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Molecular dynamics, Protein language Models, Molecular Biology, Data Science, Statstical mechanics

Activities

Works (4)

Molecular Simulations to Investigate the Impact of N6-Methylation in RNA Recognition: Improving Accuracy and Precision of Binding Free Energy Prediction

The Journal of Physical Chemistry B
2024-09-19 | Journal article
Contributors: Valerio Piomponi; Miroslav Krepl; Jiri Sponer; Giovanni Bussi
Source: check_circle
Crossref

Molecular Dynamics Simulations of Chemically Modified Ribonucleotides

RNA Technologies
2023 | Book chapter
Part of ISBN: 9783031363894
Part of ISBN: 9783031363900
Part of ISSN: 2197-9731
Part of ISSN: 2197-9758
Contributors: Valerio Piomponi; Mattia Bernetti; Giovanni Bussi
Source: Self-asserted source
valerio piomponi

Alchemical Metadynamics: Adding Alchemical Variables to Metadynamics to Enhance Sampling in Free Energy Calculations

Journal of Chemical Theory and Computation
2023-03-28 | Journal article
Part of ISSN: 1549-9618
Part of ISSN: 1549-9626
Contributors: Wei-Tse Hsu; Valerio Piomponi; Pascal T. Merz; Giovanni Bussi; Michael Shirts
Source: Self-asserted source
valerio piomponi

Molecular Simulations Matching Denaturation Experiments for N<sup>6</sup>-Methyladenosine

ACS Central Science
2022-08-24 | Journal article
Part of ISSN: 2374-7943
Part of ISSN: 2374-7951
Contributors: Valerio Piomponi; Thorben Fröhlking; Mattia Bernetti; Giovanni Bussi
Source: Self-asserted source
valerio piomponi

Peer review (1 review for 1 publication/grant)

Review activity for The journal of physical chemistry letters. (1)