: 10.1088/1748-0221/15/08/T08005
EID:

2-s2.0-85090910921

Part of ISSN: 17480221
Contributors: Inkinen, S.I.; Juntunen, M.A.K.; Kotiaho, A.; Nieminen, M.T.
Source: Self-asserted source
Miika T. Nieminen via Scopus - Elsevier

Running and Physical Activity in an Air-Polluted Environment: The Biomechanical and Musculoskeletal Protocol for a Prospective Cohort Study 4HAIE (Healthy Aging in Industrial Environment-Program 4).

International journal of environmental research and public health
2020-12 | Journal article
DOI: 10.3390/ijerph17239142
PMID: 33297585
PMC: PMC7730319
Contributors: Jandacka D; Uchytil J; Zahradnik D; Farana R; Vilimek D; Skypala J; Urbaczka J; Plesek J; Motyka A; Blaschova D et al.
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Miika T. Nieminen via Europe PubMed Central
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Air gap technique is recommended in axiolateral hip radiographs

Journal of Applied Clinical Medical Physics
2020-10 | Journal article
DOI: 10.1002/acm2.13021
Contributors: Susanne Kivistö; Antti Kotiaho; Anja Henner; Terhi Nevala; Jaakko Niinimäki; Miika T. Nieminen; Matti Hanni
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Patients', radiographers' and radiography students' experiences of 360° virtual counselling environment for the coronary computed tomography angiography: A qualitative study.

Radiography (London, England : 1995)
2020-10 | Journal article
DOI: 10.1016/j.radi.2020.09.019
PMID: 33046372
Contributors: Paalimäki-Paakki K; Virtanen M; Henner A; Nieminen MT; Kääriäinen M
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Miika T. Nieminen via Europe PubMed Central
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Interior photon counting computed tomography for quantification of coronary artery calcium: pre-clinical phantom study

Biomedical Physics & Engineering Express
2020-09-01 | Journal article
DOI: 10.1088/2057-1976/aba133
Contributors: Mikael A K Juntunen; Pasi Sepponen; Kristiina Korhonen; Vesa-Matti Pohjanen; Juuso Ketola; Antti Kotiaho; Miika T Nieminen; Satu I Inkinen
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Peer review (3 reviews for 2 publications/grants)

Review activity for Nature reviews. (1)
Review activity for Osteoarthritis and cartilage (2)
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