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Scopus Author ID: 7006631122
SciProfiles: 1562804

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Works (42)

Association of Altered Plasma Lipidome with Disease Severity in COVID-19 Patients

Biomolecules
2024-03 | Journal article | Author
DOI: 10.3390/biom14030296
Contributors: Zhengzheng Zhang; Naama Karu; Alida Kindt; Madhulika Singh; Lieke Lamont-de Vries; Adriaan J. van Gammeren; Anton A. M. Ermens; Amy Harms; Lutzen Portengen; Roel C. H. Vermeulen et al.
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Multidisciplinary Digital Publishing Institute

Status of Metabolomic Measurement for Insights in Alzheimer’s Disease Progression—What Is Missing?

International Journal of Molecular Sciences
2023-03 | Journal article | Author
DOI: 10.3390/ijms24054960
Contributors: Chunyuan Yin; Amy Harms; Thomas Hankemeier; Alida Kindt; Helga de Vries
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Multidisciplinary Digital Publishing Institute

Flavor Profiling Using Comprehensive Mass Spectrometry Analysis of Metabolites in Tomato Soups

Metabolites
2022-11 | Journal article | Author
DOI: 10.3390/metabo12121194
Contributors: Simon Leygeber; Justus L. Grossmann; Carmen Diez-Simon; Naama Karu; Anne-Charlotte Dubbelman; Amy Harms; Johan Westerhuis; Doris M. Jacobs; Peter W. Lindenburg; Margriet Hendriks et al.
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Multidisciplinary Digital Publishing Institute

A Sample Preparation Method for the Simultaneous Profiling of Signaling Lipids and Polar Metabolites in Small Quantities of Muscle Tissues from a Mouse Model for Sarcopenia

Metabolites
2022-08 | Journal article | Author
DOI: 10.3390/metabo12080742
Contributors: Yupeng He; Marlien van Mever; Wei Yang; Luojiao Huang; Rawi Ramautar; Yvonne Rijksen; W.P. Vermeij; Jan H. J. Hoeijmakers; Amy Harms; Peter W. Lindenburg et al.
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Multidisciplinary Digital Publishing Institute

Plasma Oxylipins and Their Precursors Are Strongly Associated with COVID-19 Severity and with Immune Response Markers

Metabolites
2022-07 | Journal article | Author
DOI: 10.3390/metabo12070619
Contributors: Naama Karu; Alida Kindt; Lieke Lamont; Adriaan J. van Gammeren; Anton A. M. Ermens; Amy Harms; Lutzen Portengen; Roel C. H. Vermeulen; Willem A. Dik; Anton W Langerak et al.
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Multidisciplinary Digital Publishing Institute

Severe COVID-19 Is Characterised by Perturbations in Plasma Amines Correlated with Immune Response Markers, and Linked to Inflammation and Oxidative Stress

Metabolites
2022-07 | Journal article | Author
DOI: 10.3390/metabo12070618
Contributors: Naama Karu; Alida Kindt; Adriaan J. van Gammeren; Anton A. M. Ermens; Amy Harms; Lutzen Portengen; Roel C. H. Vermeulen; Willem A. Dik; Anton W Langerak; Vincent van der Velden et al.
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Multidisciplinary Digital Publishing Institute

Heritability of Urinary Amines, Organic Acids, and Steroid Hormones in Children

Metabolites
2022-05 | Journal article | Author
DOI: 10.3390/metabo12060474
Contributors: Fiona A. Hagenbeek; Jenny van Dongen; René Pool; Amy Harms; Peter J. Roetman; Vassilios Fanos; Britt van Keulen; Brian R. Walker; Naama Karu; Hilleke E. Hulshoff Pol et al.
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Multidisciplinary Digital Publishing Institute

Systematic Evaluation of HILIC Stationary Phases for Global Metabolomics of Human Plasma

Metabolites
2022-02 | Journal article | Author
DOI: 10.3390/metabo12020165
Contributors: Farideh Hosseinkhani; Luojiao Huang; Anne-Charlotte Dubbelman; Faisa Guled; Amy Harms; Thomas Hankemeier
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Multidisciplinary Digital Publishing Institute

Towards Standards for Human Fecal Sample Preparation in Targeted and Untargeted LC-HRMS Studies

Metabolites
2021-06 | Journal article | Author
DOI: 10.3390/metabo11060364
Contributors: Farideh Hosseinkhani; Anne-Charlotte Dubbelman; Naama Karu; Amy Harms; Thomas Hankemeier
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Multidisciplinary Digital Publishing Institute

Data-Independent Acquisition for the Quantification and Identification of Metabolites in Plasma

Metabolites
2020-12 | Journal article | Author
DOI: 10.3390/metabo10120514
Contributors: Tom van der Laan; Isabelle Boom; Joshua Maliepaard; Anne-Charlotte Dubbelman; Amy Harms; Thomas Hankemeier
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Multidisciplinary Digital Publishing Institute

Metabolic characterization of the natural progression of chronic hepatitis B.

2016 | Journal article
DOI: 10.1186/s13073-016-0318-8
PMID: 27286979
PMC: PMC4902991
Contributors: Schoeman JC; Hou J; Harms AC; Vreeken RJ; Berger R; Hankemeier T; Boonstra A
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Serum-Based Oxylipins Are Associated with Outcomes in Primary Prevention Implantable Cardioverter Defibrillator Patients.

2016 | Journal article
DOI: 10.1371/journal.pone.0157035
PMID: 27281224
PMC: PMC4900660
Contributors: Zhang Y; Guallar E; Blasco-Colmenares E; Harms AC; Vreeken RJ; Hankemeier T; Tomaselli GF; Cheng A
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Quantitative profiling of oxylipins in plasma and atherosclerotic plaques of hypercholesterolemic rabbits.

2016-01 | Journal article
DOI: 10.1007/s00216-015-9105-4
PMID: 26511226
Contributors: Bojic LA; McLaren DG; Harms AC; Hankemeier T; Dane A; Wang SP; Rosa R; Previs SF; Johns DG; Castro-Perez JM
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Collagen Induced Arthritis in DBA/1J Mice Associates with Oxylipin Changes in Plasma.

2015 | Journal article
DOI: 10.1155/2015/543541
PMID: 26604432
PMC: PMC4641941
Contributors: He M; van Wijk E; Berger R; Wang M; Strassburg K; Schoeman JC; Vreeken RJ; van Wietmarschen H; Harms AC; Kobayashi M et al.
Source: Self-asserted source
Amy Harms via Europe PubMed Central

First-Trimester Serum Acylcarnitine Levels to Predict Preeclampsia: A Metabolomics Approach.

2015 | Journal article
DOI: 10.1155/2015/857108
PMID: 26146448
PMC: PMC4471382
Contributors: Koster MP; Vreeken RJ; Harms AC; Dane AD; Kuc S; Schielen PC; Hankemeier T; Berger R; Visser GH; Pennings JL
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Oxylipid Profile of Low-Dose Aspirin Exposure: A Pharmacometabolomics Study.

2015-10 | Journal article
DOI: 10.1161/JAHA.115.002203
PMID: 26504148
PMC: PMC4845113
Contributors: Ellero-Simatos S; Beitelshees AL; Lewis JP; Yerges-Armstrong LM; Georgiades A; Dane A; Harms AC; Strassburg K; Guled F; Hendriks MM et al.
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Serum amine-based metabolites and their association with outcomes in primary prevention implantable cardioverter-defibrillator patients.

2015-10 | Journal article
PMID: 26498162
Contributors: Zhang Y; Blasco-Colmenares E; Harms AC; London B; Halder I; Singh M; Dudley SC; Gutmann R; Guallar E; Hankemeier T et al.
Source: Self-asserted source
Amy Harms via Europe PubMed Central

p53 attenuates AKT signaling by modulating membrane phospholipid composition.

2015-08 | Journal article
PMID: 26061814
PMC: PMC4673262
Contributors: Rueda-Rincon N; Bloch K; Derua R; Vyas R; Harms A; Hankemeier T; Khan NA; Dehairs J; Bagadi M; Binda MM et al.
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Metabolomics profiling for identification of novel potential markers in early prediction of preeclampsia.

2014 | Journal article
DOI: 10.1371/journal.pone.0098540
PMID: 24873829
PMC: PMC4038585
Contributors: Kuc S; Koster MP; Pennings JL; Hankemeier T; Berger R; Harms AC; Dane AD; Schielen PC; Visser GH; Vreeken RJ
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Pharmacometabolomics reveals that serotonin is implicated in aspirin response variability.

2014 | Journal article
DOI: 10.1038/psp.2014.22
PMID: 25029353
PMC: PMC4120016
Contributors: Ellero-Simatos S; Lewis JP; Georgiades A; Yerges-Armstrong LM; Beitelshees AL; Horenstein RB; Dane A; Harms AC; Ramaker R; Vreeken RJ et al.
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Roux-en-Y gastric bypass surgery, but not calorie restriction, reduces plasma branched-chain amino acids in obese women independent of weight loss or the presence of type 2 diabetes.

2014-12 | Journal article
DOI: 10.2337/dc14-0195
PMID: 25315204
Contributors: Lips MA; Van Klinken JB; van Harmelen V; Dharuri HK; 't Hoen PA; Laros JF; van Ommen GJ; Janssen IM; Van Ramshorst B; Van Wagensveld BA et al.
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Integrating metabolomics profiling measurements across multiple biobanks.

2014-05 | Journal article
DOI: 10.1021/ac404191a
PMID: 24650176
Contributors: Dane AD; Hendriks MM; Reijmers TH; Harms AC; Troost J; Vreeken RJ; Boomsma DI; van Duijn CM; Slagboom EP; Hankemeier T
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Metabolomic profiling reveals suppression of oxylipin biosynthesis during the early stages of legume-rhizobia symbiosis.

2012-09 | Journal article
DOI: 10.1016/j.febslet.2012.06.046
PMID: 22796495
Contributors: Zhang N; Venkateshwaran M; Boersma M; Harms A; Howes-Podoll M; den Os D; Ané JM; Sussman MR
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Discovery and validation of colonic tumor-associated proteins via metabolic labeling and stable isotopic dilution.

2009-10 | Journal article
DOI: 10.1073/pnas.0909282106
PMID: 19805096
PMC: PMC2761368
Contributors: Huttlin EL; Chen X; Barrett-Wilt GA; Hegeman AD; Halberg RB; Harms AC; Newton MA; Dove WF; Sussman MR
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Proteomic analysis of Schistosoma mansoni proteins released during in vitro miracidium-to-sporocyst transformation.

2009-03 | Journal article
DOI: 10.1016/j.molbiopara.2008.11.005
PMID: 19095013
PMC: PMC2665799
Contributors: Wu XJ; Sabat G; Brown JF; Zhang M; Taft A; Peterson N; Harms A; Yoshino TP
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Stable isotope assisted assignment of elemental compositions for metabolomics.

2007-09 | Journal article
DOI: 10.1021/ac070346t
PMID: 17708672
Contributors: Hegeman AD; Schulte CF; Cui Q; Lewis IA; Huttlin EL; Eghbalnia H; Harms AC; Ulrich EL; Markley JL; Sussman MR
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Comparison of full versus partial metabolic labeling for quantitative proteomics analysis in Arabidopsis thaliana.

2007-05 | Journal article
DOI: 10.1074/mcp.M600347-MCP200
PMID: 17293592
Contributors: Huttlin EL; Hegeman AD; Harms AC; Sussman MR
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Implications of 15N-metabolic labeling for automated peptide identification in Arabidopsis thaliana.

2007-04 | Journal article
DOI: 10.1002/pmic.200600832
PMID: 17443642
Contributors: Nelson CJ; Huttlin EL; Hegeman AD; Harms AC; Sussman MR
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Prediction of error associated with false-positive rate determination for peptide identification in large-scale proteomics experiments using a combined reverse and forward peptide sequence database strategy.

2007-01 | Journal article
DOI: 10.1021/pr0603194
PMID: 17203984
PMC: PMC2572755
Contributors: Huttlin EL; Hegeman AD; Harms AC; Sussman MR
Source: Self-asserted source
Amy Harms via Europe PubMed Central

A quantitative analysis of Arabidopsis plasma membrane using trypsin-catalyzed (18)O labeling.

2006-08 | Journal article
DOI: 10.1074/mcp.M500414-MCP200
PMID: 16635983
Contributors: Nelson CJ; Hegeman AD; Harms AC; Sussman MR
Source: Self-asserted source
Amy Harms via Europe PubMed Central

High-throughput purification and quality assurance of Arabidopsis thaliana proteins for eukaryotic structural genomics.

2005 | Journal article
DOI: 10.1007/s10969-005-1908-7
PMID: 16211511
Contributors: Jeon WB; Aceti DJ; Bingman CA; Vojtik FC; Olson AC; Ellefson JM; McCombs JE; Sreenath HK; Blommel PG; Seder KD et al.
Source: Self-asserted source
Amy Harms via Europe PubMed Central

An isotope labeling strategy for quantifying the degree of phosphorylation at multiple sites in proteins.

2004-05 | Journal article
DOI: 10.1016/j.jasms.2003.12.019
PMID: 15121193
Contributors: Hegeman AD; Harms AC; Sussman MR; Bunner AE; Harper JF
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Disulfide connectivity of recombinant C-terminal region of human thrombospondin 2.

2001-12 | Journal article
DOI: 10.1074/jbc.M104218200
PMID: 11590138
Contributors: Misenheimer TM; Hahr AJ; Harms AC; Annis DS; Mosher DF
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Advances in the mass spectrometry of hemoglobin adducts: global analysis of the covalent binding of butadiene monoxide.

2001-06 | Journal article
DOI: 10.1016/S0009-2797(01)00206-X
PMID: 11397420
Contributors: Moll TS; Harms AC; Elfarra AA
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Mass spectrometric resolution of reversible protein phosphorylation in photosynthetic membranes of Arabidopsis thaliana.

2001-03 | Journal article
DOI: 10.1074/jbc.M009394200
PMID: 11113141
Contributors: Vener AV; Harms A; Sussman MR; Vierstra RD
Source: Self-asserted source
Amy Harms via Europe PubMed Central

A comprehensive structural analysis of hemoglobin adducts formed after in vitro exposure of erythrocytes to butadiene monoxide.

2000-11 | Journal article
DOI: 10.1021/tx000151f
PMID: 11087432
Contributors: Moll TS; Harms AC; Elfarra AA
Source: Self-asserted source
Amy Harms via Europe PubMed Central

New fluorogenic substrates for N-arginine dibasic convertase.

1999-04 | Journal article
DOI: 10.1006/abio.1999.4033
PMID: 10094786
Contributors: Csuhai E; Juliano MA; Pyrek JS; Harms AC; Juliano L; Hersh LB
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Probing RegA/RNA interactions using electrospray ionization-fourier transform ion cyclotron resonance-mass spectrometry.

1998-08 | Journal article
DOI: 10.1006/abio.1998.2753
PMID: 9735149
Contributors: Liu C; Tolić LP; Hofstadler SA; Harms AC; Smith RD; Kang C; Sinha N
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Electrospray ionization-mass spectrometry characterization of heterotetrameric sarcosine oxidase.

1998-05 | Journal article
DOI: 10.1016/S1044-0305(98)00011-7
PMID: 9879365
Contributors: Pasa Tolić L; Harms AC; Anderson GA; Smith RD; Willie A; Jorns MS
Source: Self-asserted source
Amy Harms via Europe PubMed Central

On-line microdialysis sample cleanup for electrospray ionization mass spectrometry of nucleic acid samples.

1996-09 | Journal article
DOI: 10.1021/ac960286j
PMID: 8797389
Contributors: Liu C; Wu Q; Harms AC; Smith RD
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Direct measurement of oligonucleotide binding stoichiometry of gene V protein by mass spectrometry.

1996-07 | Journal article
DOI: 10.1073/pnas.93.14.7022
PMID: 8692937
PMC: PMC38928
Contributors: Cheng X; Harms AC; Goudreau PN; Terwilliger TC; Smith RD
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Mass spectrometric characterization of sequence-specific complexes of DNA and transcription factor PU.1 DNA binding domain.

1996-07 | Journal article
DOI: 10.1006/abio.1996.0287
PMID: 8660622
Contributors: Cheng X; Morin PE; Harms AC; Bruce JE; Ben-David Y; Smith RD
Source: Self-asserted source
Amy Harms via Europe PubMed Central

Peer review (2 reviews for 2 publications/grants)

Review activity for BMC molecular and cell biology. (1)
Review activity for Food analytical methods. (1)
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