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Scopus Author ID: 15061054500

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Johns Hopkins University: Baltimore, Maryland, US

2011-07-01 to present | Research Scientist (Electrical and Computer Engineering)
Employment
Source: Self-asserted source
Aaron Carass

Works (50 of 111)

Items per page:
Page 1 of 3

Beyond MR Image Harmonization: Resolution Matters Too

2025 | Book chapter
DOI: 10.1007/978-3-031-73281-2_4
Contributors: Savannah P. Hays; Samuel W. Remedios; Lianrui Zuo; Ellen M. Mowry; Scott D. Newsome; Peter A. Calabresi; Aaron Carass; Blake E. Dewey; Jerry L. Prince
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A survey on deep learning in medical image registration: New technologies, uncertainty, evaluation metrics, and beyond

Medical Image Analysis
2025-02 | Journal article
DOI: 10.1016/j.media.2024.103385
Contributors: Junyu Chen; Yihao Liu; Shuwen Wei; Zhangxing Bian; Shalini Subramanian; Aaron Carass; Jerry L. Prince; Yong Du
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Crossref

Image harmonization improves consistency of intra-rater delineations of MS lesions in heterogeneous MRI

Neuroimage: Reports
2024-03 | Journal article
DOI: 10.1016/j.ynirp.2024.100195
Contributors: Aaron Carass; Danielle Greenman; Blake E. Dewey; Peter A. Calabresi; Jerry L. Prince; Dzung L. Pham
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Crossref

MomentaMorph: Unsupervised Spatial-Temporal Registration with Momenta, Shooting, and Correction

2023 | Book chapter
DOI: 10.1007/978-3-031-47425-5_3
Contributors: Zhangxing Bian; Shuwen Wei; Yihao Liu; Junyu Chen; Jiachen Zhuo; Fangxu Xing; Jonghye Woo; Aaron Carass; Jerry L. Prince
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Crossref

Recurrent Self Fusion: Iterative Denoising for Consistent Retinal OCT Segmentation

2023 | Book chapter
DOI: 10.1007/978-3-031-44013-7_5
Contributors: Shuwen Wei; Yihao Liu; Zhangxing Bian; Yuli Wang; Lianrui Zuo; Peter A. Calabresi; Shiv Saidha; Jerry L. Prince; Aaron Carass
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Crossref

A reproducibility evaluation of the effects of MRI defacing on brain segmentation

2023-05-21 | Preprint
DOI: 10.1101/2023.05.15.23289995
Contributors: Chenyu Gao; Bennett A. Landman; Jerry L. Prince; Aaron Carass
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Crossref

Disentangled Representation Learning for OCTA Vessel Segmentation With Limited Training Data

IEEE Transactions on Medical Imaging
2022-12 | Journal article
DOI: 10.1109/TMI.2022.3193029
Contributors: Yihao Liu; Aaron Carass; Lianrui Zuo; Yufan He; Shuo Han; Lorenzo Gregori; Sean Murray; Rohit Mishra; Jianqin Lei; Peter A. Calabresi et al.
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Information-Based Disentangled Representation Learning for Unsupervised MR Harmonization

2021 | Book chapter
DOI: 10.1007/978-3-030-78191-0_27
Contributors: Lianrui Zuo; Blake E. Dewey; Aaron Carass; Yihao Liu; Yufan He; Peter A. Calabresi; Jerry L. Prince
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Crossref

Integrating material properties from magnetic resonance elastography into subject-specific computational models for the human brain

Brain Multiphysics
2021 | Journal article
DOI: 10.1016/j.brain.2021.100038
Contributors: Ahmed Alshareef; Andrew K. Knutsen; Curtis L. Johnson; Aaron Carass; Kshitiz Upadhyay; Philip V. Bayly; Dzung L. Pham; Jerry L. Prince; K.T. Ramesh
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Crossref

MR Slice Profile Estimation by Learning to Match Internal Patch Distributions

2021 | Book chapter
DOI: 10.1007/978-3-030-78191-0_9
Contributors: Shuo Han; Samuel Remedios; Aaron Carass; Michael Schär; Jerry L. Prince
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Crossref

Unsupervised MR-to-CT Synthesis Using Structure-Constrained CycleGAN

IEEE Transactions on Medical Imaging
2020-12 | Journal article
DOI: 10.1109/TMI.2020.3015379
Contributors: Heran Yang; Jian Sun; Aaron Carass; Can Zhao; Junghoon Lee; Jerry L. Prince; Zongben Xu
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Crossref

Longitudinal analysis of regional cerebellum volumes during normal aging

NeuroImage
2020-10 | Journal article
DOI: 10.1016/j.neuroimage.2020.117062
Contributors: Shuo Han; Yang An; Aaron Carass; Jerry L. Prince; Susan M. Resnick
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Crossref

Evaluating White Matter Lesion Segmentations with Refined Sørensen-Dice Analysis

Scientific Reports
2020-05-19 | Journal article
DOI: 10.1038/s41598-020-64803-w
Contributors: Aaron Carass; Snehashis Roy; Adrian Gherman; Jacob C. Reinhold; Andrew Jesson; Tal Arbel; Oskar Maier; Heinz Handels; Mohsen Ghafoorian; Bram Platel et al.
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Crossref

Applications of a deep learning method for anti-aliasing and super-resolution in MRI

Magnetic Resonance Imaging
2019-12 | Journal article
DOI: 10.1016/j.mri.2019.05.038
Contributors: Can Zhao; Muhan Shao; Aaron Carass; Hao Li; Blake E. Dewey; Lotta M. Ellingsen; Jonghye Woo; Michael A. Guttman; Ari M. Blitz; Maureen Stone et al.
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Crossref

DeepHarmony: A deep learning approach to contrast harmonization across scanner changes

Magnetic Resonance Imaging
2019-12 | Journal article
DOI: 10.1016/j.mri.2019.05.041
Contributors: Blake E. Dewey; Can Zhao; Jacob C. Reinhold; Aaron Carass; Kathryn C. Fitzgerald; Elias S. Sotirchos; Shiv Saidha; Jiwon Oh; Dzung L. Pham; Peter A. Calabresi et al.
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Crossref

Brain ventricle parcellation using a deep neural network: Application to patients with ventriculomegaly

NeuroImage: Clinical
2019-05 | Journal article
DOI: 10.1016/j.nicl.2019.101871
Contributors: Muhan Shao; Shuo Han; Aaron Carass; Xiang Li; Ari M. Blitz; Jaehoon Shin; Jerry L. Prince; Lotta M. Ellingsen
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Crossref

Retinal layer parcellation of optical coherence tomography images: Data resource for multiple sclerosis and healthy controls

Data in Brief
2019-02 | Journal article
DOI: 10.1016/j.dib.2018.12.073
Contributors: Yufan He; Aaron Carass; Sharon D. Solomon; Shiv Saidha; Peter A. Calabresi; Jerry L. Prince
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Crossref

Author Correction: Why rankings of biomedical image analysis competitions should be interpreted with care

Nature Communications
2019-01-30 | Journal article
DOI: 10.1038/s41467-019-08563-w
Contributors: Lena Maier-Hein; Matthias Eisenmann; Annika Reinke; Sinan Onogur; Marko Stankovic; Patrick Scholz; Tal Arbel; Hrvoje Bogunovic; Andrew P. Bradley; Aaron Carass et al.
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Crossref

Automatic Coronary Wall and Atherosclerotic Plaque Segmentation from 3D Coronary CT Angiography

Scientific Reports
2019-01-10 | Journal article
DOI: 10.1038/s41598-018-37168-4
Contributors: Ahmed M. Ghanem; Ahmed H. Hamimi; Jatin R. Matta; Aaron Carass; Reham M. Elgarf; Ahmed M. Gharib; Khaled Z. Abd-Elmoniem
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Crossref

Why rankings of biomedical image analysis competitions should be interpreted with care

Nature Communications
2018-12-06 | Journal article
DOI: 10.1038/s41467-018-07619-7
Contributors: Lena Maier-Hein; Matthias Eisenmann; Annika Reinke; Sinan Onogur; Marko Stankovic; Patrick Scholz; Tal Arbel; Hrvoje Bogunovic; Andrew P. Bradley; Aaron Carass et al.
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Crossref

Preoperative Mapping of the Supplementary Motor Area in Patients with Brain Tumor Using Resting-State fMRI with Seed-Based Analysis

American Journal of Neuroradiology
2018-07-12 | Journal article
DOI: 10.3174/ajnr.A5709
Contributors: J. Wongsripuemtet; A.E. Tyan; A. Carass; S. Agarwal; S.K. Gujar; J.J. Pillai; H.I. Sair
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Crossref

Longitudinal multiple sclerosis lesion segmentation: Resource and challenge

NeuroImage
2017 | Journal article
DOI: 10.1016/j.neuroimage.2016.12.064
EID:

2-s2.0-85009736721
Contributors: Carass, A.; Roy, S.; Jog, A.; Cuzzocreo, J.L.; Magrath, E.; Gherman, A.; Button, J.; Nguyen, J.; Prados, F.; Sudre, C.H. et al.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Random forest regression for magnetic resonance image synthesis

Medical Image Analysis
2017 | Journal article
DOI: 10.1016/j.media.2016.08.009
EID:

2-s2.0-84984870830
Contributors: Jog, A.; Carass, A.; Roy, S.; Pham, D.L.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Cross contrast multi-channel image registration using image synthesis for MR brain images

Medical Image Analysis
2017-02 | Journal article
DOI: 10.1016/j.media.2016.10.005
Contributors: Min Chen; Aaron Carass; Amod Jog; Junghoon Lee; Snehashis Roy; Jerry L. Prince
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Crossref

A toolbox to visually explore cerebellar shape changes in cerebellar disease and dysfunction

Progress in Biomedical Optics and Imaging - Proceedings of SPIE
2016 | Conference paper
DOI: 10.1117/12.2216584
EID:

2-s2.0-84988867546
Contributors: Abulnaga, S.M.; Yang, Z.; Carass, A.; Kansal, K.; Jedynak, B.M.; Onyike, C.U.; Ying, S.H.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Automated cerebellar lobule segmentation with application to cerebellar structural analysis in cerebellar disease

NeuroImage
2016 | Journal article
DOI: 10.1016/j.neuroimage.2015.09.032
EID:

2-s2.0-84960799345
Contributors: Yang, Z.; Ye, C.; Bogovic, J.A.; Carass, A.; Jedynak, B.M.; Ying, S.H.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Combined registration and motion correction of longitudinal retinal OCT data

Progress in Biomedical Optics and Imaging - Proceedings of SPIE
2016 | Conference paper
DOI: 10.1117/12.2217157
EID:

2-s2.0-84981744772
Contributors: Lang, A.; Carass, A.; Al-Louzi, O.; Bhargava, P.; Solomon, S.D.; Calabresi, P.A.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Combining multi-atlas segmentation with brain surface estimation

Progress in Biomedical Optics and Imaging - Proceedings of SPIE
2016 | Conference paper
DOI: 10.1117/12.2216604
EID:

2-s2.0-84981731297
Contributors: Huo, Y.; Carass, A.; Resnick, S.M.; Pham, D.L.; Prince, J.L.; Landman, B.A.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Effects of spatial resolution on image registration

Progress in Biomedical Optics and Imaging - Proceedings of SPIE
2016 | Conference paper
DOI: 10.1117/12.2217322
EID:

2-s2.0-84981744796
Contributors: Zhao, C.; Carass, A.; Jog, A.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Intensity inhomogeneity correction of macular OCT using N3 and retinal flatspace

Proceedings - International Symposium on Biomedical Imaging
2016 | Conference paper
DOI: 10.1109/ISBI.2016.7493243
EID:

2-s2.0-84978402427
Contributors: Lang, A.; Carass, A.; Jedynak, B.M.; Solomon, S.D.; Calabresi, P.A.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Landmark based shape analysis for cerebellar ataxia classification and cerebellar atrophy pattern visualization

Progress in Biomedical Optics and Imaging - Proceedings of SPIE
2016 | Conference paper
DOI: 10.1117/12.2217313
EID:

2-s2.0-84981725420
Contributors: Yang, Z.; Abulnaga, S.M.; Carass, A.; Kansal, K.; Jedynak, B.M.; Onyike, C.; Ying, S.H.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Quality assurance using outlier detection on an automatic segmentation method for the cerebellar peduncles

Progress in Biomedical Optics and Imaging - Proceedings of SPIE
2016 | Conference paper
DOI: 10.1117/12.2217309
EID:

2-s2.0-84981719389
Contributors: Li, K.; Ye, C.; Yang, Z.; Carass, A.; Ying, S.H.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Segmentation and labeling of the ventricular system in normal pressure hydrocephalus using patch-based tissue classification and multi-atlas labeling

Progress in Biomedical Optics and Imaging - Proceedings of SPIE
2016 | Conference paper
DOI: 10.1117/12.2216511
EID:

2-s2.0-84981717916
Contributors: Ellingsen, L.M.; Roy, S.; Carass, A.; Blitz, A.M.; Pham, D.L.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Segmentation of thalamus from MR images via task-driven dictionary learning

Progress in Biomedical Optics and Imaging - Proceedings of SPIE
2016 | Conference paper
DOI: 10.1117/12.2214206
EID:

2-s2.0-84981737263
Contributors: Liu, L.; Glaister, J.; Sun, X.; Carass, A.; Tran, T.D.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Self super-resolution for magnetic resonance images

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2016 | Book
DOI: 10.1007/978-3-319-46726-9_64
EID:

2-s2.0-84996524106
Contributors: Jog, A.; Carass, A.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Simultaneous segmentation of retinal surfaces and microcystic macular edema in SDOCT volumes

Progress in Biomedical Optics and Imaging - Proceedings of SPIE
2016 | Conference paper
DOI: 10.1117/12.2214676
EID:

2-s2.0-84981743033
Contributors: Antony, B.J.; Lang, A.; Swingle, E.K.; Al-Louzi, O.; Carass, A.; Solomon, S.; Calabresi, P.A.; Saidha, S.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Thalamus parcellation using multi-modal feature classification and thalamic nuclei priors

Progress in Biomedical Optics and Imaging - Proceedings of SPIE
2016 | Conference paper
DOI: 10.1117/12.2216987
EID:

2-s2.0-84981738875
Contributors: Glaister, J.; Carass, A.; Stough, J.V.; Calabresi, P.A.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Voxel based morphometry in optical coherence tomography: Validation & core findings

Progress in Biomedical Optics and Imaging - Proceedings of SPIE
2016 | Conference paper
DOI: 10.1117/12.2216096
EID:

2-s2.0-84978891234
Contributors: Antony, B.J.; Chen, M.; Carass, A.; Jedynak, B.M.; Al-Louzi, O.; Solomon, S.D.; Saidha, S.; Calabresi, P.A.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Consistent cortical reconstruction and multi-atlas brain segmentation

NeuroImage
2016-09 | Journal article
DOI: 10.1016/j.neuroimage.2016.05.030
Contributors: Yuankai Huo; Andrew J. Plassard; Aaron Carass; Susan M. Resnick; Dzung L. Pham; Jerry L. Prince; Bennett A. Landman
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Crossref

Temporal filtering of longitudinal brain magnetic resonance images for consistent segmentation

NeuroImage: Clinical
2016-02 | Journal article
DOI: 10.1016/j.nicl.2016.02.005
Contributors: Snehashis Roy; Aaron Carass; Jennifer Pacheco; Murat Bilgel; Susan M. Resnick; Jerry L. Prince; Dzung L. Pham
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Crossref

Automatic segmentation of microcystic macular edema in OCT

Biomedical Optics Express
2015 | Journal article
EID:

2-s2.0-84920514409
Contributors: Lang, A.; Carass, A.; Swingle, E.K.; Al-Louzi, O.; Bhargava, P.; Saidha, S.; Ying, H.S.; Calabresi, P.A.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Automatic segmentation of microcystic macular edema in OCT

Biomedical Optics Express
2015 | Journal article
EID:

2-s2.0-84942374368
Contributors: Lang, A.; Carass, A.; Swingle, E.K.; Al-Louzi, O.; Bhargava, P.; Saidha, S.; Ying, H.S.; Calabresi, P.A.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Deformation field correction for spatial normalization of PET images

NeuroImage
2015 | Journal article
DOI: 10.1016/j.neuroimage.2015.06.063
EID:

2-s2.0-84937208919
Contributors: Bilgel, M.; Carass, A.; Resnick, S.M.; Wong, D.F.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Longitudinal graph-based segmentation of macular OCT using fundus alignment

Progress in Biomedical Optics and Imaging - Proceedings of SPIE
2015 | Conference paper
DOI: 10.1117/12.2077713
EID:

2-s2.0-84943411835
Contributors: Lang, A.; Carass, A.; Al-Louzi, O.; Bhargava, P.; Ying, H.S.; Calabresi, P.A.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Longitudinal patch-based segmentation of multiple sclerosis white matter lesions

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2015 | Book
DOI: 10.1007/978-3-319-24888-2_24
EID:

2-s2.0-84952059686
Contributors: Roy, S.; Carass, A.; Prince, J.L.; Pham, D.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

MR image synthesis by contrast learning on neighborhood ensembles

Medical Image Analysis
2015 | Journal article
DOI: 10.1016/j.media.2015.05.002
EID:

2-s2.0-84930958495
Contributors: Jog, A.; Carass, A.; Roy, S.; Pham, D.L.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

MRBrainS Challenge: Online Evaluation Framework for Brain Image Segmentation in 3T MRI Scans

Computational Intelligence and Neuroscience
2015 | Journal article
DOI: 10.1155/2015/813696
EID:

2-s2.0-84950116370
Contributors: Mendrik, A.M.; Vincken, K.L.; Kuijf, H.J.; Breeuwer, M.; Bouvy, W.H.; De Bresser, J.; Alansary, A.; De Bruijne, M.; Carass, A.; El-Baz, A. et al.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Multi-output decision trees for lesion segmentation in multiple sclerosis

Progress in Biomedical Optics and Imaging - Proceedings of SPIE
2015 | Conference paper
DOI: 10.1117/12.2082157
EID:

2-s2.0-84943410070
Contributors: Jog, A.; Carass, A.; Pham, D.L.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Multiple-object geometric deformable model for segmentation of macular OCT: Errata

Biomedical Optics Express
2015 | Journal article
DOI: 10.1364/BOE.6.001351
EID:

2-s2.0-84948765757
Contributors: Carass, A.; Lang, A.; Hauser, M.; Calabresi, P.A.; Ying, H.S.; Prince, J.L.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier

Segmentation of microcystic macular edema in Cirrus OCT scans with an exploratory longitudinal study

Progress in Biomedical Optics and Imaging - Proceedings of SPIE
2015 | Conference paper
DOI: 10.1117/12.2082164
EID:

2-s2.0-84943405106
Contributors: Swingle, E.K.; Lang, A.; Carass, A.; Al-Louzi, O.; Saidha, S.; Prince, J.L.; Calabresi, P.A.
Source: Self-asserted source
Aaron Carass via Scopus - Elsevier
Items per page:
Page 1 of 3

Peer review (9 reviews for 4 publications/grants)

Review activity for Computers in biology and medicine. (1)
Review activity for European radiology. (1)
Review activity for Medical image analysis. (5)
Review activity for NeuroImage. (2)
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