Personal information

Websites & social links

Mastodon
Group website

Keywords

microbiota, contaminants, Streptococcus pneumoniae, pathogen genomics, Ornithobacterium hominis

Countries

United Kingdom

Activities

Collapse all

Employment (3)

University of Cambridge: Cambridge, GB

2019-09-02 to present | Research Assistant (Department of Veterinary Medicine)
Employment
Source: Self-asserted source
Susannah J Salter

Wellcome Trust Sanger Institute: Cambridge, Cambridgeshire, GB

2007 to 2019
Employment
Source: Self-asserted source
Susannah J Salter

National Institute for Biological Standards and Control: Potters Bar, GB

2007 to 2007
Employment
Source: Self-asserted source
Susannah J Salter

Education and qualifications (2)

London School of Hygiene and Tropical Medicine: London, London, GB

2006 to 2008 | MSc Molecular Biology of Infectious Diseases
Education
Source: Self-asserted source
Susannah J Salter

Durham University: Durham, Durham, GB

2002 to 2005 | BA Anthropology & Archaeology
Education
Source: Self-asserted source
Susannah J Salter

Works (18)

Complete Genome Sequence of Ornithobacterium hominis Type Strain MSHR-COH1 (ATCC TSD-185)

Microbiology Resource Announcements
2023-07-18 | Journal article
DOI: 10.1128/mra.00379-23
Contributors: Susannah J. Salter; Robyn L. Marsh; Julian Parkhill; David A. Baltrus
Source: check_circle
Crossref

Pneumococcal within-host diversity during colonization, transmission and treatment

Nature Microbiology
2022-10-10 | Journal article
DOI: 10.1038/s41564-022-01238-1
Contributors: Gerry Tonkin-Hill; Clare Ling; Chrispin Chaguza; Susannah J. Salter; Pattaraporn Hinfonthong; Elissavet Nikolaou; Natalie Tate; Andrzej Pastusiak; Claudia Turner; Claire Chewapreecha et al.
Source: check_circle
Crossref

Pneumococcal within-host diversity during colonisation, transmission and treatment

2022-02-21 | Preprint
DOI: 10.1101/2022.02.20.480002
Contributors: Gerry Tonkin-Hill; Clare Ling; Chrispin Chaguza; Susannah J Salter; Pattaraporn Hinfonthong; Elissavet Nikolaou; Natalie Tate; Andrzej Pastusiak; Claudia Turner; Claire Chewapreecha et al.
Source: check_circle
Crossref

Method for culturing Candidatus Ornithobacterium hominis.

Journal of microbiological methods
2019-03-11 | Journal article
DOI: 10.1016/j.mimet.2019.03.006
PMID: 30871998
Source: Self-asserted source
Susannah J Salter

'Candidatus Ornithobacterium hominis': insights gained from draft genomes obtained from nasopharyngeal swabs.

Microbial genomics
2019-02-05 | Journal article
DOI: 10.1099/mgen.0.000247
PMID: 30720420
PMC: PMC6421346
Source: Self-asserted source
Susannah J Salter

Recognizing the reagent microbiome.

Nature microbiology
2018-08-01 | Journal article
DOI: 10.1038/s41564-018-0202-y
PMID: 30046175
Source: Self-asserted source
Susannah J Salter

A longitudinal study of the infant nasopharyngeal microbiota: The effects of age, illness and antibiotic use in a cohort of South East Asian children

PLOS Neglected Tropical Diseases
2017-10-02 | Journal article
DOI: 10.1371/journal.pntd.0005975
Contributors: Susannah J. Salter; Benjamin L Makepeace; Claudia Turner; Wanitda Watthanaworawit; Marcus C. de Goffau; Josef Wagner; Julian Parkhill; Stephen D. Bentley; David Goldblatt; Francois Nosten et al.
Source: check_circle
Crossref

Pneumococcal Capsule Synthesis Locus cps as Evolutionary Hotspot with Potential to Generate Novel Serotypes by Recombination.

Molecular biology and evolution
2017-10-01 | Journal article
DOI: 10.1093/molbev/msx173
PMID: 28595308
PMC: PMC5850285
Source: Self-asserted source
Susannah J Salter

Frequent recombination of pneumococcal capsule highlights future risks of emergence of novel serotypes

2017-01-04 | Preprint
DOI: 10.1101/098335
Contributors: Rafał J. Mostowy; Nicholas J. Croucher; Nicola De Maio; Claire Chewapreecha; Susannah J. Salter; Paul Turner; David M. Aanensen; Stephen D. Bentley; Xavier Didelot; Christophe Fraser
Source: check_circle
Crossref

Genetic Stabilization of the Drug-Resistant PMEN1 Pneumococcus Lineage by Its Distinctive DpnIII Restriction-Modification System.

2015-06 | Journal article
DOI: 10.1128/mbio.00173-15
PMID: 26081630
PMC: PMC4471560
Contributors: Eutsey RA; Powell E; Dordel J; Salter SJ; Clark TA; Korlach J; Ehrlich GD; Hiller NL
Source: Self-asserted source
Susannah J Salter via Europe PubMed Central

Reagent and laboratory contamination can critically impact sequence-based microbiome analyses.

2014 | Journal article
DOI:

10.1186/s12915-014-0087-z

PMID:

25387460
Contributors: Salter SJ; Cox MJ; Turek EM; Calus ST; Cookson WO; Moffatt MF; Turner P; Parkhill J; Loman NJ; Walker AW
Source: Self-asserted source
Susannah J Salter via Europe PubMed Central

Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages.

2014-12 | Journal article
PMID:

25480686
Contributors: Hilty M; Wüthrich D; Salter SJ; Engel H; Campbell S; Sá-Leão R; de Lencastre H; Hermans P; Sadowy E; Turner P et al.
Source: Self-asserted source
Susannah J Salter via Europe PubMed Central

Comprehensive identification of single nucleotide polymorphisms associated with beta-lactam resistance within pneumococcal mosaic genes.

2014-08 | Journal article
DOI:

10.1371/journal.pgen.1004547

PMID:

25101644

PMC:

PMC4125147
Contributors: Chewapreecha C; Marttinen P; Croucher NJ; Salter SJ; Harris SR; Mather AE; Hanage WP; Goldblatt D; Nosten FH; Turner C et al.
Source: Self-asserted source
Susannah J Salter via Europe PubMed Central

Dense genomic sampling identifies highways of pneumococcal recombination.

2014-03 | Journal article
DOI:

10.1038/ng.2895

PMID:

24509479

PMC:

PMC3970364
Contributors: Chewapreecha C; Harris SR; Croucher NJ; Turner C; Marttinen P; Cheng L; Pessia A; Aanensen DM; Mather AE; Page AJ et al.
Source: Self-asserted source
Susannah J Salter via Europe PubMed Central

Dominant role of nucleotide substitution in the diversification of serotype 3 pneumococci over decades and during a single infection.

2013 | Journal article
DOI:

10.1371/journal.pgen.1003868

PMID:

24130509

PMC:

PMC3794909
Contributors: Croucher NJ; Mitchell AM; Gould KA; Inverarity D; Barquist L; Feltwell T; Fookes MC; Harris SR; Dordel J; Salter SJ et al.
Source: Self-asserted source
Susannah J Salter via Europe PubMed Central

Patent human infections with the whipworm, Trichuris trichiura, are not associated with alterations in the faecal microbiota.

2013 | Journal article
DOI:

10.1371/journal.pone.0076573

PMID:

24124574

PMC:

PMC3790696
Contributors: Cooper P; Walker AW; Reyes J; Chico M; Salter SJ; Vaca M; Parkhill J
Source: Self-asserted source
Susannah J Salter via Europe PubMed Central

Community Archaeology and Human Osteology: The Sedgeford Experience

2012 | Book chapter
Source: Self-asserted source
Susannah J Salter

Variation at the capsule locus, cps, of mistyped and non-typable Streptococcus pneumoniae isolates.

2012-06 | Journal article
DOI:

10.1099/mic.0.056580-0

PMID:

22403189

PMC:

PMC3541774
Contributors: Salter SJ; Hinds J; Gould KA; Lambertsen L; Hanage WP; Antonio M; Turner P; Hermans PW; Bootsma HJ; O'Brien KL et al.
Source: Self-asserted source
Susannah J Salter via Europe PubMed Central
How many people are using ORCID?