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Employment (2)

Johns Hopkins Bloomberg School of Public Health: Baltimore, MD, US

2022-09 to present | Assistant Professor (Epidemiology)
Employment
Source: Self-asserted source
Saki Takahashi

University of California, San Francisco: San Francisco, CA, US

2018-11 to 2022-09 | Postdoctoral Scholar (Medicine)
Employment
Source: Self-asserted source
Saki Takahashi

Education and qualifications (3)

Princeton University: Princeton, NJ, US

2019-01 | PhD (Ecology & Evolutionary Biology)
Education
Source: Self-asserted source
Saki Takahashi

Johns Hopkins University: Baltimore, MD, US

2013 | ScM (Epidemiology)
Education
Source: Self-asserted source
Saki Takahashi

Harvard College: Cambridge, MA, US

2011-05 | AB (Applied Mathematics)
Education
Source: Self-asserted source
Saki Takahashi

Professional activities (1)

Schmidt Science Fellows, in partnership with the Rhodes Trust: Oxford, GB

2019 | Schmidt Science Fellow
Distinction
Source: Self-asserted source
Saki Takahashi

Works (39)

Increasing intensity of enterovirus outbreaks projected with climate change

Nature Communications
2024-07-31 | Journal article
DOI: 10.1038/s41467-024-50936-3
Contributors: Rachel E. Baker; Wenchang Yang; Gabriel A. Vecchi; Saki Takahashi
Source: check_circle
Crossref

Challenges and approaches to establishing multi-pathogen serosurveillance: Findings from the 2023 Serosurveillance Summit

2024-07-11 | Preprint
DOI: 10.31219/osf.io/av7j2
Contributors: Andrea C. Carcelen; Alex C. Kong; Saki Takahashi; Sonia Hegde; Thomas Jaenisch; May C Chu; Rosemary Rochford; Natalya Kostandova; Emily Gurley; Amy Wesolowski et al.
Source: check_circle
Crossref

Serodynamics: a review of methods for epidemiological inference using serological data

2023-11-21 | Preprint
DOI: 10.31219/osf.io/kqdsn
Contributors: James Hay; Isobel Routledge; Saki Takahashi
Source: check_circle
Crossref

High rates of SARS-CoV-2 infection in pregnant Ugandan women and association with stunting in infancy

2023-06-20 | Preprint
DOI: 10.1101/2023.06.16.23291450
Contributors: Karen B. Jacobson; Katharina Röltgen; Brandon Lam; Patience Nayebare; Abel Kakuru; Jimmy Kizza; Miriam Aguti; Felistas Nankya; Jessica Briggs; Saki Takahashi et al.
Source: check_circle
Crossref

Metagenomic next-generation sequencing to characterize potential etiologies of non-malarial fever in a cohort living in a high malaria burden area of Uganda

PLOS Global Public Health
2023-05-03 | Journal article
DOI: 10.1371/journal.pgph.0001675
Contributors: Lusajo Mwakibete; Julia Robinson; Saki Takahashi; Vida Ahyong; Allison Black; John Rek; Isaac Ssewanyana; Moses Kamya; Grant Dorsey; Prasanna Jagannathan et al.
Source: check_circle
Crossref

serosim: an R package for simulating serological survey data arising from vaccination, epidemiological and antibody kinetics processes

2023-01-28 | Preprint
DOI: 10.1101/2023.01.24.23284958
Contributors: Arthur Menezes; Saki Takahashi; Isobel Routledge; C. Jessica E. Metcalf; Andrea L. Graham; James A. Hay
Source: check_circle
Crossref

Low Prevalence of Interferon α Autoantibodies in People Experiencing Symptoms of Post–Coronavirus Disease 2019 (COVID-19) Conditions, or Long COVID

The Journal of Infectious Diseases
2023-01-11 | Journal article
DOI: 10.1093/infdis/jiac372
Contributors: Michael J Peluso; Anthea Mitchell; Chung Yu Wang; Saki Takahashi; Rebecca Hoh; Viva Tai; Matthew S Durstenfeld; Priscilla Y Hsue; J Daniel Kelly; Jeffrey N Martin et al.
Source: check_circle
Crossref

Metagenomic next-generation sequencing to characterize etiologies of non-malarial fever in a cohort living in a high malaria burden area of Uganda

2022-09-04 | Preprint
DOI: 10.1101/2022.09.02.22279519
Contributors: Lusajo Mwakibete; Saki Takahashi; Vida Ahyong; Allison Black; John Rek; Isaac Ssewanyana; Moses Kamya; Grant Dorsey; Prasanna Jagannathan; Isabel Rodríguez-Barraquer et al.
Source: check_circle
Crossref

Proteome-wide antigenic profiling in Ugandan cohorts identifies associations between age, exposure intensity, and responses to repeat-containing antigens in Plasmodium falciparum

2022-06-26 | Preprint
DOI: 10.1101/2022.06.24.497532
Contributors: Madhura Raghavan; Katrina L. Kalantar; Elias Duarte; Noam Teyssier; Saki Takahashi; Andrew F. Kung; Jayant V Rajan; John Rek; Kevin K.A. Tetteh; Chris Drakeley et al.
Source: check_circle
Crossref

Assessing the role of multiple mechanisms increasing the age of dengue cases in Thailand

Proceedings of the National Academy of Sciences
2022-05-17 | Journal article
DOI: 10.1073/pnas.2115790119
Contributors: Angkana T. Huang; Saki Takahashi; Henrik Salje; Lin Wang; Bernardo Garcia-Carreras; Kathryn Anderson; Timothy Endy; Stephen Thomas; Alan L. Rothman; Chonticha Klungthong et al.
Source: check_circle
Crossref

Using sero-epidemiology to monitor disparities in vaccination and infection with SARS-CoV-2

Nature Communications
2022-05-04 | Journal article
DOI: 10.1038/s41467-022-30051-x
Contributors: Isobel Routledge; Saki Takahashi; Adrienne Epstein; Jill Hakim; Owen Janson; Keirstinne Turcios; Jo Vinden; John Tomas Risos; Margaret Rose Baniqued; Lori Pham et al.
Source: check_circle
Crossref

Citywide serosurveillance of the initial SARS-CoV-2 outbreak in San Francisco using electronic health records

Nature Communications
2021-12 | Journal article
DOI: 10.1038/s41467-021-23651-6
Source: Self-asserted source
Saki Takahashi

Using sero-epidemiology to monitor disparities in vaccination and infection with SARS-CoV-2

2021-10-07 | Other
DOI: 10.1101/2021.10.06.21264573
Contributors: Isobel Routledge; Saki Takahashi; Adrienne Epstein; Jill Hakim; Owen Janson; Keirstinne Turcios; Jo Vinden; John Tomas Risos; Margaret Rose Baniqued; Lori Pham et al.
Source: check_circle
Crossref

SARS-CoV-2 serology across scales: a framework for unbiased seroprevalence estimation incorporating antibody kinetics and epidemic recency

2021-09-14 | Other
DOI: 10.1101/2021.09.09.21263139
Contributors: Saki Takahashi; Michael J. Peluso; Jill Hakim; Keirstinne Turcios; Owen Janson; Isobel Routledge; Michael P. Busch; Rebecca Hoh; Viva Tai; J. Daniel Kelly et al.
Source: check_circle
Crossref

SARS-CoV-2 antibody magnitude and detectability are driven by disease severity, timing, and assay

Science Advances
2021-07-30 | Journal article
DOI: 10.1126/sciadv.abh3409
Contributors: Michael J. Peluso; Saki Takahashi; Jill Hakim; J. Daniel Kelly; Leonel Torres; Nikita S. Iyer; Keirstinne Turcios; Owen Janson; Sadie E. Munter; Cassandra Thanh et al.
Source: check_circle
Crossref

SARS-CoV-2 antibody magnitude and detectability are driven by disease severity, timing, and assay

medRxiv
2021-03-05 | Preprint
DOI: 10.1101/2021.03.03.21251639
Source: Self-asserted source
Saki Takahashi

Long-Term SARS-CoV-2-Specific Immune and Inflammatory Responses Across a Clinically Diverse Cohort of Individuals Recovering from COVID-19

medRxiv
2021-03-01 | Preprint
DOI: 10.1101/2021.02.26.21252308
Source: Self-asserted source
Saki Takahashi

Universal Polymerase Chain Reaction and Antibody Testing Demonstrate Little to No Transmission of Severe Acute Respiratory Syndrome Coronavirus 2 in a Rural Community

Open Forum Infectious Diseases
2021-01-01 | Journal article
DOI: 10.1093/ofid/ofaa531
Source: Self-asserted source
Saki Takahashi
grade
Preferred source (of 2)‎

Are Seroprevalence Estimates for Severe Acute Respiratory Syndrome Coronavirus 2 Biased?

The Journal of Infectious Diseases
2020-11-09 | Journal article
DOI: 10.1093/infdis/jiaa523
Source: Self-asserted source
Saki Takahashi
grade
Preferred source (of 2)‎

Seroepidemiologic Study Designs for Determining SARS-COV-2 Transmission and Immunity

Emerging Infectious Diseases
2020-09 | Journal article
DOI: 10.3201/eid2609.201840
Source: Self-asserted source
Saki Takahashi

Are SARS-CoV-2 seroprevalence estimates biased?

2020-05-30 | Other
DOI: 10.31219/osf.io/y3fxt
Contributors: Saki Takahashi; Bryan Greenhouse; Isabel Rodríguez-Barraquer
Source: check_circle
Crossref

Using models to shape measles control and elimination strategies in low- and middle-income countries: A review of recent applications

Vaccine
2020-01 | Journal article
DOI: 10.1016/j.vaccine.2019.11.020
Source: Self-asserted source
Saki Takahashi

Mapping vaccination coverage to explore the effects of delivery mechanisms and inform vaccination strategies

Nature Communications
2019-12 | Journal article
DOI: 10.1038/s41467-019-09611-1
Source: Self-asserted source
Saki Takahashi
grade
Preferred source (of 2)‎

A spatial regression model for the disaggregation of areal unit based data to high-resolution grids with application to vaccination coverage mapping

Statistical Methods in Medical Research
2019-11 | Journal article
DOI: 10.1177/0962280218797362
Source: Self-asserted source
Saki Takahashi

The impact of reactive mass vaccination campaigns on measles outbreaks in the Katanga region, Democratic Republic of Congo

medRxiv
2019-08-17 | Preprint
DOI: 10.1101/19003434
Source: Self-asserted source
Saki Takahashi
grade
Preferred source (of 2)‎

Seasonal gaps in measles vaccination coverage in Madagascar

Vaccine
2019-04 | Journal article
DOI: 10.1016/j.vaccine.2019.02.069
Source: Self-asserted source
Saki Takahashi

Epidemic dynamics, interactions and predictability of enteroviruses associated with hand, foot and mouth disease in Japan

Journal of The Royal Society Interface
2018-09 | Journal article
DOI: 10.1098/rsif.2018.0507
Source: Self-asserted source
Saki Takahashi
grade
Preferred source (of 2)‎

Challenges and Opportunities in Disease Forecasting in Outbreak Settings: A Case Study of Measles in Lola Prefecture, Guinea

The American Journal of Tropical Medicine and Hygiene
2018-05-09 | Journal article
DOI: 10.4269/ajtmh.17-0218
Source: Self-asserted source
Saki Takahashi

High resolution age-structured mapping of childhood vaccination coverage in low and middle income countries

Vaccine
2018-03 | Journal article
DOI: 10.1016/j.vaccine.2018.02.020
Source: Self-asserted source
Saki Takahashi

The seasonality of nonpolio enteroviruses in the United States: Patterns and drivers

Proceedings of the National Academy of Sciences
2018-03-20 | Journal article
DOI: 10.1073/pnas.1721159115
Source: Self-asserted source
Saki Takahashi

The geography of measles vaccination in the African Great Lakes region

Nature Communications
2017-08 | Journal article
DOI: 10.1038/ncomms15585
Source: Self-asserted source
Saki Takahashi

Demographics, epidemiology and the impact of vaccination campaigns in a measles-free world – Can elimination be maintained?

Vaccine
2017-03 | Journal article
DOI: 10.1016/j.vaccine.2017.02.008
Source: Self-asserted source
Saki Takahashi

Hand, Foot, and Mouth Disease in China: Critical Community Size and Spatial Vaccination Strategies

Scientific Reports
2016-04 | Journal article
DOI: 10.1038/srep25248
Source: Self-asserted source
Saki Takahashi

Routine Pediatric Enterovirus 71 Vaccination in China: a Cost-Effectiveness Analysis

PLOS Medicine
2016-03-15 | Journal article
DOI: 10.1371/journal.pmed.1001975
Source: Self-asserted source
Saki Takahashi

Hand, Foot, and Mouth Disease in China: Modeling Epidemic Dynamics of Enterovirus Serotypes and Implications for Vaccination

PLOS Medicine
2016-02-16 | Journal article
DOI: 10.1371/journal.pmed.1001958
Source: Self-asserted source
Saki Takahashi

Transport networks and inequities in vaccination: remoteness shapes measles vaccine coverage and prospects for elimination across Africa

Epidemiology and Infection
2015-05 | Journal article
DOI: 10.1017/s0950268814001988
Source: Self-asserted source
Saki Takahashi

Reduced vaccination and the risk of measles and other childhood infections post-Ebola

Science
2015-03-13 | Journal article
DOI: 10.1126/science.aaa3438
Source: Self-asserted source
Saki Takahashi

Estimating Incidence Curves of Several Infections Using Symptom Surveillance Data

PLoS ONE
2011-08-24 | Journal article
DOI: 10.1371/journal.pone.0023380
Source: Self-asserted source
Saki Takahashi

Predicting the Epidemic Sizes of Influenza A/H1N1, A/H3N2, and B: A Statistical Method

PLoS Medicine
2011-07-05 | Journal article
DOI: 10.1371/journal.pmed.1001051
Source: Self-asserted source
Saki Takahashi
How many people are using ORCID?