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Loop profile: 252098

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Employment (5)

Scribe Therapeutics: Alameda, US

2022 to present | Bioinformatics Scientist (Technology Platform)
Employment
Source: Self-asserted source
Amanda Mok

University of California, Berkeley: Berkeley, US

2014 to 2022 | Graduate Student Researcher (Center for Computational Biology)
Employment
Source: Self-asserted source
Amanda Mok

Broad Institute: Cambridge, MA, US

2011 to 2014 | Research Associate (Medical and Population Genetics)
Employment
Source: Self-asserted source
Amanda Mok

INSERM: Paris, Île-de-France, FR

2010-05 to 2010-08 | Intern (U676)
Employment
Source: Self-asserted source
Amanda Mok

Massachusetts Institute of Technology: Cambridge, MA, US

2008 to 2010 | Undergraduate Researcher (Biological Engineering)
Employment
Source: Self-asserted source
Amanda Mok

Education and qualifications (4)

University of California Berkeley: Berkeley, CA, US

2016 to 2022 | PhD (Center for Computational Biology)
Education
Source: Self-asserted source
Amanda Mok

University of California Berkeley School of Public Health: Berkeley, CA, US

2014 to 2016 | MPH (Epidemiology/Biostatistics)
Education
Source: Self-asserted source
Amanda Mok

Massachusetts Institute of Technology: Cambridge, MA, US

2007 to 2011 | SB (Biological Engineering)
Education
Source: Self-asserted source
Amanda Mok

Massachusetts Institute of Technology: Cambridge, MA, US

2007 to 2011 | SB (Music and Theater Arts)
Education
Source: Self-asserted source
Amanda Mok

Funding (1)

Biomedical Big Data Training Program at UC Berkeley

2016-04-01 to 2021-03-31 | Grant
United States National Library of Medicine (n/a, US)
URL: https://grants.uberresearch.com/100000092/T32LM012417/Biomedical-Big-Data-Training-Program-at-UC-Berkeley
GRANT_NUMBER: grant.T32LM012417
Source: Self-asserted source
Amanda Mok via DimensionsWizard

Works (12)

Streamlined and sensitive mono- and di-ribosome profiling in yeast and human cells

Nature Methods
2023-11 | Journal article
DOI: 10.1038/s41592-023-02028-1
Contributors: Lucas Ferguson; Heather E. Upton; Sydney C. Pimentel; Amanda Mok; Liana F. Lareau; Kathleen Collins; Nicholas T. Ingolia
Source: check_circle
Crossref

choros: correction of sequence-based biases for accurate quantification of ribosome profiling data

2023-02-22 | Preprint
DOI: 10.1101/2023.02.21.529452
Contributors: Amanda Mok; Robert Tunney; Gonzalo Benegas; Edward W. J. Wallace; Liana F. Lareau
Source: check_circle
Crossref

riboviz 2: a flexible and robust ribosome profiling data analysis and visualization workflow

Bioinformatics
2022-04-12 | Journal article
DOI: 10.1093/bioinformatics/btac093
Contributors: Alexander L Cope; Felicity Anderson; John Favate; Michael Jackson; Amanda Mok; Anna Kurowska; Junchen Liu; Emma MacKenzie; Vikram Shivakumar; Peter Tilton et al.
Source: check_circle
Crossref

Accelerated RNA detection using tandem CRISPR nucleases

Nature Chemical Biology
2021-08-05 | Journal article
DOI: 10.1038/s41589-021-00842-2
Part of ISSN: 1552-4450
Part of ISSN: 1552-4469
Source: Self-asserted source
Amanda Mok

riboviz 2: A flexible and robust ribosome profiling data analysis and visualization workflow

2021-05-17 | Other
DOI: 10.1101/2021.05.14.443910
Contributors: Alexander L. Cope; Felicity Anderson; John Favate; Michael Jackson; Amanda Mok; Anna Kurowska; Emma MacKenzie; Vikram Shivakumar; Peter Tilton; Sophie M. Winterbourne et al.
Source: check_circle
Crossref

Rapid detection of SARS-CoV-2 with Cas13

2020-12-16 | Other
DOI: 10.1101/2020.12.14.20247874
Contributors: Shreeya Agrawal; Alison Fanton; Sita S. Chandrasekaran; Noam Prywes; Maria Lukarska; Scott B. Biering; Dylan C. J. Smock; Amanda Mok; Gavin J. Knott; Erik Van et al.
Source: check_circle
Crossref

Nitric Oxide Engages an Anti-inflammatory Feedback Loop Mediated by Peroxiredoxin 5 in Phagocytes

Cell Reports
2018-07 | Journal article
DOI: 10.1016/j.celrep.2018.06.081
Part of ISSN: 2211-1247
Source: Self-asserted source
Amanda Mok

Hypomethylation of CYP2E1 and DUSP22 Promoters Associated With Disease Activity and Erosive Disease Among Rheumatoid Arthritis Patients

Arthritis & Rheumatology
2018-04 | Journal article
DOI: 10.1002/art.40408
Contributors: Amanda Mok; Brooke Rhead; Calliope Holingue; Xiaorong Shao; Hong L. Quach; Diana Quach; Elizabeth Sinclair; Jonathan Graf; John Imboden; Thomas Link et al.
Source: check_circle
Crossref

Mendelian randomization shows a causal effect of low vitamin D on multiple sclerosis risk

2016 | Journal article
DOI: 10.1212/Correspondence
PMID: 27652346
ISBN: 0000000000000
Source: Self-asserted source
Amanda Mok

Genome-wide profiling identifies associations between lupus nephritis and differential methylation of genes regulating tissue hypoxia and type 1 interferon responses

Lupus Sci. Med.
2016-12 | Journal article
DOI: 10.1136/lupus-2016-000183
Source: Self-asserted source
Amanda Mok

Functional genomics identifies negative regulatory nodes controlling phagocyte oxidative burst.

Nat. Commun.
2015-01 | Journal article
DOI: 10.1038/ncomms8838
PMID: 26194095
Source: Self-asserted source
Amanda Mok

Neuroprotective effects of NAP against excitotoxic brain damage in the newborn mice: implications for cerebral palsy

Neuroscience
2011-01 | Journal article
DOI: 10.1016/j.neuroscience.2010.10.074
Contributors: P. Sokolowska; S. Passemard; A. Mok; L. Schwendimann; I. Gozes; P. Gressens
Source: Self-asserted source
Amanda Mok via Crossref Metadata Search
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