Personal information

Other IDs

Loop profile: 775709

Keywords

Molecular Modeling, Molecular Dynamics, Enhanced Sampling Methods, Free Energy Calculations, Coarse-grained Models, Structure-based Drug Design, Molecular Docking, Homology Modeling, Virtual Ligand Screening, GPCR, Evolution, Protein-Ligand Interactions, Protein-Protein Interactions, Membrane Proteins

Countries

United States

Activities

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Employment (2)

University of Idaho: Moscow, ID, US

2019-01 to present | Research Assistant Professor (Department of Biological Sciences)
Employment
Source: Self-asserted source
Jagdish Suresh Patel

University of Idaho: Moscow, Idaho, US

2015-10 to 2018-12 | Postdoctoral Associates (Center for Modeling Complex Interactions)
Employment
Source: Self-asserted source
Jagdish Suresh Patel

Education and qualifications (2)

Italian Institute of Technology: Genoa, IT

2009-01 to 2012-04 | Ph.D. Computational Chemistry
Education
Source: Self-asserted source
Jagdish Suresh Patel

University College London School of Pharmacy: London, GB

2007-09 to 2008-10 | MSc Drug Discovery
Education
Source: Self-asserted source
Jagdish Suresh Patel

Works (14)

Human Milk Protein-Derived Bioactive Peptides from In Vitro-Digested Colostrum Exert Antimicrobial Activities against Common Neonatal Pathogens

Nutrients
2024-06 | Journal article | Author
DOI: 10.3390/nu16132040
Contributors: Yang Lyu; Bum Jin Kim; Jagdish Suresh Patel; David Dallas; Yimin Chen
Source: check_circle
Multidisciplinary Digital Publishing Institute

The Characterization of a Novel Virus Discovered in the Yeast <i>Pichia membranifaciens</i>

Viruses
2022-03 | Journal article | Author
DOI: 10.3390/v14030594
Contributors: Mark Lee; Jack W. Creagh; Lance Fredericks; Angela M Crabtree; Jagdish Suresh Patel; Paul A. Rowley
Source: check_circle
Multidisciplinary Digital Publishing Institute

Electrostatic Switching Controls Channel Dynamics of the Sensor Protein VirB10 in A. tumefaciens Type IV Secretion System

ACS Omega
2020-02-04 | Journal article
DOI: 10.1021/acsomega.9b03313
ISSN: 2470-1343
Part of ISSN: 2470-1343
Source: Self-asserted source
Jagdish Suresh Patel

Dynamic Virtual Proteins: Visualization, Interaction and Collaboration in Virtual Reality

25th ACM Symposium on Virtual Reality Software and Technology
2019-11-12 | Conference paper
DOI: 10.1145/3359996.3365050
ISBN: 9781450370011
Source: Self-asserted source
Jagdish Suresh Patel

Vision using multiple distinct rod opsins in deep-sea fishes

Science
2019-05-10 | Journal article
DOI: 10.1126/science.aav4632
Part of ISSN: 0036-8075
Part of ISSN: 1095-9203
Source: Self-asserted source
Jagdish Suresh Patel

Calculation of Protein-Protein Binding Free Energies using Umbrella Sampling with Dual Resolution Water Models

Biophysical Journal
2019-02 | Journal article
DOI: 10.1016/j.bpj.2018.11.1571
Part of ISSN: 0006-3495
Source: Self-asserted source
Jagdish Suresh Patel

Predicting Spectral Shift in the Teleost Rh2 Cone Opsins using Molecular Dynamics Simulations

Biophysical Journal
2018-02 | Journal article
DOI: 10.1016/j.bpj.2017.11.1888
Part of ISSN: 0006-3495
Contributors: Jagdish Suresh Patel; Celeste J. Brown; F. Marty Ytreberg; Deborah L. Stenkamp
Source: Self-asserted source
Jagdish Suresh Patel via Crossref Metadata Search

Fast Calculation of Protein–Protein Binding Free Energies Using Umbrella Sampling with a Coarse-Grained Model

Journal of Chemical Theory and Computation
2018-01 | Journal article
DOI: 10.1021/acs.jctc.7b00660
Part of ISSN: 1549-9618
Contributors: Jagdish Suresh Patel; F. Marty Ytreberg
Source: Self-asserted source
Jagdish Suresh Patel via Crossref Metadata Search

Predicting peak spectral sensitivities of vertebrate cone visual pigments using atomistic molecular simulations

PLOS Computational Biology
2018-01 | Journal article
DOI: 10.1371/journal.pcbi.1005974
Part of ISSN: 1553-7358
Contributors: Jagdish Suresh Patel; Celeste J. Brown; F. Marty Ytreberg; Deborah L. Stenkamp; Alexander MacKerell
Source: Self-asserted source
Jagdish Suresh Patel via Crossref Metadata Search

Adaptive Mutations in RNA Polymerase and the Transcriptional Terminator Rho Have Similar Effects on Escherichia coli Gene Expression

Molecular Biology and Evolution
2017-08-09 | Journal article
DOI: 10.1093/molbev/msx216
Part of ISSN: 0737-4038
Contributors: Andrea González-González; Shaun M. Hug; Alejandra Rodríguez-Verdugo; Jagdish Suresh Patel; Brandon S. Gaut
Source: Self-asserted source
Jagdish Suresh Patel via Crossref Metadata Search

Fast Calculation of Protein-Protein Binding Free Energies using Umbrella Sampling with a Coarse-Grained Model

Biophysical Journal
2017-02 | Journal article
DOI: 10.1016/j.bpj.2016.11.1087
Part of ISSN: 0006-3495
Contributors: Jagdish Suresh Patel; F. Marty Ytreberg
Source: Self-asserted source
Jagdish Suresh Patel via Crossref Metadata Search

Steered Molecular Dynamics Simulations for Studying Protein–Ligand Interaction in Cyclin-Dependent Kinase 5

Journal of Chemical Information and Modeling
2014-01 | Journal article
DOI: 10.1021/ci4003574
Part of ISSN: 1549-9596
Contributors: Jagdish Suresh Patel; Anna Berteotti; Simone Ronsisvalle; Walter Rocchia; Andrea Cavalli
Source: Self-asserted source
Jagdish Suresh Patel via Crossref Metadata Search

Insights into Ligand–Protein Binding from Local Mechanical Response

Journal of Chemical Theory and Computation
2011-10-11 | Journal article
DOI: 10.1021/ct200324j
Part of ISSN: 1549-9618
Contributors: Jagdish Suresh Patel; Davide Branduardi; Matteo Masetti; Walter Rocchia; Andrea Cavalli
Source: Self-asserted source
Jagdish Suresh Patel via Crossref Metadata Search

Molecular Modeling on Inhibitor Complexes and Active-Site Dynamics of Cytochrome P450 C17, a Target for Prostate Cancer Therapy

Journal of Molecular Biology
2010-07 | Journal article
DOI: 10.1016/j.jmb.2010.05.069
Part of ISSN: 0022-2836
Contributors: Shozeb M. Haider; Jagdish S. Patel; Chetan S. Poojari; Stephen Neidle
Source: Self-asserted source
Jagdish Suresh Patel via Crossref Metadata Search

Peer review (5 reviews for 3 publications/grants)

Review activity for In silico pharmacology. (2)
Review activity for Journal of chemical theory and computation : (2)
Review activity for Journal of computer-aided molecular design. (1)
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