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Websites & social links

https://tu-dresden.de/mn/chemie/bc/bc1/forschung/discovery

Other IDs

Scopus Author ID: 36238867300
Loop profile: 400048
ResearcherID: B-9890-2015
Ciência ID: EC1D-9418-19A8

Countries

Australia

Activities

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Employment (5)

Technische Universität Dresden: Dresden, Sachsen, DE

2019-09-01 to present | Postdoc (Department of Chemistry and Food Chemistry)
Employment
Source: Self-asserted source
Paul Michael D'Agostino

Technische Universität München Fakultät für Chemie: Garching, Bayern, DE

2017-09-01 to 2019-08-31 | Marie Skłodowska-Curie Individual Fellow (Biosystems Chemie)
Employment
Source: Self-asserted source
Paul Michael D'Agostino

Technische Universität München: Garching, Bayern, DE

2015-12-01 to 2016-12-01 | TUM Foundation Fellow (Department of Chemistry)
Employment
Source: Self-asserted source
Paul Michael D'Agostino

University of New South Wales: Randwick, NSW, AU

2013-10-01 to 2015-11-30 | Research Associate (School of Biotechnology and Biomolecular Sciences)
Employment
Source: Self-asserted source
Paul Michael D'Agostino

University of Western Sydney: Campbelltown, NSW, AU

2008 to 2012 | Microbiology Laboratory Supervisor/Demonstrator (School of Science and Health)
Employment
Source: Self-asserted source
Paul Michael D'Agostino

Education and qualifications (1)

University of Western Sydney: Campbelltown, NSW, AU

2009 to 2014 | PhD (School of Science and Health)
Education
Source: Self-asserted source
Paul Michael D'Agostino

Professional activities (4)

Microbiology Society: London, GB

Membership
Source: Self-asserted source
Paul Michael D'Agostino

Vereinigung für Allgemeine und Angewandte Mikrobiologie: Frankfurt, DE

2019-09 to present
Membership
Source: Self-asserted source
Paul Michael D'Agostino

Marie Curie Alumni Association: Munich, DE

2017-05 to present
Membership
Source: Self-asserted source
Paul Michael D'Agostino

Royal Society of Chemistry: London, London, GB

2017-01 to present
Membership
Source: Self-asserted source
Paul Michael D'Agostino

Funding (2)

Expanding genomic knowledge of unexplored symbiotic and terrestrial cyanobacteria

2021-01 to 2024-01 | Grant
DOE Joint Genome Institute (Walnut Creek, US)
GRANT_NUMBER: 506790
Source: check_circle
CIÊNCIAVITAE

PacBio sequencing and genome mining of neglected bacteria in the hunt for novel (bio-)chemistry

2016 to 2020 | Grant
DOE Joint Genome Institute (Walnut Creek, US)
GRANT_NUMBER:

502890

Source: check_circle
CIÊNCIAVITAE

Works (41)

The Maculalactone Biosynthetic Gene Cluster, a Cryptic Furanolide Pathway Revealed inNodulariasp. NIES-3585

2025-02-28 | Preprint
DOI: 10.1101/2025.02.26.640319
Contributors: Paul M. D’Agostino; Roberta R. de Castro; Valdet Uka; Kumar Saurav; Tobias M. Milzarek; Angela Sester; Maria Paula Schneider; Tobias A. M. Gulder
Source: check_circle
Crossref

MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration

Nucleic Acids Research
2025-01-06 | Journal article
DOI: 10.1093/nar/gkae1115
Part of ISSN: 0305-1048
Part of ISSN: 1362-4962
Contributors: Mitja M Zdouc; Kai Blin; Nico L L Louwen; Jorge C. Navarro-Muñoz; Catarina Loureiro; Chantal D Bader; Constance B Bailey; Lena Barra; Thomas J Booth; Kenan A J Bozhüyük et al.
Source: Self-asserted source
Paul Michael D'Agostino

Functionalization of silk with actinomycins from <i>Streptomyces anulatu</i>s BV365 for biomedical applications

Frontiers in Bioengineering and Biotechnology
2024 | Journal article
DOI: 10.3389/FBIOE.2024.1466757
WOSUID: WOS:001331015300001
Contributors: Ilic-Tomic, Tatjana; Kramar, Ana; Kostic, Mirjana; Vojnovic, Sandra; Milovanovic, Jelena; Petkovic, Milos; D'Agostino, Paul M.; Gulder, Tobias A. M.; Nikodinovic-Runic, Jasmina
Source: check_circle
Web of Science Researcher Profile Sync
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Discovery and biosynthesis of non-canonical C16-terpenoids from Pseudomonas

Cell Chemical Biology
2024-12 | Journal article
DOI: 10.1016/j.chembiol.2024.09.002
Contributors: Xu-Hua Mo; Qing-Yin Pu; Tilo Lübken; Gui-Hong Yu; Mert Malay; Paul M. D’Agostino; Tobias A.M. Gulder
Source: check_circle
Crossref

Phylometagenomics of cycad coralloid roots reveals shared symbiotic signals

Microbial Genomics
2024-03-07 | Journal article
DOI: 10.1099/mgen.0.001207
Contributors: Edder D. Bustos-Diaz; Arely Cruz-Perez; Diego Garfias-Gallegos; Paul M. D'Agostino; Michelle M. Gehringer; Angelica Cibrian-Jaramillo; Francisco Barona-Gomez
Source: check_circle
Crossref

The underestimated fraction: diversity, challenges and novel insights into unicellular cyanobionts of lichens

ISME Communications
2024-01-08 | Journal article
DOI: 10.1093/ismeco/ycae069
Contributors: Patrick Jung; Laura Briegel-Williams; Burkhard Büdel; Matthias Schultz; Dennis J Nürnberg; Martin Grube; Paul M D’Agostino; Jan Kaštovský; Jan Mareš; Maike Lorenz et al.
Source: check_circle
Crossref

Direct pathway cloning and expression of the radiosumin biosynthetic gene cluster

Organic & Biomolecular Chemistry
2023 | Journal article
DOI: 10.1039/D3OB00385J
Contributors: Xiaodan Ouyang; Paul M. D'Agostino; Matti Wahlsten; Endrews Delbaje; Jouni Jokela; Perttu Permi; Greta Gaiani; Antti Poso; Piia Bartos; Tobias A. M. Gulder et al.
Source: check_circle
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Highlights of biosynthetic enzymes and natural products from symbiotic cyanobacteria

Natural Product Reports
2023 | Journal article
DOI: 10.1039/D3NP00011G
Contributors: Paul M. D'Agostino
Source: check_circle
Crossref
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S75 | CyanoMetDB | Comprehensive database of secondary metabolites from cyanobacteria

Zenodo
2023-05-10 | Dataset
DOI: 10.5281/ZENODO.7922070
Contributors: Elisabeth M-L Janssen; Martin R Jones; Ernani Pinto; Fabiane Dörr; Mariana A Torres; Fernanda Rios Jacinavicius; Hanna Mazur-Marzec; Karolina Szubert; Robert Konkel; Luciana Tartaglione et al.
Source: Self-asserted source
Paul Michael D'Agostino
grade
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Discovery and Heterologous Expression of Microginins from Microcystis aeruginosa LEGE 91341

ACS Synthetic Biology
2022-10-21 | Journal article
DOI: 10.1021/acssynbio.2c00389
Contributors: Nádia Eusébio; Raquel Castelo-Branco; Diana Sousa; Marco Preto; Paul D’Agostino; Tobias A. M. Gulder; Pedro N. Leão
Source: check_circle
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Streptomyces sp. BV410: Interspecies cross-talk for staurosporine production

Journal of Applied Microbiology
2022-10-01 | Journal article
DOI: 10.1111/jam.15726
Part of ISSN: 1365-2672
Part of ISSN: 1364-5072
Contributors: Milena Stevanovic; Paul Michael D'Agostino; Marija Mojicevic; Tobias A. M. Gulder; Jasmina Nikodinovic-Runic; Sandra Vojnovic
Source: Self-asserted source
Paul Michael D'Agostino

Biosynthesis of cyanobacterin, a paradigm for furanolide core structure assembly

Nature Chemical Biology
2022-06 | Journal article
DOI: 10.1038/s41589-022-01013-7
Contributors: Paul M. D’Agostino; Catharina J. Seel; Xiaoqi Ji; Tanja Gulder; Tobias A. M. Gulder
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Final Destination? Pinpointing Hyella disjuncta sp. nov. PCC 6712 (Cyanobacteria) Based on Taxonomic Aspects, Multicellularity, Nitrogen Fixation and Biosynthetic Gene Clusters

Life
2021-09-03 | Journal article
DOI: 10.3390/life11090916
Contributors: Patrick Jung; Paul M. D’Agostino; Katharina Brust; Burkhard Büdel; Michael Lakatos
Source: check_circle
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Recent developments in quantitative PCR for monitoring harmful marine microalgae

Harmful Algae
2021-08 | Journal article
DOI: 10.1016/j.hal.2021.102096
Contributors: Leanne A. Pearson; Paul M. D'Agostino; Brett A. Neilan
Source: check_circle
Crossref

Symphyonema bifilamentata sp. nov., the Right Fischerella ambigua 108b: Half a Decade of Research on Taxonomy and Bioactive Compounds in New Light

Microorganisms
2021-04-02 | Journal article
DOI: 10.3390/microorganisms9040745
Contributors: Patrick Jung; Paul M. D’Agostino; Burkhard Büdel; Michael Lakatos
Source: check_circle
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Comparative proteomics of the toxigenic diazotroph Raphidiopsis raciborskii (cyanobacteria) in response to iron

Environmental Microbiology
2021-01 | Journal article
DOI: 10.1111/1462-2920.15328
Contributors: Paul M. D'Agostino; Anna C. Y. Yeung; Anne Poljak; Trevor David Waite; Brett A. Neilan
Source: check_circle
Crossref

Identification of promoter elements in the Dolichospermum circinale AWQC131C saxitoxin gene cluster and the experimental analysis of their use for heterologous expression

BMC Microbiology
2020-12 | Journal article
DOI: 10.1186/s12866-020-1720-3
Contributors: Paul M. D’Agostino; Bakir Al-Sinawi; Rabia Mazmouz; Julia Muenchhoff; Brett A. Neilan; Michelle C. Moffitt
Source: check_circle
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A collection of bacterial isolates from the pig intestine reveals functional and taxonomic diversity

Nature Communications
2020-12-15 | Journal article
DOI: 10.1038/s41467-020-19929-w
Part of ISSN: 2041-1723
Source: Self-asserted source
Paul Michael D'Agostino

Antarctic desert soil bacteria exhibit high novel natural product potential, evaluated through long‐read genome sequencing and comparative genomics

Environmental Microbiology
2020-11-10 | Journal article
DOI: 10.1111/1462-2920.15300
Part of ISSN: 1462-2912
Part of ISSN: 1462-2920
Source: Self-asserted source
Paul Michael D'Agostino

Streptomyces sp. BV410 isolate from chamomile rhizosphere soil efficiently produces staurosporine with antifungal and antiangiogenic properties

MicrobiologyOpen
2020-03 | Journal article
DOI: 10.1002/mbo3.986
Contributors: Marija Mojicevic; Paul M. D'Agostino; Aleksandar Pavic; Sandra Vojnovic; Ramsankar Senthamaraikannan; Branka Vasiljevic; Tobias A. M. Gulder; Jasmina Nikodinovic‐Runic
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Discovery of the Streptoketides by Direct Cloning and Rapid Heterologous Expression of a Cryptic PKS II Gene Cluster from Streptomyces sp. Tü6314

The Journal of Organic Chemistry
2019-11-20 | Journal article
DOI: 10.1021/acs.joc.9b02741
Part of ISSN: 0022-3263
Part of ISSN: 1520-6904
Source: Self-asserted source
Paul Michael D'Agostino
grade
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Bypassing Biocatalytic Substrate Limitations in Oxidative Dearomatization Reactions by Transient Substrate Mimicking

Organic Letters
2019-06-21 | Journal article
DOI: 10.1021/acs.orglett.9b01398
Contributors: Tobias M. Milzarek; Manuel Einsiedler; Hülya Aldemir; Paul M. D’Agostino; Julia K. Evers; Gesa Hertrampf; Katharina Lamm; Mert Malay; Anke Matura; Jonas I. Müller et al.
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Bioinformatic, phylogenetic and chemical analysis of the UV‐absorbing compounds scytonemin and mycosporine‐like amino acids from the microbial mat communities of Shark Bay, Australia

Environmental Microbiology
2019-02 | Journal article
DOI: 10.1111/1462-2920.14517
Contributors: Paul M. D'Agostino; Jason N. Woodhouse; Heng Tai Liew; Luděk Sehnal; Russel Pickford; Hon Lun Wong; Brendan P. Burns; Brett A. Neilan
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Direct pathway cloning of the sodorifen biosynthetic gene cluster and recombinant generation of its product in E. coli

Microbial Cell Factories
2019-02 | Journal article
DOI: 10.1186/s12934-019-1080-6
Source: Self-asserted source
Paul Michael D'Agostino
grade
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Re-evaluation of paralytic shellfish toxin profiles in cyanobacteria using hydrophilic interaction liquid chromatography-tandem mass spectrometry

Toxicon
2019-02 | Journal article
DOI: 10.1016/j.toxicon.2018.11.301
Contributors: Paul M. D'Agostino; Michael J. Boundy; Tim D. Harwood; Wayne W. Carmichael; Brett A. Neilan; Susanna A. Wood
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Antifungal potential of bacterial rhizosphere isolates associated with three ethno-medicinal plants (poppy, chamomile, and nettle)

International Microbiology
2019-01-09 | Journal article
DOI: 10.1007/s10123-019-00054-8
Part of ISSN: 1139-6709
Contributors: Marija Mojicevic; Paul M. D’Agostino; Jasmina Nikodinovic-Runic; Branka Vasiljevic; Tobias A.M. Gulder; Sandra Vojnovic
Source: Self-asserted source
Paul Michael D'Agostino via Crossref Metadata Search
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Insertions within the Saxitoxin Biosynthetic Gene Cluster Result in Differential Toxin Profiles

ACS Chemical Biology
2018-11-16 | Journal article
DOI: 10.1021/acschembio.8b00608
Contributors: Alescia Cullen; Paul M. D’Agostino; Rabia Mazmouz; Russell Pickford; Susanna Wood; Brett A. Neilan
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Direct Pathway Cloning Combined with Sequence- and Ligation-Independent Cloning for Fast Biosynthetic Gene Cluster Refactoring and Heterologous Expression

ACS Synthetic Biology
2018-07-20 | Journal article
DOI: 10.1021/acssynbio.8b00151
Contributors: Paul M. D’Agostino; Tobias A. M. Gulder
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Direct Pathway Cloning (DiPaC) to unlock natural product biosynthetic potential

Metabolic Engineering
2018-05 | Journal article
DOI: 10.1016/j.ymben.2018.03.010
Contributors: Christian Greunke; Elke Regina Duell; Paul Michael D’Agostino; Anna Glöckle; Katharina Lamm; Tobias Alexander Marius Gulder
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Molecular and morphological survey of saxitoxin-producing cyanobacterium Dolichospermum circinale ( Anabaena circinalis ) isolated from geographically distinct regions of Australia

Toxicon
2017-11 | Journal article
DOI: 10.1016/j.toxicon.2017.08.006
Contributors: Joao P.A. Pereyra; Paul M. D'Agostino; Rabia Mazmouz; Jason N. Woodhouse; Russell Pickford; Ian Jameson; Brett A. Neilan
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Comparative Profiling and Discovery of Novel Glycosylated Mycosporine-Like Amino Acids in Two Strains of the Cyanobacterium Scytonema cf. crispum

Applied and Environmental Microbiology
2016-10 | Journal article
DOI: 10.1128/AEM.01633-16
Contributors: Paul M. D'Agostino; Vivek S. Javalkote; Rabia Mazmouz; Russell Pickford; Pravin R. Puranik; Brett A. Neilan; H. Nojiri
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Physiological and Proteomic Responses of Continuous Cultures of Microcystis aeruginosa PCC 7806 to Changes in Iron Bioavailability and Growth Rate

Applied and Environmental Microbiology
2016-10 | Journal article
DOI: 10.1128/AEM.01207-16
Contributors: Anna C. Y. Yeung; Paul M. D'Agostino; Anne Poljak; James McDonald; Mark W. Bligh; T. David Waite; Brett A. Neilan; R. M. Kelly
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The genetics, biosynthesis and regulation of toxic specialized metabolites of cyanobacteria

Harmful Algae
2016-04 | Journal article
DOI: 10.1016/j.hal.2015.11.002
Source: Self-asserted source
Paul Michael D'Agostino
grade
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Advances in genomics, transcriptomics and proteomics of toxin-producing cyanobacteria

Environmental Microbiology Reports
2016-01 | Journal article
DOI: 10.1111/1758-2229.12366
Contributors: Paul M. D'Agostino; Jason N. Woodhouse; A. Katharina Makower; Anna C. Y. Yeung; Sarah E. Ongley; Melinda L. Micallef; Michelle C. Moffitt; Brett A. Neilan
Source: Self-asserted source
Paul Michael D'Agostino via Crossref Metadata Search
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Proteogenomics of a saxitoxin-producing and non-toxic strain of A nabaena circinalis (cyanobacteria) in response to extracellular NaCl and phosphate depletion

Environ Microbiol
2016-01 | Journal article
DOI: 10.1111/1462-2920.13131
Contributors: Paul M. D'Agostino; Xiaomin Song; Brett A. Neilan; Michelle C. Moffitt
Source: Self-asserted source
Paul Michael D'Agostino via Crossref Metadata Search
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Exploring cyanobacterial genomes for natural product biosynthesis pathways

Marine Genomics
2015 | Journal article
DOI: 10.1016/j.margen.2014.11.009
EID:

2-s2.0-84928767800
Contributors: Micallef, M.L.; D'Agostino, P.M.; Al-Sinawi, B.; Neilan, B.A.; Moffitt, M.C.
Source: Self-asserted source
Paul Michael D'Agostino via Scopus - Elsevier
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Genome mining for natural product biosynthetic gene clusters in the Subsection V cyanobacteria.

2015 | Journal article
DOI: 10.1186/s12864-015-1855-z
PMID: 26335778
Contributors: Micallef ML; D'Agostino PM; Sharma D; Viswanathan R; Moffitt MC
Source: Self-asserted source
Paul Michael D'Agostino via Europe PubMed Central
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Comparative proteomics reveals that a saxitoxin-producing and a nontoxic strain of Anabaena circinalis are two different ecotypes

Journal of Proteome Research
2014 | Journal article
DOI: 10.1021/pr401007k
EID:

2-s2.0-84896770392
Contributors: D'Agostino, P.M.; Song, X.; Neilan, B.A.; Moffitt, M.C.
Source: Self-asserted source
Paul Michael D'Agostino via Scopus - Elsevier
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Current Knowledge of Paralytic Shellfish Toxin Biosynthesis, Molecular Detection and Evolution

Toxins and Biologically Active Compounds from Microalgae, Volume 1
2014-01 | Other
DOI: 10.1201/b16569-13
Contributors: Paul D’Agostino; Michelle Moffitt; Brett Neilan
Source: Self-asserted source
Paul Michael D'Agostino via Crossref Metadata Search
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Using genbank® for genomic authentication: A tutorial

Methods in Molecular Biology
2012 | Book
DOI: 10.1007/978-1-61779-609-8_15
EID:

2-s2.0-84859826612
Contributors: Hennell, J.R.; D'Agostino, P.M.; Lee, S.; Khoo, C.S.; Sucher, N.J.
Source: Self-asserted source
Paul Michael D'Agostino via Scopus - Elsevier
grade
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Neurotoxic alkaloids: Saxitoxin and its analogs

Marine Drugs
2010 | Journal article
DOI: 10.3390/md8072185
EID:

2-s2.0-77955299705
Contributors: Wiese, M.; D'Agostino, P.M.; Mihali, T.K.; Moffitt, M.C.; Neilan, B.A.
Source: Self-asserted source
Paul Michael D'Agostino via Scopus - Elsevier
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Peer review (137 reviews for 32 publications/grants)

Review activity for ["Journal of Genetic Engineering and Biotechnology.","مجلة المركز القومي للبحوث للتكنولوجيا الحيوية"] (3)
Review activity for ACS ES & T water. (1)
Review activity for Algal research. (2)
Review activity for Biomolecules. (2)
Review activity for Bioscience reports. (4)
Review activity for BMC genomics (19)
Review activity for BMC microbiology (2)
Review activity for Czech Journal of Food Sciences. (1)
Review activity for Environmental microbiology. (3)
Review activity for Environmental science & technology. (16)
Review activity for European journal of phycology. (2)
Review activity for Frontiers in bioengineering and biotechnology. (1)
Review activity for Frontiers in genetics. (1)
Review activity for Frontiers in marine science. (2)
Review activity for Harmful algae. (2)
Review activity for International journal of environmental research and public health (3)
Review activity for International journal of hygiene and environmental health. (2)
Review activity for International journal of molecular sciences. (5)
Review activity for Journal of applied phycology. (2)
Review activity for Journal of experimental marine biology and ecology. (2)
Review activity for Journal of marine science and engineering. (2)
Review activity for Journal of phycology. (1)
Review activity for Life. (5)
Review activity for Marine drugs. (6)
Review activity for Microbiology spectrum. (1)
Review activity for Microorganisms. (9)
Review activity for Molecules. (2)
Review activity for PloS one. (5)
Review activity for Proceedings of the National Academy of Sciences of the United States of America. (2)
Review activity for Scientific reports. (1)
Review activity for Standards in genomic sciences. (1)
Review activity for Toxins. (27)
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