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ResearcherID: G-9174-2014
Scopus Author ID: 55922179400

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Page 1 of 2

Design of Zn‐Binding Peptide(s) from Protein Fragments

ChemBioChem
2025-04 | Journal article
DOI: 10.1002/cbic.202401014
Contributors: Ján Michael Kormaník; Daniel Herman; Erik Andris; Martin Culka; Ondrej Gutten; Milan Kožíšek; Lucie Bednárová; Pavel Srb; Václav Veverka; Lubomír Rulíšek
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Crossref

Genomic context-dependent histone H3K36 methylation by three Drosophila methyltransferases and implications for dedicated chromatin readers

Nucleic Acids Research
2025-03-20 | Journal article
DOI: 10.1093/nar/gkaf202
Contributors: Muhunden Jayakrishnan; Magdalena Havlová; Václav Veverka; Catherine Regnard; Peter B Becker
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Rational fragment-based design of compounds targeting the PWWP domain of the HRP family

European Journal of Medicinal Chemistry
2024-12 | Journal article
DOI: 10.1016/j.ejmech.2024.116960
Part of ISSN: 0223-5234
Contributors: Thibault Vantieghem; Nayyar A. Aslam; Evgenii M. Osipov; Muluembet Akele; Siska Van Belle; Steven Beelen; Matúš Drexler; Terezia Paulovcakova; Vanda Lux; Daren Fearon et al.
Source: Self-asserted source
Vaclav Veverka

The histone chaperone Spt6 controls chromatin structure through its conserved N-terminal domain

2024-11-26 | Preprint
DOI: 10.1101/2024.11.25.625227
Contributors: James L. Warner; Vanda Lux; Václav Veverka; Fred Winston
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Crossref

Structural basis of MICAL autoinhibition

Nature Communications
2024-11-12 | Journal article | Author
DOI: 10.1038/s41467-024-54131-2
Part of ISSN: 2041-1723
Contributors: Matej Horvath; Adam Schrofel; Karolina Kowalska; Ján Sabó; Jonáš Vlasák; Farahdokht Nourisanami; Margarita Sobol; Daniel Pinkas; Krystof Knapp; Nicola Koupilova et al.
Source: Self-asserted source
Vaclav Veverka

NMR Screen Reveals the Diverse Structural Landscape of a G‐Quadruplex Library

Chemistry – A European Journal
2024-11-11 | Journal article
DOI: 10.1002/chem.202401437
Part of ISSN: 0947-6539
Part of ISSN: 1521-3765
Contributors: Ráchel Sgallová; Martin Volek; Jaroslav Kurfürst; Pavel Srb; Václav Veverka; Edward Curtis
Source: Self-asserted source
Vaclav Veverka

Apollon: a deoxyribozyme that generates a yellow product

Nucleic Acids Research
2024-08-27 | Journal article
DOI: 10.1093/nar/gkae490
Contributors: Martin Volek; Jaroslav Kurfürst; Milan Kožíšek; Pavel Srb; Václav Veverka; Edward A Curtis
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Crossref

Aurora: a fluorescent deoxyribozyme for high-throughput screening

Nucleic Acids Research
2024-08-27 | Journal article
DOI: 10.1093/nar/gkae467
Contributors: Martin Volek; Jaroslav Kurfürst; Matúš Drexler; Michal Svoboda; Pavel Srb; Václav Veverka; Edward A Curtis
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RETRACTED AND REPLACED: Genomic context-dependent histone H3K36 methylation by three Drosophila methyltransferases and implications for dedicated chromatin readers

Nucleic Acids Research
2024-07-22 | Journal article
DOI: 10.1093/nar/gkae449
Contributors: Muhunden Jayakrishnan; Magdalena Havlová; Václav Veverka; Catherine Regnard; Peter B Becker
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Crossref

Genomic context-dependent histone H3K36 methylation by threeDrosophilamethyltransferases and implications for dedicated chromatin readers

2024-02-06 | Preprint
DOI: 10.1101/2024.02.06.577191
Contributors: Muhunden Jayakrishnan; Magdalena Havlová; Václav Veverka; Catherine Regnard; Peter B. Becker
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Crossref

The Impact of Lens Epithelium-Derived Growth Factor p75 Dimerization on Its Tethering Function

Cells
2024-01-25 | Journal article
DOI: 10.3390/cells13030227
Contributors: Tine Brouns; Vanda Lux; Siska Van Belle; Frauke Christ; Václav Veverka; Zeger Debyser
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Multivalency of nucleosome recognition by LEDGF

2023-08-09 | Other
DOI: 10.1093/nar/gkad674
Contributors: Eliska Koutna; Vanda Lux; Jana Skerlova; Pavel Srb; Rozalie Hexnerova; Hana Šváchová; Petr Novak; Milan Fabry; Simon Poepsel; Vaclav Veverka et al.
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Crossref

The TFIIS N-terminal domain (TND): a transcription assembly module at the interface of order and disorder

Biochemical Society Transactions
2023-01-18 | Journal article
DOI: 10.1042/bst20220342
Part of ISSN: 0300-5127
Part of ISSN: 1470-8752
Contributors: Katerina Cermakova; Vaclav Veverka; H. Courtney Hodges
Source: Self-asserted source
Vaclav Veverka

Development and characterisation of a chronic hepatitis B murine model with a mutation in the START codon of an HBV polymerase.

Physiological research
2022-12-22 | Journal article
PMID: 36545874
Contributors: Vanekova L; Polidarova M; Charvat V; Vavrin Z; Veverka V; Birkus G; Brazdova A
Source: Self-asserted source
Vaclav Veverka

Model of abasic site DNA cross-link repair; from the architecture of NEIL3 DNA binding domains to the X-structure model

Nucleic Acids Research
2022-09-26 | Journal article
DOI: 10.1093/nar/gkac793
Part of ISSN: 0305-1048
Part of ISSN: 1362-4962
Contributors: Vaclav Veverka
Source: Self-asserted source
Vaclav Veverka

Multiparametric Flow Cytometry-Based Immunophenotyping of Mouse Liver Immune Cells

Methods and Protocols
2022-09-03 | Journal article
DOI: 10.3390/mps5050070
Contributors: Lenka Vanekova; Marketa Pimkova Polidarova; Vaclav Veverka; Gabriel Birkus; Andrea Brazdova
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Nanodiamonds as traps for fibroblast growth factors: Parameters influencing the interaction

Carbon
2022-08 | Journal article
DOI: 10.1016/j.carbon.2022.04.017
Part of ISSN: 0008-6223
Source: Self-asserted source
Vaclav Veverka

FOXO4 interacts with p53 TAD and CRD and inhibits its binding to DNA

Protein Science
2022-05 | Journal article
DOI: 10.1002/pro.4287
Part of ISSN: 0961-8368
Part of ISSN: 1469-896X
Source: Self-asserted source
Vaclav Veverka

A ubiquitous disordered protein interaction module orchestrates transcription elongation

Science
2021-11-26 | Journal article
DOI: 10.1126/science.abe2913
Part of ISSN: 0036-8075
Part of ISSN: 1095-9203
Source: Self-asserted source
Vaclav Veverka

Conformational dynamics in interleukin 17A and 17F functional complexes is a key determinant of receptor A affinity and specificity.

Cytokine
2021-03-09 | Journal article
DOI: 10.1016/j.cyto.2021.155476
PMID: 33706174
Source: Self-asserted source
Vaclav Veverka

N-Glycosylation can selectively block or foster different receptor-ligand binding modes.

Scientific reports
2021-03-04 | Journal article
DOI: 10.1038/s41598-021-84569-z
PMID: 33664400
PMC: PMC7933184
Source: Self-asserted source
Vaclav Veverka

Overlapping but distinct: a new model for G-quadruplex biochemical specificity

Nucleic Acids Research
2021-02-26 | Journal article
DOI: 10.1093/nar/gkab037
Contributors: Martin Volek; Sofia Kolesnikova; Katerina Svehlova; Pavel Srb; Ráchel Sgallová; Tereza Streckerová; Juan A Redondo; Václav Veverka; Edward A Curtis
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Crossref

Unlike its Paralog LEDGF/p75, HRP-2 Is Dispensable for MLL-R Leukemogenesis but Important for Leukemic Cell Survival

Cells
2021-01 | Journal article | Author
DOI: 10.3390/cells10010192
Contributors: Siska Van Belle; Sara El Ashkar; Kateřina Čermáková; Filip Matthijssens; Steven Goossens; Alessandro Canella; Courtney H. Hodges; Frauke Christ; Jan De Rijck; Pieter Van Vlierberghe et al.
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Multidisciplinary Digital Publishing Institute

Kinetic Target‐Guided Synthesis of Small‐Molecule G‐Quadruplex Stabilizers

ChemistryOpen
2020-12 | Journal article
DOI: 10.1002/open.202000261
Contributors: Alice Pomeislová; Lukáš Vrzal; Jaroslav Kozák; Juraj Dobiaš; Martin Hubálek; Hana Dvořáková; Paul E. Reyes‐Gutiérrez; Filip Teplý; Václav Veverka
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Crossref

Structural basis of RNA recognition by the SARS-CoV-2 nucleocapsid phosphoprotein

PLOS Pathogens
2020-12-02 | Journal article
DOI: 10.1371/journal.ppat.1009100
Contributors: Dhurvas Chandrasekaran Dinesh; Michael S. Diamond; Dominika Chalupska; Jan Silhan; Eliska Koutna; Radim Nencka; Vaclav Veverka; Evzen Boura
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Crossref

Molecular Mechanism of LEDGF/p75 Dimerization

Structure
2020-09 | Journal article
DOI: 10.1016/j.str.2020.08.012
Part of ISSN: 0969-2126
Source: Self-asserted source
Vaclav Veverka

The redox‐active site of thioredoxin is directly involved in apoptosis signal‐regulating kinase 1 binding that is modulated by oxidative stress

The FEBS Journal
2020-04 | Journal article
DOI: 10.1111/febs.15101
Contributors: Katarina Psenakova; Rozalie Hexnerova; Pavel Srb; Veronika Obsilova; Vaclav Veverka; Tomas Obsil
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Crossref

Structural basis of RNA recognition by the SARS-CoV-2 nucleocapsid phosphoprotein

2020-04-05 | Preprint
DOI: 10.1101/2020.04.02.022194
Contributors: Dhurvas Chandrasekaran Dinesh; Dominika Chalupska; Jan Silhan; Vaclav Veverka; Evzen Boura
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Crossref

N-glycosylation blocks and simultaneously fosters different receptor-ligand binding sites: the chameleonic CD44–hyaluronan interaction

2020-03-25 | Preprint
DOI: 10.1101/2020.03.23.004002
Contributors: Joni Vuorio; Jana Škerlová; Milan Fábry; Václav Veverka; Ilpo Vattulainen; Pavlína Řezáčová; Hector Martinez-Seara
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Crossref

Rhomboid intramembrane protease YqgP licenses bacterial membrane protein quality control as adaptor of FtsH AAA protease

The EMBO Journal
2020-01-13 | Journal article
DOI: 10.15252/embj.2019102935
Part of ISSN: 0261-4189
Part of ISSN: 1460-2075
Source: Self-asserted source
Vaclav Veverka

GTP-Dependent Formation of Multimeric G-Quadruplexes

ACS Chemical Biology
2019-09-20 | Journal article
DOI: 10.1021/acschembio.9b00428
Contributors: Sofia Kolesnikova; Pavel Srb; Lukáš Vrzal; Michael S. Lawrence; Václav Veverka; Edward A. Curtis
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Crossref

Forkhead Domains of FOXO Transcription Factors Differ in both Overall Conformation and Dynamics

Cells
2019-08-24 | Journal article
DOI: 10.3390/cells8090966
Contributors: Katarina Psenakova; Klara Kohoutova; Veronika Obsilova; Michael Ausserlechner; Vaclav Veverka; Tomas Obsil
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Crossref

Relapsed acute lymphoblastic leukemia-specific mutations in NT5C2 cluster into hotspots driving intersubunit stimulation

Leukemia
2018 | Journal article
DOI: 10.1038/s41375-018-0073-5
EID:

2-s2.0-85043682355
Contributors: Hnízda, A.; Fábry, M.; Moriyama, T.; Pachl, P.; Kugler, M.; Brinsa, V.; Ascher, D.B.; Carroll, W.L.; Novák, P.; Žaliová, M. et al.
Source: Self-asserted source
Vaclav Veverka via Scopus - Elsevier

Affinity switching of the LEDGF/p75 IBD interactome is governed by kinase-dependent phosphorylation.

Proceedings of the National Academy of Sciences of the United States of America
2018-07 | Journal article
DOI: 10.1073/pnas.1803909115
PMID: 29997176
Contributors: Sharma S; Čermáková K; De Rijck J; Demeulemeester J; Fábry M; El Ashkar S; Van Belle S; Lepšík M; Tesina P; Duchoslav V et al.
Source: Self-asserted source
Vaclav Veverka via Europe PubMed Central

Structural Stability of Peptidic His-Containing Proton Wire in Solution and in the Adsorbed State

Langmuir
2018-06-19 | Journal article
DOI: 10.1021/acs.langmuir.7b04139
Contributors: Vlastimil Dorčák; David Novák; Martin Kabeláč; Ondřej Kroutil; Lucie Bednárová; Václav Veverka; Jan Vacek
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Crossref

PI(4,5)P2 controls plasma membrane PI4P and PS levels via ORP5/8 recruitment to ER–PM contact sites

Journal of Cell Biology
2018-05-07 | Journal article
DOI: 10.1083/jcb.201710095
Contributors: Mira Sohn; Marek Korzeniowski; James P. Zewe; Rachel C. Wills; Gerald R.V. Hammond; Jana Humpolickova; Lukas Vrzal; Dominika Chalupska; Vaclav Veverka; Gregory D. Fairn et al.
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Crossref

Ranking Power of the SQM/COSMO Scoring Function on Carbonic Anhydrase II-Inhibitor Complexes.

Chemphyschem : a European journal of chemical physics and physical chemistry
2018-01 | Journal article
DOI: 10.1002/cphc.201701104
PMID: 29316128
Contributors: Pecina A; Brynda J; Vrzal L; Gnanasekaran R; Horejsi M; Eyrilmez S; Rezac J; Lepsik M; Rezacova P; Hobza P et al.
Source: Self-asserted source
Vaclav Veverka via Europe PubMed Central

Dominant-negative SMARCA4 mutants alter the accessibility landscape of tissue-unrestricted enhancers

Nature Structural & Molecular Biology
2018-01-11 | Journal article
DOI: 10.1038/s41594-017-0007-3
Contributors: H. Courtney Hodges; Benjamin Z. Stanton; Katerina Cermakova; Chiung-Ying Chang; Erik L. Miller; Jacob G. Kirkland; Wai Lim Ku; Vaclav Veverka; Keji Zhao; Gerald R. Crabtree
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Crossref

Characterization of Three Druggable Hot-Spots in the Aurora-A/TPX2 Interaction Using Biochemical, Biophysical, and Fragment-Based Approaches.

ACS chemical biology
2017-11 | Journal article
DOI: 10.1021/acschembio.7b00537
PMID: 29045126
Contributors: McIntyre PJ; Collins PM; Vrzal L; Birchall K; Arnold LH; Mpamhanga C; Coombs PJ; Burgess SG; Richards MW; Winter A et al.
Source: Self-asserted source
Vaclav Veverka via Europe PubMed Central

Structural characterization of CAS SH3 domain selectivity and regulation reveals new CAS interaction partners.

Scientific reports
2017-08 | Journal article
DOI: 10.1038/s41598-017-08303-4
PMID: 28808245
PMC: PMC5556061
Source: Self-asserted source
Vaclav Veverka via Europe PubMed Central

Structural basis of the interaction between the putative adhesion-involved and iron-regulated FrpD and FrpC proteins of Neisseria meningitidis.

Scientific reports
2017-01 | Journal article
DOI: 10.1038/srep40408
PMID: 28084396
PMC: PMC5233953
Source: Self-asserted source
Vaclav Veverka via Europe PubMed Central

Human DNA-Damage-Inducible 2 Protein Is Structurally and Functionally Distinct from Its Yeast Ortholog.

Scientific Reports
2016 | Journal article
DOI: 10.1038/srep30443
PMID: 27461074
PMC: PMC4962041
Source: Self-asserted source
Vaclav Veverka via Europe PubMed Central

Structural studies of the yeast DNA damage-inducible protein Ddi1 reveal domain architecture of this eukaryotic protein family.

Scientific reports
2016 | Journal article
DOI: 10.1038/srep33671
PMID: 27646017
PMC: PMC5028754
Source: Self-asserted source
Vaclav Veverka via Europe PubMed Central

Oligomeric interface modulation causes misregulation of purine 5´-nucleotidase in relapsed leukemia.

BMC biology
2016-10 | Journal article
DOI: 10.1186/s12915-016-0313-y
PMID: 27756303
PMC: PMC5070119
Source: Self-asserted source
Vaclav Veverka via Europe PubMed Central

Probing Receptor Specificity by Sampling the Conformational Space of the Insulin-like Growth Factor II C-domain.

The Journal of biological chemistry
2016-09 | Journal article
DOI: 10.1074/jbc.m116.741041
PMID: 27510031
PMC: PMC5076530
Source: Self-asserted source
Vaclav Veverka via Europe PubMed Central
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Antimicrobial Peptide from the Wild Bee Hylaeus signatus Venom and Its Analogues: Structure-Activity Study and Synergistic Effect with Antibiotics.

Journal of natural products
2016-04 | Journal article
DOI: 10.1021/acs.jnatprod.5b01129
PMID: 26998557
Source: Self-asserted source
Vaclav Veverka via Europe PubMed Central

Calcium-Driven Folding of RTX Domain β-Rolls Ratchets Translocation of RTX Proteins through Type I Secretion Ducts.

Molecular cell
2016-04 | Journal article
DOI: 10.1016/j.molcel.2016.03.018
PMID: 27058787
Source: Self-asserted source
Vaclav Veverka via Europe PubMed Central

Structural insights and in vitro reconstitution of membrane targeting and activation of human PI4KB by the ACBD3 protein.

Scientific reports
2016-03 | Journal article
DOI: 10.1038/srep23641
PMID: 27009356
PMC: PMC4806292
Source: Self-asserted source
Vaclav Veverka via Europe PubMed Central

Rational steering of insulin binding specificity by intra-chain chemical crosslinking.

Scientific reports
2016-01 | Journal article
DOI: 10.1038/srep19431
PMID: 26792393
PMC: PMC4726324
Source: Self-asserted source
Vaclav Veverka via Europe PubMed Central

Multiple cellular proteins interact with LEDGF/p75 through a conserved unstructured consensus motif.

Nature communications
2015 | Journal article
DOI: 10.1038/ncomms8968
PMID: 26245978
Source: Self-asserted source
Vaclav Veverka via Europe PubMed Central
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Peer review (2 reviews for 2 publications/grants)

Review activity for Journal of Molecular Biology. (1)
Review activity for Nucleic acids research. (1)
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