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Loop profile: 22491
Scopus Author ID: 7004438208
ResearcherID: ABE-6271-2020

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Epigenetic state and gene expression remain stable after CRISPR/Cas‐mediated chromosomal inversions

New Phytologist
2025-03 | Journal article
DOI: 10.1111/nph.20403
Contributors: Solmaz Khosravi; Rebecca Hinrichs; Michelle Rönspies; Reza Haghi; Holger Puchta; Andreas Houben
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Chromosome engineering points to the cis‐acting mechanism of chromosome arm‐specific telomere length setting and robustness of plant phenotype, chromatin structure and gene expression

The Plant Journal
2025-02 | Journal article
DOI: 10.1111/tpj.70024
Contributors: Ondřej Helia; Barbora Matúšová; Kateřina Havlová; Anna Hýsková; Martin Lyčka; Natalja Beying; Holger Puchta; Jiří Fajkus; Miloslava Fojtová
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Epigenetic state and gene expression remain stable after CRISPR/Cas-mediated chromosomal inversions

2024-10-18 | Preprint
DOI: 10.1101/2024.10.15.618494
Contributors: Solmaz Khosravi; Rebecca Hinrichs; Michelle Rönspies; Reza Haghi; Holger Puchta; Andreas Houben
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Protocol to efficiently induce CRISPR-Kill-mediated cell ablation in Arabidopsis thaliana

STAR Protocols
2024-06 | Journal article
DOI: 10.1016/j.xpro.2024.103072
Contributors: Fabienne Gehrke; Sebastian Wolf; Holger Puchta
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Deficiency of both classical and alternative end‐joining pathways leads to a synergistic defect in double‐strand break repair but not to an increase in homology‐dependent gene targeting in Arabidopsis

The Plant Journal
2024-04 | Journal article
DOI: 10.1111/tpj.16604
Contributors: Laura Merker; Laura Feller; Annika Dorn; Holger Puchta
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Increasing deletion sizes and the efficiency of CRISPR/Cas9‐mediated mutagenesis by SunTag‐mediated TREX1 recruitment

The Plant Journal
2024-04 | Journal article
DOI: 10.1111/tpj.16586
Contributors: Niklas Capdeville; Patrick Schindele; Holger Puchta
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Optimizing ErCas12a for efficient gene editing in Arabidopsis thaliana

Plant Biotechnology Journal
2024-02 | Journal article
DOI: 10.1111/pbi.14194
Contributors: Janine Pietralla; Niklas Capdeville; Patrick Schindele; Holger Puchta
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Plant chromosome engineering – past, present and future

New Phytologist
2024-01 | Journal article
DOI: 10.1111/nph.19414
Contributors: Holger Puchta; Andreas Houben
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Regulation of gene-edited plants in Europe: from the valley of tears into the shining sun?

aBIOTECH
2023-12-28 | Journal article
DOI: 10.1007/s42994-023-00130-8
Contributors: Holger Puchta
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An inducible CRISPR‐Kill system for temporally controlled cell type‐specific cell ablation in Arabidopsis thaliana

New Phytologist
2023-09 | Journal article
DOI: 10.1111/nph.19102
Contributors: Fabienne Gehrke; Paola Ruiz‐Duarte; Angelina Schindele; Sebastian Wolf; Holger Puchta
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The power of repetition

Nature Plants
2023-08-31 | Journal article
DOI: 10.1038/s41477-023-01496-9
Contributors: Holger Puchta
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SMC5/6 complex-mediated SUMOylation stimulates DNA–protein cross-link repair in Arabidopsis

The Plant Cell
2023-04-20 | Journal article
DOI: 10.1093/plcell/koad020
Contributors: Eva Dvořák Tomaštíková; Klara Prochazkova; Fen Yang; Jitka Jemelkova; Andreas Finke; Annika Dorn; Mahmoud Said; Holger Puchta; Ales Pecinka
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Enhancing gene editing and gene targeting efficiencies in Arabidopsis thaliana by using an intron‐containing version of ttLbCas12a

Plant Biotechnology Journal
2023-03 | Journal article
DOI: 10.1111/pbi.13964
Contributors: Patrick Schindele; Laura Merker; Tom Schreiber; Anja Prange; Alain Tissier; Holger Puchta
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Getting better all the time — recent progress in the development of CRISPR/Cas-based tools for plant genome engineering

Current Opinion in Biotechnology
2023-02 | Journal article
DOI: 10.1016/j.copbio.2022.102854
Contributors: Niklas Capdeville; Patrick Schindele; Holger Puchta
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Redirecting meiotic recombination by CRISPR-Cas-mediated chromosome engineering

Nature Plants
2022 | Journal article
DOI: 10.1038/S41477-022-01239-2
WOSUID: WOS:000857779400001
Contributors: Roenspies, Michelle; Puchta, Holger
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Massive crossover suppression by CRISPR–Cas-mediated plant chromosome engineering

Nature Plants
2022-09-15 | Journal article
DOI: 10.1038/s41477-022-01238-3
Contributors: Michelle Rönspies; Carla Schmidt; Patrick Schindele; Michal Lieberman-Lazarovich; Andreas Houben; Holger Puchta
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CRISPR–Cas9-mediated chromosome engineering in Arabidopsis thaliana

Nature Protocols
2022-05 | Journal article
DOI: 10.1038/s41596-022-00686-7
Contributors: Michelle Rönspies; Patrick Schindele; Rebecca Wetzel; Holger Puchta
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Nonhomologous end joining as key to CRISPR/Cas-mediated plant chromosome engineering

Plant Physiology
2022-03-28 | Journal article
DOI: 10.1093/plphys/kiab572
Contributors: Fabienne Gehrke; Angelina Schindele; Holger Puchta
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Updates on gene editing and its applications

Plant Physiology
2022-03-28 | Journal article
DOI: 10.1093/plphys/kiac032
Contributors: Holger Puchta; Jiming Jiang; Kan Wang; Yunde Zhao
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Using CRISPR-Kill for organ specific cell elimination by cleavage of tandem repeats

Nature Communications
2022-03-21 | Journal article
DOI: 10.1038/s41467-022-29130-w
Contributors: Angelina Schindele; Fabienne Gehrke; Carla Schmidt; Sarah Röhrig; Annika Dorn; Holger Puchta
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The DNA‐dependent protease AtWSS1A suppresses persistent double strand break formation during replication

New Phytologist
2022-02 | Journal article
DOI: 10.1111/nph.17848
Contributors: Leonie Hacker; Niklas Capdeville; Laura Feller; Janina Enderle‐Kukla; Annika Dorn; Holger Puchta
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Massive Crossover Suppression by CRISPR-Cas-mediated Plant Chromosome Engineering

2022-01-20 | Preprint
DOI: 10.21203/rs.3.rs-1257133/v1
Contributors: Michelle Rönspies; Carla Schmidt; Michal Lieberman-Lazarovich; Patrick Schindele; Andreas Houben; Holger Puchta
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The repair of topoisomerase 2 cleavage complexes in Arabidopsis

The Plant Cell
2022-01-20 | Journal article
DOI: 10.1093/plcell/koab228
Contributors: Leonie Hacker; Annika Dorn; Janina Enderle; Holger Puchta
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Sophisticated CRISPR/Cas tools for fine-tuning plant performance

Journal of Plant Physiology
2021 | Journal article
DOI: 10.1016/J.JPLPH.2020.153332
WOSUID: WOS:000620292100001
Contributors: Capdeville, Niklas; Merker, Laura; Schindele, Patrick; Puchta, Holger
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Different DNA repair pathways are involved in single-strand break-induced genomic changes in plants

The Plant Cell
2021-11-04 | Journal article
DOI: 10.1093/plcell/koab204
Contributors: Felix Wolter; Patrick Schindele; Natalja Beying; Armin Scheben; Holger Puchta
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Novel CRISPR/Cas applications in plants: from prime editing to chromosome engineering

Transgenic Research
2021-08-01 | Journal article
DOI: 10.1007/s11248-021-00238-x
Contributors: Teng-Kuei Huang; Holger Puchta
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Efficient gene targeting in Nicotiana tabacum using CRISPR/SaCas9 and temperature tolerant LbCas12a

Plant Biotechnology Journal
2021-07 | Journal article
DOI: 10.1111/pbi.13546
Contributors: Teng‐Kuei Huang; Brittney Armstrong; Patrick Schindele; Holger Puchta
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Different functional roles of RTR complex factors in DNA repair and meiosis in Arabidopsis and tomato

The Plant Journal
2021-05 | Journal article
DOI: 10.1111/tpj.15211
Contributors: Amy Leanne Whitbread; Annika Dorn; Sarah Röhrig; Holger Puchta
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CRISPR–Cas-mediated chromosome engineering for crop improvement and synthetic biology

Nature Plants
2021-05-06 | Journal article
DOI: 10.1038/s41477-021-00910-4
Contributors: Michelle Rönspies; Annika Dorn; Patrick Schindele; Holger Puchta
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ZYP1 is required for obligate cross-over formation and cross-over interference in Arabidopsis

Proceedings of the National Academy of Sciences
2021-04-06 | Journal article
DOI: 10.1073/pnas.2021671118
Contributors: Martin G. France; Janina Enderle; Sarah Röhrig; Holger Puchta; F. Chris H. Franklin; James D. Higgins
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CRISPR/Cas-mediated chromosome engineering: opening up a new avenue for plant breeding

Journal of Experimental Botany
2021-02-02 | Journal article
DOI: 10.1093/jxb/eraa463
Contributors: Michelle Rönspies; Patrick Schindele; Holger Puchta; John Lunn
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Analyzing Somatic DNA Repair in Arabidopsis Meiotic Mutants

Methods in Molecular Biology
2020 | Journal article
DOI: 10.1007/978-1-4939-9818-0_25
WOSUID: WOS:000558679100026
Contributors: Dorn, Annika; Puchta, Holger
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Application of Aptamers Improves CRISPR-Based Live Imaging of Plant Telomeres

Frontiers in Plant Science
2020 | Journal article
DOI: 10.3389/FPLS.2020.01254
WOSUID: WOS:000566167000001
Contributors: Khosravi, Solmaz; Schindele, Patrick; Gladilin, Evgeny; Dunemann, Frank; Rutten, Twan; Puchta, Holger; Houben, Andreas
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Application of CRISPR/Cas-mediated base editing for directed protein evolution in plants

Science China Life Sciences
2020 | Journal article
DOI: 10.1007/S11427-020-1655-9
WOSUID: WOS:000518479100001
Contributors: Capdeville, Niklas; Schindele, Patrick; Puchta, Holger
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CRISPR Guide RNA Design Guidelines for Efficient Genome Editing

Methods in Molecular Biology
2020 | Journal article
DOI: 10.1007/978-1-0716-0712-1_19
WOSUID: WOS:000681399000020
Contributors: Schindele, Patrick; Wolter, Felix; Puchta, Holger
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CRISPR/Cas brings plant biology and breeding into the fast lane

Current Opinion in Biotechnology
2020 | Journal article
DOI: 10.1016/J.COPBIO.2019.08.006
WOSUID: WOS:000527917900004
Contributors: Schindele, Angelina; Dorn, Annika; Puchta, Holger
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Live-Cell CRISPR Imaging in Plant Cells with a Telomere-Specific Guide RNA

Methods in Molecular Biology
2020 | Journal article
DOI: 10.1007/978-1-0716-0712-1_20
WOSUID: WOS:000681399000021
Contributors: Khosravi, Solmaz; Dreissig, Steven; Schindele, Patrick; Wolter, Felix; Rutten, Twan; Puchta, Holger; Houben, Andreas
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Repair of DNA-protein crosslinks in plants

DNA Repair
2020 | Journal article
DOI: 10.1016/J.DNAREP.2020.102787
WOSUID: WOS:000517659800001
Contributors: Hacker, Leonie; Dorn, Annika; Puchta, Holger
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WITHDRAWN: DNA-protein crosslink repair in plants (Retraction of 10.1016/J.DNAREP.2020.102787)

DNA Repair
2020 | Journal article
DOI: 10.1016/J.DNAREP.2020.102786
WOSUID: WOS:000518873400002
Contributors: Hacker, Leonie; Dorn, Annika; Puchta, Holger
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Enhancing in planta gene targeting efficiencies in Arabidopsis using temperature‐tolerant CRISPR/LbCas12a

Plant Biotechnology Journal
2020-12 | Journal article
DOI: 10.1111/pbi.13426
Contributors: Laura Merker; Patrick Schindele; Teng‐Kuei Huang; Felix Wolter; Holger Puchta
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DNA repair meets climate change

Nature Plants
2020-11-16 | Journal article
DOI: 10.1038/s41477-020-00804-x
Contributors: Annika Dorn; Holger Puchta
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Changing local recombination patterns in Arabidopsis by CRISPR/Cas mediated chromosome engineering

Nature Communications
2020-09-04 | Journal article
DOI: 10.1038/s41467-020-18277-z
Contributors: Carla Schmidt; Paul Fransz; Michelle Rönspies; Steven Dreissig; Jörg Fuchs; Stefan Heckmann; Andreas Houben; Holger Puchta
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Engineering CRISPR/LbCas12a for highly efficient, temperature‐tolerant plant gene editing

Plant Biotechnology Journal
2020-05 | Journal article
DOI: 10.1111/pbi.13275
Contributors: Patrick Schindele; Holger Puchta
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CRISPR–Cas9-mediated induction of heritable chromosomal translocations in Arabidopsis

Nature Plants
2020-05-25 | Journal article
DOI: 10.1038/s41477-020-0663-x
Contributors: Natalja Beying; Carla Schmidt; Michael Pacher; Andreas Houben; Holger Puchta
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Application of aptamers improves CRISPR-based live imaging of plant telomeres

2020-05-06 | Preprint
DOI: 10.1101/2020.05.05.078246
Contributors: Solmaz Khosravi; Patrick Schindele; Evgeny Gladilin; Frank Dunemann; Twan Rutten; Holger Puchta; Andreas Houben
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From gene editing to genome engineering: restructuring plant chromosomes via CRISPR/Cas

aBIOTECH
2020-01-09 | Journal article
DOI: 10.1007/s42994-019-00002-0
Contributors: Carla Schmidt; Patrick Schindele; Holger Puchta
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better food faster

Chemistry & Industry
2019 | Journal article
DOI: 10.1002/CIND.832_8.X
WOSUID: WOS:000458305700018
Contributors: Puchta, Holger
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CRISPR/Cas-mediated gene targeting in plants: finally a turn for the better for homologous recombination

Plant Cell Reports
2019 | Journal article
DOI: 10.1007/s00299-019-02379-0
EID:

2-s2.0-85060613875
Contributors: Huang, T.-K.; Puchta, H.
Source: Self-asserted source
Holger Puchta via Scopus - Elsevier
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DNA break repair in plants and its application for genome engineering

Methods in Molecular Biology
2019 | Book chapter
DOI: 10.1007/978-1-4939-8778-8_17
EID:

2-s2.0-85056312999
Contributors: Schmidt, C.; Pacher, M.; Puchta, H.
Source: Self-asserted source
Holger Puchta via Scopus - Elsevier
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Plant breeding at the speed of light: the power of CRISPR/Cas to generate directed genetic diversity at multiple sites

BMC Plant Biology
2019 | Journal article
DOI: 10.1186/S12870-019-1775-1
WOSUID: WOS:000466982700002
Contributors: Wolter, Felix; Schindele, Patrick; Puchta, Holger
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