Personal information

Emails & domains

Verified email addresses

Verified email domains

Other IDs

Scopus Author ID: 55447278800
Loop profile: 657001
SciProfiles: 2203076

Activities

Collapse all

Works (31)

Long-Read Draft Genome Sequences of Two <i>Fusarium oxysporum </i>f. sp. <i>cubense</i> Isolates from Banana (<i>Musa</i>. spp)

2025-03-25 | Preprint
DOI: 10.20944/preprints202503.1789.v1
Contributors: Jiaman Sun; Jinzhong Zhang; Donald M. Gardiner; Peter van Dam; Fu Gang; Brett J. Ferguson; Elizabeth A. B. Aitken; Andrew Chen
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Codon Usage Bias Analysis of theWRKYGene Family inMusa acuminata

2025-01-10 | Preprint
DOI: 10.1101/2025.01.08.631839
Contributors: Jiaman Sun; Ji Zhang; Jinzhong Zhang; Brett J. Ferguson; Andrew Chen
Source: check_circle
Crossref

Toward Marker-Assisted Selection in Breeding for Fusarium Wilt Tropical Race-4 Type Resistant Bananas

Journal of Fungi
2024-12-04 | Journal article
DOI: 10.3390/jof10120839
Contributors: Claudia Fortes Ferreira; Andrew Chen; Elizabeth A. B. Aitken; Rony Swennen; Brigitte Uwimana; Anelita de Jesus Rocha; Julianna Matos da Silva Soares; Andresa Priscila de Souza Ramos; Edson Perito Amorim
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Histological Dissection of Fusarium-Banana Interaction Using a GFP-Tagged Subtropical Race 4 Strain of Fusarium oxysporum f. sp. cubense on Banana Cultivars with Differing Levels of Resistance

Microorganisms
2024-12-01 | Journal article
DOI: 10.3390/microorganisms12122472
Contributors: Andrew Chen; Ting-Yan Chou; Yi Chen; Sumayyah M. A. Fallatah; Jay Anderson; Jiaman Sun; Harry Cosgrove; Siyuan Gao; Brett J. Ferguson; Amelie Soper et al.
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Deciphering Fusarium-Banana Interactions in Resistant and Susceptible Banana Cultivars Using a GFP-Tagged Subtropical Race 4 Strain of <em>Fusarium oxysporum</em> f. sp. cubense

2024-10-29 | Preprint
DOI: 10.20944/preprints202410.2171.v1
Contributors: Andrew Chen; Ting Yan Chou; Yi Chen; Sumayyah M. A. Fallatah; Jay Anderson; Jiaman Sun; Harry Cosgrove; Siyuan Gao; Brett Ferguson; Amelie Soper et al.
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Assessing the Pathogenicity of Berkeleyomyces rouxiae and Fusarium oxysporum f. sp. vasinfectum on Cotton (Gossypium hirsutum) Using a Rapid and Robust Seedling Screening Method

Journal of Fungi
2024-10-15 | Journal article
DOI: 10.3390/jof10100715
Contributors: Andrew Chen; Duy P. Le; Linda J. Smith; Dinesh Kafle; Elizabeth A. B. Aitken; Donald M. Gardiner
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Assessing the Pathogenicity of <i>Berkeleyomyces rouxiae</i> and <i>Fusarium oxysporum</i> f. sp. <i>vasinfectum</i> on Cotton (<i>Gossypium hirsutum</i>) Using a Rapid and Robust Seedling Screening Method

2024-09-14 | Preprint
DOI: 10.20944/preprints202409.1114.v1
Contributors: Andrew Chen; Duy P. Le; Linda J. Smith; Dinesh Kafle; Elizabeth A. B. Aitken; Donald M. Gardiner
Source: check_circle
Crossref
grade
Preferred source (of 3)‎

Long read sequencing and assembly of wild diploid relatives and cultivars in support of banana breeding programs

2024-09-03 | Preprint
DOI: 10.1101/2024.09.03.610537
Contributors: Andrew Chen; Xuefeng Zhou; Keith Decker; Ericka Havecker; Zijin Du; Allan F. Brown; Elizabeth A. B. Aitken; Shah Trushar; Brigitte Uwimana; Chelly Hresko et al.
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Fluorescently Tagged Verticillium dahliae to Understand the Infection Process on Cotton (Gossypium hirsutum) and Weed Plant Species

Pathogens
2024-05-23 | Journal article
DOI: 10.3390/pathogens13060442
Contributors: Andrew Chen; Sabrina Morrison; Aphrika Gregson; Duy P. Le; Andrew S. Urquhart; Linda J. Smith; Elizabeth A. B. Aitken; Donald M. Gardiner
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Fluorescently Tagged <em>Verticillium dahliae</em> to Understand the Infection Process on Cotton (<em>Gossypium hirsutum</em>) and Its Survival on Other Plants including Weed Species

2024-03-01 | Preprint
DOI: 10.20944/preprints202403.0031.v1
Contributors: Andrew Chen; Sabrina Morrison; Aphrika Gregson; Duy P. Le; Andrew S. Urquhart; Linda J. Smith; Elizabeth A.B. Aitken; Donald M. Gardiner
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Impact of inoculum density of Fusarium oxysporum f. sp. zingiberi on symptomatic appearances and yield of ginger (Zingiber officinale Roscoe)

Access Microbiology
2023-09-01 | Journal article
DOI: 10.1099/acmi.0.000605.v3
Contributors: Andrea Matthews; Sharan P. T. Muthukumar; Sharon Hamill; Elizabeth A. B. Aitken; Andrew Chen
Source: check_circle
Crossref

<xhtml:span xmlns:xhtml="http://www.w3.org/1999/xhtml" xml:lang="en">Impact of inoculum density of&#160;<em>Fusarium oxysporum</em>&#160;f. sp.&#160;<em>zingiberi</em>&#160;on symptomatic appearances and yield of ginger (<em>Zingiber officinale</em> Roscoe) </xhtml:span>

2023-08-15 | Preprint
DOI: 10.1099/acmi.0.000605.v2
Contributors: Andrea Matthews; Sharan Pradeep Thiruvazhuthi Muthukumar; Sharon Hamill; Elizabeth A. B. Aitken; Andrew Chen
Source: check_circle
Crossref

Genetic Mapping, Candidate Gene Identification and Marker Validation for Host Plant Resistance to the Race 4 of Fusarium oxysporum f. sp. cubense Using Musa acuminata ssp. malaccensis

Pathogens
2023-06-09 | Journal article
DOI: 10.3390/pathogens12060820
Contributors: Andrew Chen; Jiaman Sun; Altus Viljoen; Diane Mostert; Yucong Xie; Leroy Mangila; Sheryl Bothma; Rebecca Lyons; Eva Hřibová; Pavla Christelová et al.
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Genetic Mapping, Candidate Gene Identification and Marker Validation for Host Plant Resistance to the Race 4 of Fusarium oxysporum f. sp. cubense using Musa acuminata ssp. malaccensis

2023-05-05 | Preprint
DOI: 10.20944/preprints202305.0339.v1
Contributors: Andrew Chen; Jiaman Sun; Altus Viljoen; Diane Mostert; Yucong Xie; Leroy Mangila; Sheryl Bothma; Rebecca Lyons; Eva Hřibová; Pavla Christelová et al.
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Determination of the lowest infection threshold for ginger (Zingiber officinale Roscoe) by Fusarium oxysporum f. sp. zingiberi and its impact on yield

2023-04-05 | Preprint
DOI: 10.1099/acmi.0.000605.v1
Contributors: Andrea Matthews; Sharan Pradeep Thiruvazhuthi Muthukumar; Sharon Hamill; Elizabeth A. B. Aitken; Andrew Chen
Source: check_circle
Crossref

Identification of a Major QTL-Controlling Resistance to the Subtropical Race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis

Pathogens
2023-02-09 | Journal article
DOI: 10.3390/pathogens12020289
Contributors: Andrew Chen; Jiaman Sun; Guillaume Martin; Lesley-Ann Gray; Eva Hřibová; Pavla Christelová; Nabila Yahiaoui; Steve Rounsley; Rebecca Lyons; Jacqueline Batley et al.
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Fusarium Yellows of Ginger (Zingiber officinale Roscoe) Caused by Fusarium oxysporum f. sp. zingiberi Is Associated with Cultivar-Specific Expression of Defense-Responsive Genes

Pathogens
2023-01-14 | Journal article
DOI: 10.3390/pathogens12010141
Contributors: Duraisamy Prasath; Andrea Matthews; Wayne T. O’Neill; Elizabeth A. B. Aitken; Andrew Chen
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Epistatic interactions between PHOTOPERIOD1, CONSTANS1 and CONSTANS2 modulate the photoperiodic response in wheat

PLoS Genetics
2020 | Journal article
DOI: 10.1371/journal.pgen.1008812
EID:

2-s2.0-85089128790

Part of ISSN: 15537404 15537390
Contributors: Shaw, L.M.; Li, C.; Woods, D.P.; Alvarez, M.A.; Lin, H.; Lau, M.Y.; Chen, A.; Dubcovsky, J.
Source: Self-asserted source
Andrew Chen via Scopus - Elsevier
grade
Preferred source (of 2)‎

Unique Secreted in Xylem Genes in Banana-Infecting Endophytic Fusarium Oxysporum

Proceedings
2020-04-07 | Journal article
DOI: 10.3390/proceedings2019036180
Part of ISSN: 2504-3900
Source: Self-asserted source
Andrew Chen

Assessing Variations in Host Resistance to Fusarium oxysporum f sp. Cubense Race 4 in Musa Species, with a Focus on the Subtropical Race 4

Frontiers in Microbiology
2019 | Journal article
DOI: 10.3389/fmicb.2019.01062
EID:

2-s2.0-85068828760

Part of ISSN: 1664302X
Contributors: Chen, A.; Sun, J.; Matthews, A.; Armas-Egas, L.; Chen, N.; Hamill, S.; Mintoff, S.; Tran-Nguyen, L.T.T.; Batley, J.; Aitken, E.A.B.
Source: Self-asserted source
Andrew Chen via Scopus - Elsevier

Wheat VRN1, FUL2 and FUL3 play critical and redundant roles in spikelet development and spike determinacy

Development (Cambridge)
2019 | Journal article
DOI: 10.1242/dev.175398
EID:

2-s2.0-85070853240

Part of ISSN: 14779129 09501991
Contributors: Li, C.; Lin, H.; Chen, A.; Lau, M.; Jernstedt, J.; Dubcovsky, J.
Source: Self-asserted source
Andrew Chen via Scopus - Elsevier
grade
Preferred source (of 2)‎

Correction to: Development and characterization of a spring hexaploid wheat line with no functional VRN2 genes (Theoretical and Applied Genetics, (2016), 129, 7, (1417-1428), 10.1007/s00122-016-2713-3)

Theoretical and Applied Genetics
2018 | Journal article
DOI: 10.1007/s00122-018-3141-3
EID:

2-s2.0-85049809496

Part of ISSN: 00405752
Contributors: Kippes, N.; Chen, A.; Zhang, X.; Lukaszewski, A.J.; Dubcovsky, J.
Source: Self-asserted source
Andrew Chen via Scopus - Elsevier

Development and characterization of a spring hexaploid wheat line with no functional VRN2 genes

Theoretical and Applied Genetics
2016 | Journal article
DOI: 10.1007/s00122-016-2713-3
EID:

2-s2.0-84964509930

Part of ISSN: 00405752
Contributors: Kippes, N.; Chen, A.; Zhang, X.; Lukaszewski, A.J.; Dubcovsky, J.
Source: Self-asserted source
Andrew Chen via Scopus - Elsevier

RNA-seq studies using wheat PHYTOCHROME B and PHYTOCHROME C mutants reveal shared and specific functions in the regulation of flowering and shade-avoidance pathways

BMC Plant Biology
2016 | Journal article
DOI: 10.1186/s12870-016-0831-3
EID:

2-s2.0-84975230958

Part of ISSN: 14712229
Contributors: Pearce, S.; Kippes, N.; Chen, A.; Debernardi, J.M.; Dubcovsky, J.
Source: Self-asserted source
Andrew Chen via Scopus - Elsevier

Fine mapping and epistatic interactions of the vernalization gene VRN-D4 in hexaploid wheat

Molecular Genetics and Genomics
2014 | Journal article
DOI: 10.1007/s00438-013-0788-y
EID:

2-s2.0-84895874996

Part of ISSN: 16174623 16174615
Contributors: Kippes, N.; Zhu, J.; Chen, A.; Vanzetti, L.; Lukaszewski, A.; Nishida, H.; Kato, K.; Dvorak, J.; Dubcovsky, J.
Source: Self-asserted source
Andrew Chen via Scopus - Elsevier

PHYTOCHROME C plays a major role in the acceleration of wheat flowering under long-day photoperiod

Proceedings of the National Academy of Sciences of the United States of America
2014 | Journal article
DOI: 10.1073/pnas.1409795111
EID:

2-s2.0-84904297375

Part of ISSN: 10916490 00278424
Contributors: Chen, A.; Li, C.; Hu, W.; Lau, M.Y.; Lin, H.; Rockwell, N.C.; Martin, S.S.; Jernstedt, J.A.; Lagarias, J.C.; Dubcovsky, J.
Source: Self-asserted source
Andrew Chen via Scopus - Elsevier

Wheat TILLING Mutants Show That the Vernalization Gene VRN1 Down-Regulates the Flowering Repressor VRN2 in Leaves but Is Not Essential for Flowering

PLoS Genetics
2012 | Journal article
DOI: 10.1371/journal.pgen.1003134
EID:

2-s2.0-84872046553

Part of ISSN: 15537390 15537404
Contributors: Chen, A.; Dubcovsky, J.
Source: Self-asserted source
Andrew Chen via Scopus - Elsevier

Flt-2L, a locus in barley controlling flowering time, spike density, and plant height

Functional and Integrative Genomics
2009 | Journal article
DOI: 10.1007/s10142-009-0114-2
EID:

2-s2.0-63649137433

Part of ISSN: 1438793X 14387948
Contributors: Chen, A.; Baumann, U.; Fincher, G.B.; Collins, N.C.
Source: Self-asserted source
Andrew Chen via Scopus - Elsevier

Genes and traits associated with chromosome 2H and 5H regions controlling sensitivity of reproductive tissues to frost in barley

Theoretical and Applied Genetics
2009 | Journal article
DOI: 10.1007/s00122-009-0995-4
EID:

2-s2.0-67349144441

Part of ISSN: 00405752
Contributors: Chen, A.; Reinheimer, J.; Brûlé-Babel, A.; Baumann, U.; Pallotta, M.; Fincher, G.B.; Collins, N.C.
Source: Self-asserted source
Andrew Chen via Scopus - Elsevier

Structure-function analysis of the barley genome: The gene-rich region of chromosome 2HL

Functional and Integrative Genomics
2009 | Journal article
DOI: 10.1007/s10142-008-0099-2
EID:

2-s2.0-61349200833

Part of ISSN: 1438793X 14387948
Contributors: Chen, A.; Brûlé-Babel, A.; Baumann, U.; Collins, N.C.
Source: Self-asserted source
Andrew Chen via Scopus - Elsevier

Varietal and chromosome 2H locus-specific frost tolerance in reproductive tissues of barley (Hordeum vulgare L.) detected using a frost simulation chamber

Theoretical and Applied Genetics
2009 | Journal article
DOI: 10.1007/s00122-009-1079-1
EID:

2-s2.0-68349127391

Part of ISSN: 00405752
Contributors: Chen, A.; Gusta, L.V.; Brûlé-Babel, A.; Leach, R.; Baumann, U.; Fincher, G.B.; Collins, N.C.
Source: Self-asserted source
Andrew Chen via Scopus - Elsevier

Peer review (2 reviews for 2 publications/grants)

Review activity for Antonie van Leeuwenhoek. (1)
Review activity for Protoplasma. (1)
How many people are using ORCID?