Personal information

Websites & social links

Ben's webpage at the Swiss Federal Research Institute WSL

Keywords

Evolutionary Biology, Ecological Genomics, Landscape Ecology

Countries

Switzerland

Activities

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Employment (2)

Swiss Federal Research Institute WSL: Birmensdorf, Zurich, CH

2021-01-01 to present | Researcher (Biodiversity and Conservation Biology)
Employment
Source: Self-asserted source
Benjamin Dauphin

Swiss Federal Research Institute WSL: Birmensdorf, Zurich, CH

2018-01-02 to 2020-12-31 | Post-Doc (Biodiversity and Conservation Biology)
Employment
Source: Self-asserted source
Benjamin Dauphin

Education and qualifications (1)

University of Neuchâtel: Neuchâtel, Neuchâtel, CH

2014-12-01 to 2017-11-30 | PhD Student (Evolutionary Botany)
Education
Source: Self-asserted source
Benjamin Dauphin

Works (30)

Resilience of genetic diversity in forest trees over the Quaternary

Nature Communications
2024-10-14 | Journal article
DOI: 10.1038/s41467-024-52612-y
Contributors: Pascal Milesi; Chedly Kastally; Benjamin Dauphin; Sandra Cervantes; Francesca Bagnoli; Katharina B. Budde; Stephen Cavers; Bruno Fady; Patricia Faivre-Rampant; Santiago C. González-Martínez et al.
Source: check_circle
Crossref

Genomic responses to climate: Understanding local adaptation in the Andean tree species Nothofagus pumilio and implications for a changing world

PLANTS, PEOPLE, PLANET
2024-07 | Journal article
DOI: 10.1002/ppp3.10504
Contributors: Jill Sekely; Paula Marchelli; Verónica Arana; Benjamin Dauphin; María Gabriela Mattera; Mario Pastorino; Ivan Scotti; Carolina Soliani; Katrin Heer; Lars Opgenoorth
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Crossref

Genetic underpinning of historical afforestation with allochthonous Pinus cembra in the northwestern Swiss Alps

Alpine Botany
2024-05 | Journal article
DOI: 10.1007/s00035-023-00304-6
Contributors: Vincent Sonnenwyl; Benjamin Dauphin; Yann Fragnière; Benoît Clément; Sandra Grünig; Sabine Brodbeck; Christian Parisod; Gregor Kozlowski; Felix Gugerli
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Crossref

Tracking signatures of selection in natural populations of ectomycorrhizal fungi – progress, challenges, and prospects

New Phytologist
2024-04 | Journal article
DOI: 10.1111/nph.19553
Contributors: Benjamin Dauphin; Martina Peter
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Crossref

A range‐wide postglacial history of Swiss stone pine based on molecular markers and palaeoecological evidence

Journal of Biogeography
2023-06 | Journal article
DOI: 10.1111/jbi.14586
Contributors: Felix Gugerli; Sabine Brodbeck; Bertalan Lendvay; Benjamin Dauphin; Francesca Bagnoli; Willem O. van der Knaap; Willy Tinner; Maria Höhn; Giovanni G. Vendramin; César Morales‐Molino et al.
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Crossref

Abiotic factors predict taxonomic composition and genetic admixture in populations of hybridizing white oak species (Quercus sect. Quercus) on regional scale

Tree Genetics & Genomes
2023-06 | Journal article
DOI: 10.1007/s11295-023-01598-7
Contributors: Oliver Reutimann; Benjamin Dauphin; Andri Baltensweiler; Felix Gugerli; Antoine Kremer; Christian Rellstab
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Crossref

Advancing research on ectomycorrhizal fungal adaptation with landscape genomics

Trends in Microbiology
2023-05 | Journal article
DOI: 10.1016/j.tim.2023.02.002
Contributors: Benjamin Dauphin; Martina Peter
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Crossref

Temperature and day length drive local adaptation in the Patagonian foundation tree speciesNothofagus pumilio

2023-04-29 | Preprint
DOI: 10.1101/2023.04.28.538677
Contributors: Jill Sekely; Paula Marchelli; Verónica Arana; Benjamin Dauphin; María Gabriela Mattera; Mario Pastorino; Ivan Scotti; Carolina Soliani; Katrin Heer; Lars Opgenoorth
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Crossref

Re-thinking the environment in landscape genomics

Trends in Ecology & Evolution
2023-03 | Journal article
DOI: 10.1016/j.tree.2022.10.010
Contributors: Benjamin Dauphin; Christian Rellstab; Rafael O. Wüest; Dirk N. Karger; Rolf Holderegger; Felix Gugerli; Stéphanie Manel
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Crossref

Resilience of genetic diversity in forest trees over the Quaternary

2023-01-06 | Preprint
DOI: 10.1101/2023.01.05.522822
Contributors: Pascal Milesi; Chedly Kastally; Benjamin Dauphin; Sandra Cervantes; Francesca Bagnoli; Katharina B. Budde; Stephen Cavers; Bruno Fady; Patricia Faivre-Rampant; Santiago C. González-Martínez et al.
Source: check_circle
Crossref

Hidden fairy rings and males—Genetic patterns of natural Burgundy truffle (Tuber aestivum Vittad.) populations reveal new insights into its life cycle

Environmental Microbiology
2022-12 | Journal article
DOI: 10.1111/1462-2920.16131
Contributors: Florian Staubli; Lea Imola; Benjamin Dauphin; Virginie Molinier; Stephanie Pfister; Yasmine Piñuela; Laura Schürz; Ludger Sproll; Brian S. Steidinger; Uli Stobbe et al.
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Crossref

Genetic basis of growth reaction to drought stress differs in contrasting high‐latitude treeline ecotones of a widespread conifer

Molecular Ecology
2022-10 | Journal article
DOI: 10.1111/mec.16648
Contributors: Melanie Zacharias; Timo Pampuch; Benjamin Dauphin; Lars Opgenoorth; Carl Roland; Martin Schnittler; Martin Wilmking; Manuela Bog; Katrin Heer
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Crossref

The fall of the summer truffle: Recurring hot, dry summers result in declining fruitbody production of <i>Tuber aestivum</i> in Central Europe

Global Change Biology
2022-10-06 | Journal article
DOI: 10.1111/gcb.16424
Part of ISSN: 1354-1013
Part of ISSN: 1365-2486
Contributors: Benjamin Dauphin
Source: Self-asserted source
Benjamin Dauphin

Transcriptome‐wide SNPs for Botrychium lunaria ferns enable fine‐grained analysis of ploidy and population structure

Molecular Ecology Resources
2022-01 | Journal article
DOI: 10.1111/1755-0998.13478
Contributors: Vinciane Mossion; Benjamin Dauphin; Jason Grant; Michael Kessler; Niklaus Zemp; Daniel Croll
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Crossref

A dormant resource for genome size estimation in ferns: C‐value inference of the Ophioglossaceae using herbarium specimen spores

Applications in Plant Sciences
2021-11 | Journal article
DOI: 10.1002/aps3.11452
Contributors: Li‐Yaung Kuo; Sheng Kai Tang; Tzu‐Tong Kao; Atsushi Ebihara; Susan Fawcett; Min‐Chien Hsiao; Wataru Shinohara; Benjamin Dauphin
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Crossref

Cryptic genetic structure and copy‐number variation in the ubiquitous forest symbiotic fungus Cenococcum geophilum

Environmental Microbiology
2021-11 | Journal article
DOI: 10.1111/1462-2920.15752
Contributors: Benjamin Dauphin; Maíra de Freitas Pereira; Annegret Kohler; Igor V. Grigoriev; Kerrie Barry; Hyunsoo Na; Mojgan Amirebrahimi; Anna Lipzen; Francis Martin; Martina Peter et al.
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Crossref

Cryptic genetic structure and copy-number variation in the ubiquitous forest symbiotic fungus Cenococcum geophilum

2021-07-29 | Other
DOI: 10.1101/2021.07.29.454341
Contributors: Benjamin Dauphin; Maíra de Freitas Pereira; Annegret Kohler; Igor V. Grigoriev; Kerrie Barry; Hyunsoo Na; Mojgan Amirebrahimi; Anna Lipzen; Francis Martin; Martina Peter et al.
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Crossref

Prospects and limitations of genomic offset in conservation management

Evolutionary Applications
2021-05 | Journal article
DOI: 10.1111/eva.13205
Contributors: Christian Rellstab; Benjamin Dauphin; Moises Exposito‐Alonso
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Crossref

Genomic vulnerability to rapid climate warming in a tree species with a long generation time

Global Change Biology
2021-03 | Journal article
DOI: 10.1111/gcb.15469
Contributors: Benjamin Dauphin; Christian Rellstab; Max Schmid; Stefan Zoller; Dirk N. Karger; Sabine Brodbeck; Frédéric Guillaume; Felix Gugerli
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Crossref

The GenTree Platform: growth traits and tree-level environmental data in 12 European forest tree species

GigaScience
2021-03-18 | Journal article
DOI: 10.1093/gigascience/giab010
Part of ISSN: 2047-217X
Contributors: Benjamin Dauphin
Source: Self-asserted source
Benjamin Dauphin

Outcrossing Mating System of the Early-Divergent Moonwort Fern (Botrychium lunaria, Ophioglossaceae) Revealed in the European Alps

International Journal of Plant Sciences
2020-11-01 | Journal article
DOI: 10.1086/710491
Source: Self-asserted source
Benjamin Dauphin

Disentangling the effects of geographic peripherality and habitat suitability on neutral and adaptive genetic variation in Swiss stone pine

Molecular Ecology
2020-06 | Journal article
DOI: 10.1111/mec.15467
Contributors: Benjamin Dauphin; Rafael O. Wüest; Sabine Brodbeck; Stefan Zoller; Martin C. Fischer; Rolf Holderegger; Felix Gugerli; Christian Rellstab
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Crossref

Biotic and abiotic factors shape arbuscular mycorrhizal fungal communities associated with the roots of the widespread fern Botrychium lunaria (Ophioglossaceae)

Environmental Microbiology Reports
2020-06-01 | Journal article
DOI: 10.1111/1758-2229.12840
Source: Self-asserted source
Benjamin Dauphin

The GenTree Dendroecological Collection, tree-ring and wood density data from seven tree species across Europe

Scientific Data
2020-01-01 | Journal article
DOI: 10.1038/s41597-019-0340-y
Source: Self-asserted source
Benjamin Dauphin

Using transcriptome sequencing and pooled exome capture to study local adaptation in the giga‐genome of Pinus cembra

Molecular Ecology Resources
2019-03 | Journal article
DOI: 10.1111/1755-0998.12986
Contributors: Christian Rellstab; Benjamin Dauphin; Stefan Zoller; Sabine Brodbeck; Felix Gugerli
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Crossref

Rapid allopolyploid radiation of moonwort ferns (Botrychium; Ophioglossaceae) revealed by PacBio sequencing of homologous and homeologous nuclear regions

Molecular Phylogenetics and Evolution
2018-03 | Journal article
DOI: 10.1016/j.ympev.2017.11.025
Contributors: Benjamin Dauphin; Jason R. Grant; Donald R. Farrar; Carl J. Rothfels
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Crossref

A Worldwide Molecular Phylogeny Provides New Insight on Cryptic Diversity Within the Moonworts (Botrychium s. s., Ophioglossaceae)

Systematic Botany
2017-12-18 | Journal article
DOI: 10.1600/036364417x696483
Source: Self-asserted source
Benjamin Dauphin

A community-derived classification for extant lycophytes and ferns

Journal of Systematics and Evolution
2016-11-01 | Journal article
DOI: 10.1111/jse.12229
Source: Self-asserted source
Benjamin Dauphin

Ploidy level and genome size variation in the homosporous ferns Botrychium s.l. (Ophioglossaceae)

Plant Systematics and Evolution
2016-05-01 | Journal article
DOI: 10.1007/s00606-016-1285-7
Source: Self-asserted source
Benjamin Dauphin

Molecular phylogenetics supports widespread cryptic species in moonworts (Botrychium s.s., Ophioglossaceae)

American Journal of Botany
2014-01-01 | Journal article
DOI: 10.3732/ajb.1300154
Source: Self-asserted source
Benjamin Dauphin

Peer review (2 reviews for 2 publications/grants)

Review activity for ISME communications. (1)
Review activity for Nature communications (1)
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