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Scopus Author ID: 6602632841

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Works (17)

VISTA Enhancer browser: an updated database of tissue-specific developmental enhancers

Nucleic Acids Research
2025-01-06 | Journal article
DOI: 10.1093/nar/gkae940
Contributors: Michael Kosicki; Fotis A Baltoumas; Guy Kelman; Joshua Boverhof; Yeongshnn Ong; Laura E Cook; Diane E Dickel; Georgios A Pavlopoulos; Len A Pennacchio; Axel Visel
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Crossref

ChromBPNet: bias factorized, base-resolution deep learning models of chromatin accessibility reveal cis-regulatory sequence syntax, transcription factor footprints and regulatory variants

2024-12-25 | Preprint
DOI: 10.1101/2024.12.25.630221
Contributors: Anusri Pampari; Anna Shcherbina; Evgeny Z. Kvon; Michael Kosicki; Surag Nair; Soumya Kundu; Arwa S. Kathiria; Viviana I. Risca; Kristiina Kuningas; Kaur Alasoo et al.
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Crossref

Molecular convergence of risk variants for congenital heart defects leveraging a regulatory map of the human fetal heart

2024-11-21 | Preprint
DOI: 10.1101/2024.11.20.24317557
Contributors: X. Rosa Ma; Stephanie D. Conley; Michael Kosicki; Danila Bredikhin; Ran Cui; Steven Tran; Maya U. Sheth; Wei-Lin Qiu; Sijie Chen; Soumya Kundu et al.
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Crossref

Mutagenesis Sensitivity Mapping of Human Enhancers In Vivo

2024-09-08 | Preprint
DOI: 10.1101/2024.09.06.611737
Contributors: Michael Kosicki; Boyang Zhang; Anusri Pampari; Jennifer A Akiyama; Ingrid Playzer-Frick; Catherine S Novak; Stella Tran; Yiwen Zhu; Momoe Kato; Riana D Hunter et al.
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Crossref

Massively parallel reporter assays and mouse transgenic assays provide complementary information about neuronal enhancer activity

2024-04-23 | Preprint
DOI: 10.1101/2024.04.22.590634
Contributors: Michael Kosicki; Dianne Laboy Cintrón; Nicholas F. Page; Ilias Georgakopoulos-Soares; Jennifer A. Akiyama; Ingrid Plajzer-Frick; Catherine S. Novak; Momoe Kato; Riana D. Hunter; Kianna von Maydell et al.
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Crossref

Rare variation in noncoding regions with evolutionary signatures contributes to autism spectrum disorder risk

2023-09-22 | Preprint
DOI: 10.1101/2023.09.19.23295780
Contributors: Taehwan Shin; Janet H.T. Song; Michael Kosicki; Connor Kenny; Samantha G. Beck; Lily Kelley; Xuyu Qian; Julieta Bonacina; Frances Papandile; Irene Antony et al.
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Crossref

The interplay of DNA repair context with target sequence predictably biasses Cas9-generated mutations

2023-06-28 | Preprint
DOI: 10.1101/2023.06.28.546891
Contributors: Ananth Pallaseni; Elin Madli Peets; Gareth Girling; Luca Crepaldi; Ivan Kuzmin; Uku Raudvere; Hedi Peterson; Özdemirhan Serçin; Balca R. Mardin; Michael Kosicki et al.
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Crossref

Cell Type- and Tissue-specific Enhancers in Craniofacial Development

2023-06-26 | Preprint
DOI: 10.1101/2023.06.26.546603
Contributors: Sudha Sunil Rajderkar; Kitt Paraiso; Maria Luisa Amaral; Michael Kosicki; Laura E. Cook; Fabrice Darbellay; Cailyn H. Spurrell; Marco Osterwalder; Yiwen Zhu; Han Wu et al.
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Crossref

Chondrogenic Enhancer Landscape of Limb and Axial Skeleton Development

2023-05-11 | Preprint
DOI: 10.1101/2023.05.10.539849
Contributors: Fabrice Darbellay; Anna Ramisch; Lucille Lopez-Delisle; Michael Kosicki; Axel Visel; Guillaume Andrey
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Crossref

Genome-wide fetalization of enhancer architecture in heart disease

Cell Reports
2022-09 | Journal article
DOI: 10.1016/j.celrep.2022.111400
Contributors: Cailyn H. Spurrell; Iros Barozzi; Michael Kosicki; Brandon J. Mannion; Matthew J. Blow; Yoko Fukuda-Yuzawa; Neil Slaven; Sarah Y. Afzal; Jennifer A. Akiyama; Veena Afzal et al.
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Crossref

Cas9-induced large deletions and small indels are controlled in a convergent fashion

Nature Communications
2022-06-14 | Journal article
DOI: 10.1038/s41467-022-30480-8
Part of ISSN: 2041-1723
Source: Self-asserted source
Michael Kosicki

Predicting the mutations generated by repair of Cas9-induced double-strand breaks.

Nature biotechnology
2018-11 | Journal article
DOI: 10.1038/nbt.4317
PMID: 30480667
Contributors: Allen F; Crepaldi L; Alsinet C; Strong AJ; Kleshchevnikov V; De Angeli P; Páleníková P; Khodak A; Kiselev V; Kosicki M et al.
Source: Self-asserted source
Michael Kosicki via Europe PubMed Central

Inter-homologue repair in fertilized human eggs?

Nature
2018-08 | Journal article
DOI: 10.1038/s41586-018-0379-5
Part of ISSN: 0028-0836
Contributors: Dieter Egli; Michael V. Zuccaro; Michael Kosicki; George M. Church; Allan Bradley; Maria Jasin
Source: Self-asserted source
Michael Kosicki via Crossref Metadata Search

Repair of double-strand breaks induced by CRISPR–Cas9 leads to large deletions and complex rearrangements

Nature Biotechnology
2018-07 | Journal article
DOI: 10.1038/nbt.4192
Part of ISSN: 1087-0156
Contributors: Michael Kosicki; Kärt Tomberg; Allan Bradley
Source: Self-asserted source
Michael Kosicki via Crossref Metadata Search

Dynamics of Indel Profiles Induced by Various CRISPR/Cas9 Delivery Methods.

Progress in molecular biology and translational science
2017 | Journal article
DOI: 10.1016/bs.pmbts.2017.09.003
PMID: 29150004
Source: Self-asserted source
Michael Kosicki via Europe PubMed Central

FoxA1 directs the lineage and immunosuppressive properties of a novel regulatory T cell population in EAE and MS.

2014-03 | Journal article
DOI: 10.1038/nm.3485
PMID: 24531377
Contributors: Liu Y; Carlsson R; Comabella M; Wang J; Kosicki M; Carrion B; Hasan M; Wu X; Montalban X; Dziegiel MH et al.
Source: Self-asserted source
Michael Kosicki via Europe PubMed Central
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In vitro activity and function of B7-H4-Ig fusion protein

Open Journal of Immunology
2013 | Journal article
DOI: 10.4236/oji.2013.31004
Source: Self-asserted source
Michael Kosicki
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