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Homepage
CoNekT
PLAZA
i-ADHoRe 3.0
Trapid

Keywords

bioinformatics, evolutionary biology, large-scale biology, comparative genomics, sequence analysis, expression analysis, transcriptomics, co-expression, metagenomics

Countries

Belgium

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Employment (2)

VIB Center for Microbiology: Leuven, BE

2018-07-01 to present | Sr. PostDoc
Employment
Source: Self-asserted source
Sebastian Proost

KU Leuven-University of Leuven: Leuven, BE

2018-07-01 to present | Sr. PostDoc (Department of Microbiology and Immunology)
Employment
Source: Self-asserted source
Sebastian Proost

Works (44)

Associations of HIV and iron status with gut microbiota composition, gut inflammation and gut integrity in South African school‐age children: a two‐way factorial case–control study

Journal of Human Nutrition and Dietetics
2023-06 | Journal article
DOI: 10.1111/jhn.13171
Contributors: Charlene Goosen; Sebastian Proost; Jeannine Baumgartner; Kashish Mallick; Raul Y. Tito; Shaun L. Barnabas; Mark F. Cotton; Michael B. Zimmermann; Jeroen Raes; Renée Blaauw
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Mood disorders in higher education in Flanders during the 2nd and 3 COVID-19 wave: Prevalence and help-seeking: Findings from the Flemish College Surveys (FLeCS)

Journal of Psychiatric Research
2023-03 | Journal article
DOI: 10.1016/j.jpsychires.2023.01.017
Contributors: Erik Bootsma; Leontien Jansen; Glenn Kiekens; Wouter Voorpoels; Philippe Mortier; Sebastian Proost; Ilse vande Poel; Karen Jacobs; Koen Demyttenaere; Jordi Alonso et al.
Source: check_circle
Crossref
grade
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Long-term life history predicts current gut microbiome in a population-based cohort study

Nature Aging
2022-10 | Journal article
DOI: 10.1038/s43587-022-00286-w
SOURCE-WORK-ID:

4072054

PMC: PMC10154234
PMID: 37118287
Part of ISSN: 2662-8465
WOSUID:

WOS:000935219500008
Contributors: Jiyeon Si; Jorge F Vazquez-Castellanos; Ann C Gregory; Lindsey Decommer; Leen Rymenans; Sebastian Proost; Javier Centelles Lodeiro; Martin Weger; Marlene Notdurfter; Christoph Leitner et al.
Source: check_circle
KU Leuven

High-energy-level metabolism and transport occur at the transition from closed to open flowers

Plant Physiology
2022-08-29 | Journal article
DOI: 10.1093/plphys/kiac253
Contributors: Monica Borghi; Leonardo Perez de Souza; Takayuki Tohge; Jianing Mi; Giovanni Melandri; Sebastian Proost; Marina C M Martins; Salim Al-Babili; Harro J Bouwmeester; Alisdair R Fernie
Source: check_circle
Crossref
grade
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The effect of oral iron supplementation on the gut microbiota, gut inflammation, and iron status in iron-depleted South African school-age children with virally suppressed HIV and without HIV

European Journal of Nutrition
2022-06 | Journal article
DOI: 10.1007/s00394-021-02793-9
Contributors: Charlene Goosen; Sebastian Proost; Raul Y. Tito; Jeannine Baumgartner; Shaun L. Barnabas; Mark F. Cotton; Michael B. Zimmermann; Jeroen Raes; Renée Blaauw
Source: check_circle
Crossref
grade
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The Effect of ß-Glucan Prebiotic on Kidney Function, Uremic Toxins and Gut Microbiome in Stage 3 to 5 Chronic Kidney Disease (CKD) Predialysis Participants: A Randomized Controlled Trial

Nutrients
2022-02-14 | Journal article
DOI: 10.3390/nu14040805
Contributors: Zarina Ebrahim; Sebastian Proost; Raul Yhossef Tito; Jeroen Raes; Griet Glorieux; Mohammed Rafique Moosa; Renée Blaauw
Source: check_circle
Crossref
grade
Preferred source (of 3)‎

Topology of the redox network during induction of photosynthesis as revealed by time-resolved proteomics in tobacco

Science Advances
2021-12-17 | Journal article
DOI: 10.1126/sciadv.abi8307
Contributors: David Zimmer; Corné Swart; Alexander Graf; Stéphanie Arrivault; Michael Tillich; Sebastian Proost; Zoran Nikoloski; Mark Stitt; Ralph Bock; Timo Mühlhaus et al.
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Comparative transcriptomic analysis reveals conserved programmes underpinning organogenesis and reproduction in land plants

Nature Plants
2021-07-12 | Journal article
DOI: 10.1038/s41477-021-00958-2
Contributors: Irene Julca; Camilla Ferrari; María Flores-Tornero; Sebastian Proost; Ann-Cathrin Lindner; Dieter Hackenberg; Lenka Steinbachová; Christos Michaelidis; Sónia Gomes Pereira; Chandra Shekhar Misra et al.
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Kingdom-wide analysis of the evolution of the plant type III polyketide synthase superfamily

Plant Physiology
2021-03 | Journal article
DOI: 10.1093/plphys/kiaa086
SOURCE-WORK-ID:

3431794

PMC: PMC8133574
PMID: 33793871
Part of ISSN: 0032-0889
WOSUID:

WOS:000640616500026
Contributors: Thomas Naake; Hiroshi A Maeda; Sebastian Proost; Takayuki Tohge; Alisdair R Fernie
Source: check_circle
KU Leuven

Statin therapy is associated with lower prevalence of gut microbiota dysbiosis

Nature
2020-05-28 | Journal article
DOI: 10.1038/s41586-020-2269-x
SOURCE-WORK-ID:

3039908

PMID: 32433607
Part of ISSN: 0028-0836
WOSUID:

WOS:000618867700001
Contributors: Sara Vieira-Silva; Gwen Falony; Eugeni Belda; Trine Nielsen; Judith Aron-Wisnewsky; Rima Chakaroun; Sofia K Forslund; Karen Assmann; Mireia Valles-Colomer; Thi Thuy Duyen Nguyen et al.
Source: check_circle
KU Leuven

Kingdom-wide analysis of the evolution of the plant type III polyketide synthase superfamily

2020-04-29 | Preprint
DOI: 10.1101/2020.04.28.059733
Contributors: Thomas Naake; Hiroshi A. Maeda; Sebastian Proost; Takayuki Tohge; Alisdair R. Fernie
Source: check_circle
Crossref

A novel seed plants gene regulates oxidative stress tolerance in Arabidopsis thaliana

Cellular And Molecular Life Sciences
2020-02-01 | Journal article
DOI: 10.1007/s00018-019-03202-5
SOURCE-WORK-ID:

2818133

PMC: PMC7040063
PMID: 31250033
Part of ISSN: 1420-682X
WOSUID:

WOS:000519371800010
Contributors: Neerakkal Sujeeth; Nikolay Mehterov; Saurabh Gupta; Muhammad K Qureshi; Axel Fischer; Sebastian Proost; M Amin Omidbakhshfard; Toshihiro Obata; Maria Benina; Nikola Staykov et al.
Source: check_circle
KU Leuven

Transcriptomics of manually isolated Amborella trichopoda egg apparatus cells (vol 32, pg 15, 2019)

Plant Reproduction
2019-06 | Other
DOI: 10.1007/s00497-019-00367-8
SOURCE-WORK-ID:

2378690

PMID: 30805714
PMC: PMC6500505
Part of ISSN: 2194-7953
WOSUID:

WOS:000466918500009
Contributors: Maria Flores-Tornero; Sebastian Proost; Marek Mutwil; Charles P Scutt; Thomas Dresselhaus; Stefanie Sprunck
Source: check_circle
KU Leuven
grade
Preferred source (of 3)‎

Appropriate Thiamin Pyrophosphate Levels Are Required for Acclimation to Changes in Photoperiod

Plant Physiology
2019-05 | Journal article
DOI: 10.1104/pp.18.01346
SOURCE-WORK-ID:

2379288

PMC: PMC6501078
PMID: 30837347
Part of ISSN: 0032-0889
WOSUID:

WOS:000466860800021
Contributors: Laise Rosado-Souza; Sebastian Proost; Michael Moulin; Susan Bergmann; Samuel E Bocobza; Asaph Aharoni; Teresa B Fitzpatrick; Marek Mutwil; Alisdair R Fernie; Toshihiro Obata
Source: check_circle
KU Leuven

Multi-tissue integration of transcriptomic and specialized metabolite profiling provides tools for assessing the common bean (Phaseolus vulgaris) metabolome

Plant Journal
2019-03-01 | Journal article
DOI: 10.1111/tpj.14178
SOURCE-WORK-ID:

2341504

PMC: PMC6850281
PMID: 30480348
Part of ISSN: 0960-7412
WOSUID:

WOS:000463965900012
Contributors: Leonardo Perez de Souza; Federico Scossa; Sebastian Proost; Elena Bitocchi; Roberto Papa; Takayuki Tohge; Alisdair R Fernie
Source: check_circle
KU Leuven

CoNekT: an open-source framework for comparative genomic and transcriptomic network analyses
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 3)‎

Kingdom-wide comparison reveals conserved diurnal gene expression in Archaeplastida

2018 | Other
DOI: 10.1101/387316
DOI: 10.1038/s41467-019-08703-2
SOURCE-WORK-ID:

2114096

SOURCE-WORK-ID:

2370415

PMID: 30760717
PMC: PMC6374488
Part of ISSN: 2041-1723
WOSUID: WOS:000458567700003
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 3)‎

PhytoNet: Comparative co-expression network analyses across phytoplankton and land plants
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 3)‎

AtRsgA from Arabidopsis thaliana controls maturation of the small subunit of the chloroplast ribosome
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 4)‎

Beyond Genomics: Studying Evolution with Gene Coexpression Networks

Trends in plant science
2017 | Journal article
DOI: 10.1016/j.tplants.2016.12.011
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

Expression atlas and comparative coexpression network analyses reveal important genes involved in the formation of lignified cell wall in Brachypodium distachyon

The New phytologist
2017 | Journal article
DOI: 10.1111/nph.14635
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

LSTrAP: efficiently combining RNA sequencing data into co-expression networks

BMC bioinformatics
2017 | Journal article
DOI: 10.1186/s12859-017-1861-z
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 3)‎

Novel allelic variants in ACD6 cause hybrid necrosis in local collection of Arabidopsis thaliana

The New phytologist
2017 | Journal article
DOI: 10.1111/nph.14155
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

Phylogenomic analysis of gene co-expression networks reveals the evolution of functional modules

The Plant journal : for cell and molecular biology
2017 | Journal article
DOI: 10.1111/tpj.13502
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

PlaNet: Comparative Co-Expression Network Analyses for Plants

Methods in molecular biology (Clifton, N.J.)
2017 | Journal article
DOI: 10.1007/978-1-4939-6658-5_12
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

Tools of the trade: studying molecular networks in plants

Current opinion in plant biology
2016 | Journal article
DOI: 10.1016/j.pbi.2016.02.010
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

Corrigendum: The genome sequence of the orchid Phalaenopsis equestris

Nature genetics
2015 | Journal article
DOI: 10.1038/ng0315-304a
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

Growth-Regulating Factors (GRFs): A Small Transcription Factor Family with Important Functions in Plant Biology

Molecular plant
2015 | Journal article
DOI: 10.1016/j.molp.2015.01.013
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

PLAZA 3.0: an access point for plant comparative genomics

Nucleic acids research
2015 | Journal article
DOI: 10.1093/nar/gku986
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

The genome sequence of the orchid Phalaenopsis equestris

Nature genetics
2015 | Journal article
DOI: 10.1038/ng.3149
DOI: 10.1038/ng0215-186
SOURCE-WORK-ID:

1990995

SOURCE-WORK-ID:

1991132

PMID: 25420146
Part of ISSN: 1061-4036
WOSUID: WOS:000346990400013
WOSUID: WOS:000348694700015
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 3)‎

Reversal of senescence by N resupply to N-starved Arabidopsis thaliana: transcriptomic and metabolomic consequences

Journal of experimental botany
2014 | Journal article
DOI: 10.1093/jxb/eru119
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

FLOWERING LOCUS C in monocots and the tandem origin of angiosperm-specific MADS-box genes

Nature communications
2013 | Journal article
DOI: 10.1038/ncomms3280
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

TRAPID: an efficient online tool for the functional and comparative analysis of de novo RNA-Seq transcriptomes

Genome biology
2013 | Journal article
DOI: 10.1186/gb-2013-14-12-r134
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

Dissecting plant genomes with the PLAZA comparative genomics platform

Plant physiology
2012 | Journal article
DOI: 10.1104/pp.111.189514
SOURCE-WORK-ID:

1990999

PMC: PMC3271752
PMID: 22198273
Part of ISSN: 0032-0889
WOSUID: WOS:000300054300005
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 3)‎

Gamma paleohexaploidy in the stem lineage of core eudicots: significance for MADS-box gene and species diversification

Molecular biology and evolution
2012 | Journal article
DOI: 10.1093/molbev/mss183
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

i-ADHoRe 3.0--fast and sensitive detection of genomic homology in extremely large data sets

Nucleic acids research
2012 | Journal article
DOI: 10.1093/nar/gkr955
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

Integration of genomic data to study genome evolution in plants

2012 | Dissertation or Thesis
Source: Self-asserted source
Sebastian Proost

A greedy, graph-based algorithm for the alignment of multiple homologous gene lists

Bioinformatics
2011 | Journal article
DOI: 10.1093/bioinformatics/btr008
SOURCE-WORK-ID:

1991002

PMID: 21216775
Part of ISSN: 1367-4803
WOSUID: WOS:000288277300002
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

Journey through the past: 150 million years of plant genome evolution

The Plant Journal
2011 | Journal article
DOI: 10.1111/j.1365-313X.2011.04521.x
SOURCE-WORK-ID:

1991001

PMID: 21443623
Part of ISSN: 0960-7412
WOSUID: WOS:000288862500006
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

The Medicago genome provides insight into the evolution of rhizobial symbioses

Nature
2011 | Journal article
DOI: 10.1038/nature10625
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

The genome of the domesticated apple (Malus [times] domestica Borkh.)

Nature genetics
2010 | Journal article
DOI: 10.1038/ng.654
SOURCE-WORK-ID:

1991003

PMID: 20802477
Part of ISSN: 1061-4036
WOSUID: WOS:000282276600012
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

PLAZA: a comparative genomics resource to study gene and genome evolution in plants

The Plant Cell Online
2009 | Journal article
DOI: 10.1105/tpc.109.071506
SOURCE-WORK-ID:

1991004

PMC: PMC2814516
PMID: 20040540
Part of ISSN: 1040-4651
WOSUID: WOS:000274196000003
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

Predicting protein-protein interactions in Arabidopsis thaliana through integration of orthology, gene ontology and co-expression

BMC genomics
2009 | Journal article
DOI: 10.1186/1471-2164-10-288
SOURCE-WORK-ID:

1991006

PMC: PMC2719670
PMID: 19563678
Part of ISSN: 1471-2164
WOSUID: WOS:000269505600002
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎

The flowering world: a tale of duplications

Trends in plant science
2009 | Journal article
DOI: 10.1016/j.tplants.2009.09.001
SOURCE-WORK-ID:

1991005

PMID: 19818673
Part of ISSN: 1360-1385
WOSUID: WOS:000272855700006
Source: Self-asserted source
Sebastian Proost
grade
Preferred source (of 2)‎
How many people are using ORCID?