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Works (48)

Measurement of Neurotransmitters and Metabolites in Cell Culture and In Vitro Using Genetically Encoded PBP-Based Biosensors

2025 | Book chapter
DOI: 10.1007/978-1-0716-4284-9_14
Contributors: Jonathan S. Marvin
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iATPSnFR2: A high-dynamic-range fluorescent sensor for monitoring intracellular ATP

Proceedings of the National Academy of Sciences
2024-05-21 | Journal article
DOI: 10.1073/pnas.2314604121
Contributors: Jonathan S. Marvin; Alexandros C. Kokotos; Mukesh Kumar; Camila Pulido; Ariana N. Tkachuk; Jocelyn Shuxin Yao; Timothy A. Brown; Timothy A. Ryan
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Extracellular glutamate and GABA transients at the transition from interictal spiking to seizures

Brain
2024-03-01 | Journal article
DOI: 10.1093/brain/awad336
Contributors: Yoshiteru Shimoda; Marco Leite; Robert T Graham; Jonathan S Marvin; Jeremy Hasseman; Ilya Kolb; Loren L Looger; Vincent Magloire; Dimitri M Kullmann
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High-Performance Genetically Encoded Green Fluorescent Biosensors for Intracellular l-Lactate

ACS Central Science
2024-02-28 | Journal article
DOI: 10.1021/acscentsci.3c01250
Contributors: Saaya Hario; Giang N. T. Le; Hikaru Sugimoto; Kei Takahashi-Yamashiro; Suguru Nishinami; Hirofumi Toda; Selene Li; Jonathan S. Marvin; Shinya Kuroda; Mikhail Drobizhev et al.
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An engineered biosensor enables dynamic aspartate measurements in living cells

eLife
2024-02-23 | Journal article
DOI: 10.7554/eLife.90024
Contributors: Kristian Davidsen; Jonathan S Marvin; Abhi Aggarwal; Timothy A Brown; Lucas B Sullivan
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Crossref

An engineered biosensor enables dynamic aspartate measurements in living cells

eLife
2024-02-23 | Journal article
DOI: 10.7554/eLife.90024.3
Contributors: Kristian Davidsen; Jonathan S Marvin; Abhi Aggarwal; Timothy A Brown; Lucas B Sullivan
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An engineered biosensor enables dynamic aspartate measurements in living cells

2024-01-26 | Preprint
DOI: 10.7554/eLife.90024.2
Contributors: Kristian Davidsen; Jonathan S Marvin; Abhi Aggarwal; Timothy A Brown; Lucas B Sullivan
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Direct measurement of dynamic attractant gradients reveals breakdown of the Patlak–Keller–Segel chemotaxis model

Proceedings of the National Academy of Sciences
2024-01-16 | Journal article
DOI: 10.1073/pnas.2309251121
Contributors: Trung V. Phan; Henry H. Mattingly; Lam Vo; Jonathan S. Marvin; Loren L. Looger; Thierry Emonet
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An engineered biosensor enables dynamic aspartate measurements in living cells

2023-08-31 | Preprint
DOI: 10.7554/eLife.90024.1
Contributors: Kristian Davidsen; Jonathan S Marvin; Abhi Aggarwal; Timothy A Brown; Lucas B Sullivan
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An engineered biosensor enables dynamic aspartate measurements in living cells

2023-06-27 | Preprint
DOI: 10.1101/2023.06.27.546775
Contributors: Kristian Davidsen; Jonathan S Marvin; Abhi Aggarwal; Timothy A Brown; Lucas B Sullivan
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Direct measurement of dynamic attractant gradients reveals breakdown of the Patlak-Keller-Segel chemotaxis model

2023-06-05 | Preprint
DOI: 10.1101/2023.06.01.543315
Contributors: Trung V. Phan; Henry H. Mattingly; Lam Vo; Jonathan S. Marvin; Loren L. Looger; Thierry Emonet
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Crossref

Selective Serotonin Reuptake Inhibitors Within Cells: Temporal Resolution in Cytoplasm, Endoplasmic Reticulum, and Membrane

2022-08-12 | Preprint
DOI: 10.1101/2022.08.09.502705
Contributors: Aaron L. Nichols; Zack Blumenfeld; Laura Luebbert; Hailey J. Knox; Anand K. Muthusamy; Jonathan S. Marvin; Charlene H. Kim; Stephen N. Grant; David P. Walton; Bruce N. Cohen et al.
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Three Mutations Convert the Selectivity of a Protein Sensor from Nicotinic Agonists to S-Methadone for Use in Cells, Organelles, and Biofluids

Journal of the American Chemical Society
2022-05-18 | Journal article
DOI: 10.1021/jacs.2c02323
Contributors: Anand K. Muthusamy; Charlene H. Kim; Scott C. Virgil; Hailey J. Knox; Jonathan S. Marvin; Aaron L. Nichols; Bruce N. Cohen; Dennis A. Dougherty; Loren L. Looger; Henry A. Lester
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Three Mutations Convert the Selectivity of a Protein Sensor from Nicotinic Agonists to S-methadone for Use in Cells, Organelles, and Biofluids

2022-02-26 | Preprint
DOI: 10.1101/2022.02.24.481226
Contributors: Anand K. Muthusamy; Charlene H. Kim; Scott C. Virgil; Hailey J. Knox; Jonathan S. Marvin; Aaron L. Nichols; Bruce N. Cohen; Dennis A. Dougherty; Loren L. Looger; Henry A. Lester
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The functional organization of excitatory synaptic input to place cells

Nature Communications
2021-06-11 | Journal article
DOI: 10.1038/s41467-021-23829-y
Contributors: Michael D. Adoff; Jason R. Climer; Heydar Davoudi; Jonathan S. Marvin; Loren L. Looger; Daniel A. Dombeck
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jYCaMP: an optimized calcium indicator for two-photon imaging at fiber laser wavelengths

Nature Methods
2020-07-25 | Journal article
DOI: 10.1038/s41592-020-0835-7
Contributors: Manuel Alexander Mohr; Daniel Bushey; Abhi Aggarwal; Jonathan S. Marvin; Jeong Jun Kim; Emiliano Jimenez Marquez; Yajie Liang; Ronak Patel; John J. Macklin; Chi-Yu Lee et al.
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Nanoscopic Visualization of Restricted Nonvolume Cholinergic and Monoaminergic Transmission with Genetically Encoded Sensors

Nano Letters
2020-06-10 | Journal article
DOI: 10.1021/acs.nanolett.9b04877
Contributors: Paula K. Zhu; W. Sharon Zheng; Peng Zhang; Miao Jing; Philip M. Borden; Farhan Ali; Kaiming Guo; Jiesi Feng; Jonathan S. Marvin; Yali Wang et al.
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A fast genetically encoded fluorescent sensor for faithfulin vivoacetylcholine detection in mice, fish, worms and flies

2020-02-08 | Preprint
DOI: 10.1101/2020.02.07.939504
Contributors: Philip M. Borden; Peng Zhang; Amol V. Shivange; Jonathan S. Marvin; Joseph Cichon; Chuntao Dan; Kaspar Podgorski; Antonio Figueiredo; Ondrej Novak; Masashi Tanimoto et al.
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jYCaMP: An optimized calcium indicator for two-photon imaging at fiber laser wavelengths

2019-10-25 | Other
DOI: 10.1101/816660
Contributors: Manuel Alexander Mohr; Daniel Bushey; Abhi Aggarwal; Jonathan S. Marvin; Emiliano Jimenez Marquez; Yajie Liang; Ronak Patel; John J. Macklin; Chi-Yu Lee; Douglas S. Kim et al.
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Crossref

Author Correction: Kilohertz frame-rate two-photon tomography

Nature Methods
2019-09-06 | Journal article
DOI: 10.1038/s41592-019-0545-1
Contributors: Abbas Kazemipour; Ondrej Novak; Daniel Flickinger; Jonathan S. Marvin; Ahmed S. Abdelfattah; Jonathan King; Philip M. Borden; Jeong Jun Kim; Sarah H. Al-Abdullatif; Parker E. Deal et al.
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Crossref

Kilohertz frame-rate two-photon tomography

Nature Methods
2019-08 | Journal article
DOI: 10.1038/s41592-019-0493-9
Contributors: Abbas Kazemipour; Ondrej Novak; Daniel Flickinger; Jonathan S. Marvin; Ahmed S. Abdelfattah; Jonathan King; Philip M. Borden; Jeong Jun Kim; Sarah H. Al-Abdullatif; Parker E. Deal et al.
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Crossref

Quantitative in vivo imaging of neuronal glucose concentrations with a genetically encoded fluorescence lifetime sensor

Journal of Neuroscience Research
2019-08 | Journal article
DOI: 10.1002/jnr.24433
Contributors: Carlos Manlio Díaz‐García; Carolina Lahmann; Juan Ramón Martínez‐François; Binsen Li; Dorothy Koveal; Nidhi Nathwani; Mahia Rahman; Jacob P. Keller; Jonathan S. Marvin; Loren L. Looger et al.
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A genetically encoded fluorescent sensor for in vivo imaging of GABA

Nature Methods
2019-08-15 | Journal article
DOI: 10.1038/s41592-019-0471-2
Contributors: Jonathan S. Marvin; Yoshiteru Shimoda; Vincent Magloire; Marco Leite; Takashi Kawashima; Thomas P. Jensen; Ilya Kolb; Erika L. Knott; Ondrej Novak; Kaspar Podgorski et al.
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Direct wavefront sensing enables functional imaging of infragranular axons and spines

Nature Methods
2019-07 | Journal article
DOI: 10.1038/s41592-019-0434-7
Contributors: Rui Liu; Zengyi Li; Jonathan S. Marvin; David Kleinfeld
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Crossref

Author Correction: Stability, affinity, and chromatic variants of the glutamate sensor iGluSnFR

Nature Methods
2019-04 | Journal article
DOI: 10.1038/s41592-019-0363-5
Contributors: Jonathan S. Marvin; Benjamin Scholl; Daniel E. Wilson; Kaspar Podgorski; Abbas Kazemipour; Johannes Alexander Müller; Susanne Schoch; Francisco José Urra Quiroz; Nelson Rebola; Huan Bao et al.
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Multiplex imaging relates quantal glutamate release to presynaptic Ca2+ homeostasis at multiple synapses in situ

Nature Communications
2019-03-29 | Journal article
DOI: 10.1038/s41467-019-09216-8
Contributors: Thomas P. Jensen; Kaiyu Zheng; Nicholas Cole; Jonathan S. Marvin; Loren L. Looger; Dmitri A. Rusakov
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In vivo glucose imaging in multiple model organisms with an engineered single-wavelength sensor

2019-03-08 | Other
DOI: 10.1101/571422
Contributors: Jacob P. Keller; Jonathan S. Marvin; Haluk Lacin; William C. Lemon; Jamien Shea; Soomin Kim; Richard T. Lee; Minoru Koyama; Philipp J. Keller; Loren L. Looger
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Crossref

Publisher Correction: Stability, affinity, and chromatic variants of the glutamate sensor iGluSnFR

Nature Methods
2019-02 | Journal article
DOI: 10.1038/s41592-018-0300-z
Contributors: Jonathan S. Marvin; Benjamin Scholl; Daniel E. Wilson; Kaspar Podgorski; Abbas Kazemipour; Johannes Alexander Müller; Susanne Schoch; Francisco José Urra Quiroz; Nelson Rebola; Huan Bao et al.
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Crossref

Stability, affinity, and chromatic variants of the glutamate sensor iGluSnFR

Nature Methods
2018-11 | Journal article
DOI: 10.1038/s41592-018-0171-3
Contributors: Jonathan S. Marvin; Benjamin Scholl; Daniel E. Wilson; Kaspar Podgorski; Abbas Kazemipour; Johannes Alexander Müller; Susanne Schoch; Francisco José Urra Quiroz; Nelson Rebola; Huan Bao et al.
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Crossref

Falling apart

Elife
2016 | Journal article
Source: Self-asserted source
Jonathan Marvin

Conditions and constraints for astrocyte calcium signaling in the hippocampal mossy fiber pathway

Neuron
2014 | Journal article
Source: Self-asserted source
Jonathan Marvin

Role of adaptor TrfA and ClpPC in controlling levels of SsrA-tagged proteins and antitoxins in Staphylococcus aureus

J. Bacteriol.
2014 | Journal article
Source: Self-asserted source
Jonathan Marvin

An optimized fluorescent probe for visualizing glutamate neurotransmission

Nat. Methods
2013 | Journal article
Source: Self-asserted source
Jonathan Marvin

Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics

Front Mol Neurosci
2013 | Journal article
Source: Self-asserted source
Jonathan Marvin

Two-photon imaging of nonlinear glutamate release dynamics at bipolar cell synapses in the mouse retina

J. Neurosci.
2013 | Journal article
Source: Self-asserted source
Jonathan Marvin

Optimization of a GCaMP calcium indicator for neural activity imaging

J. Neurosci.
2012 | Journal article
Source: Self-asserted source
Jonathan Marvin

A genetically encoded, high-signal-to-noise maltose sensor

Proteins
2011 | Journal article
Source: Self-asserted source
Jonathan Marvin

Structure of the Escherichia coli phosphonate binding protein PhnD and rationally optimized phosphonate biosensors

J. Mol. Biol.
2011 | Journal article
Source: Self-asserted source
Jonathan Marvin

Crystal structures of the GCaMP calcium sensor reveal the mechanism of fluorescence signal change and aid rational design

J. Biol. Chem.
2009 | Journal article
Source: Self-asserted source
Jonathan Marvin

Engineering human IgG1 affinity to human neonatal Fc receptor: impact of affinity improvement on pharmacokinetics in primates

J. Immunol.
2009 | Journal article
Source: Self-asserted source
Jonathan Marvin

Crystallization and preliminary X-ray characterization of the genetically encoded fluorescent calcium indicator protein GCaMP2

Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun.
2008 | Journal article
Source: Self-asserted source
Jonathan Marvin

Bispecific antibodies for dual-modality cancer therapy: killing two signaling cascades with one stone

Curr Opin Drug Discov Devel
2006 | Journal article
Source: Self-asserted source
Jonathan Marvin

Recombinant approaches to IgG-like bispecific antibodies

Acta Pharmacol. Sin.
2005 | Journal article
Source: Self-asserted source
Jonathan Marvin

Redesigning an antibody fragment for faster association with its antigen

Biochemistry
2003 | Journal article
Source: Self-asserted source
Jonathan Marvin

Conversion of a maltose receptor into a zinc biosensor by computational design

Proc. Natl. Acad. Sci. U.S.A.
2001 | Journal article
Source: Self-asserted source
Jonathan Marvin

Manipulation of ligand binding affinity by exploitation of conformational coupling

Nat. Struct. Biol.
2001 | Journal article
Source: Self-asserted source
Jonathan Marvin

Protein engineering and the development of generic biosensors

Trends Biotechnol.
1998 | Journal article
Source: Self-asserted source
Jonathan Marvin

The rational design of allosteric interactions in a monomeric protein and its applications to the construction of biosensors

Proc. Natl. Acad. Sci. U.S.A.
1997 | Journal article
Source: Self-asserted source
Jonathan Marvin
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